Achromobacter spanius: CVS48_22220
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Entry
CVS48_22220 CDS
T05274
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
asw
Achromobacter spanius
Pathway
asw03420
Nucleotide excision repair
asw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
asw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CVS48_22220
03430 Mismatch repair
CVS48_22220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asw03400
]
CVS48_22220
Enzymes [BR:
asw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CVS48_22220
DNA repair and recombination proteins [BR:
asw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CVS48_22220
MMR (mismatch excision repair)
Other MMR factors
CVS48_22220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
Viral_helicase1
T7SS_EccA1_N
Motif
Other DBs
NCBI-ProteinID:
AUA58490
LinkDB
All DBs
Position
complement(4926341..4928635)
Genome browser
AA seq
764 aa
AA seq
DB search
MMLEKLNPEQRAAVTLEPQHALVLAGAGSGKTRVLTTRMAWLIQTGQASPFGLLAVTFTN
KAAREMLARMSAILPIDTRGLWIGTFHGLCNRMLRAHHRDAGLPQSFQILDVTDQLAAIK
RLMKANGVDDEKYPPRDVQRFINGAKEEGLRPQDVEAYDAHRRRLIEIYQLYEAQCQREG
VVDFAELLLRAYELLSRNAPVREHYQRRFRHILVDEFQDTNTLQYKWLRLLAGGGAAMFA
VGDDDQSIYAFRGANVGNMSDFERDYAHGTVIRLEQNYRSFGHILDSANALIGHNSGRLG
KNLWTDQGEGEPVRVIEQPSDGMEAQWIVDEIRSLIHDGSLRREIAVLYRSNAQSRVIEH
AIFSAGIPYKVYGGLRFFERQEIKHALAYLRLMANPHDDTSWMRVVNFPTRGIGARTLEQ
LADAARAHDTSLYGAVALVGGKGGSNLAQFAQLIHRLIEETRDLPLPEMVEHMLETSGLN
AHYKAEREGAERLENLNELITAAAVFASEENYDGMPAGVVPEQAASSTLMPGVVDAPIVA
SDGLTPLAGFLSHAALEAGDNQAQQGQDAVQLMTVHAAKGLEFDAVFITGLEEGLFPHEN
SILEQSGLEEERRLMYVAITRARQRLYISLAQSRMLHGQTRYAMRSRFLDEIPEEHLKWL
SPKAGLAPLSSTGAGWGGGNRGDAFGRKATNTIAPRQPRGIASGVTVGDKQYRVGQGVHH
ARFGDGTIIGLSGAGQDAQAEIQFRDVGAKTLALGIAKLDIVQG
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgatgctagagaagctcaaccctgaacaacgcgccgcagtaacgttagaaccgcagcac
gccctggtcttggccggggcgggcagcgggaagacccgggtactcactacccgcatggcc
tggctgattcaaaccggccaggcctcgccttttgggctgctggcagtcacgttcaccaat
aaggccgcccgcgaaatgctggcgcgtatgtcggcgattttgccgattgatacgcgcggc
ttgtggatcggcacttttcacggcctgtgcaaccgcatgctgcgcgcgcatcaccgcgac
gccggcttgccgcagagcttccagatcctggatgtcaccgaccagcttgccgccatcaag
cgcctgatgaaggccaatggcgtcgacgacgaaaagtatccgccgcgtgacgtgcagcgc
ttcatcaacggcgccaaggaagaaggccttcgtccgcaagacgtcgaggcctacgacgcc
catcgccgccgcctgatcgagatctatcagctttacgaagctcagtgccagcgcgaaggc
gtggtcgacttcgccgagctgctgctgcgcgcctatgaactgctgtcgcgcaatgcgccg
gtacgcgagcattaccagcgccgcttccgccacatcctggtggacgagttccaggacacc
aacacgctgcaatacaagtggctgcgcctgctggccggcggtggcgcggcgatgttcgcc
gtgggcgacgacgaccagtccatctacgcctttcgcggcgcgaacgtcggcaacatgtcc
gacttcgagcgcgactacgcgcacggcaccgtgatccgcctggaacagaactaccgttcg
ttcggccacattctggattccgccaacgcactcatcggccacaacagcggccgcctgggc
aagaacctgtggacggaccagggcgaaggcgaaccggtgcgtgtcatcgaacagccttcc
gacggcatggaagcccaatggatcgtggacgaaatccgttcgctcatccatgacggcagc
ctgcgccgcgagatcgccgtgctctaccgcagtaacgcgcaatcccgcgtgatcgagcac
gccatcttctcggccggcattccgtacaaggtgtatggcggcctgcgcttcttcgaacgc
caggaaatcaagcacgcgctggcatatttgcgcttgatggccaacccgcacgacgacacc
tcgtggatgcgcgtcgtcaatttcccgacgcgcggtattggtgcgcgtacgctggagcaa
ctggccgacgcggcccgcgcgcacgacaccagcctgtacggcgcggtggcgctggtgggc
ggcaagggcgggtccaacctggcccagtttgcccaactgatccatcgtctgatcgaagaa
acgcgcgaccttccgctgccggaaatggttgagcacatgcttgagaccagcggcctgaac
gcccattacaaggcggaacgcgaaggcgccgagcggctggaaaacttgaacgaactgatc
acggcggctgccgtgttcgcgtcggaagaaaactatgacggcatgcctgccggcgtggtg
cccgagcaggccgcctcgtcgacgctgatgcccggcgtggtcgacgcgcccatcgtggcg
tccgacggcttgaccccgcttgcgggcttcctgtcgcacgccgcgctggaagccggcgac
aaccaggcccagcaaggccaggacgccgtccagctcatgacggtgcatgccgccaagggg
ctggaatttgacgcggtcttcatcaccggcctggaagaggggctgttcccgcacgagaac
agcatcctggaacagtctggcttggaagaagagcgccgcctgatgtatgtggcgatcacg
cgcgcccggcagcgtctgtacatcagcctggcgcaaagccggatgctgcatggccagacg
cgctacgccatgcgctcgcgctttctggacgagattcccgaagagcatctgaagtggctg
tcccccaaggctggcctggcgccgctcagcagcacgggcgcgggttggggcggcggcaat
cgcggcgacgcatttggccgcaaggccaccaataccattgcgccgcgtcaacctcgtggc
attgcaagcggtgtcacggtgggcgacaagcagtatcgtgtgggtcagggcgtgcaccac
gcgcggtttggcgatggcacgattattggcttgagcggcgccggtcaggacgcccaggca
gaaatccagtttcgcgatgtgggcgccaagaccttggcgctgggcatcgcgaagcttgat
attgttcagggttaa
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