Achromobacter spanius: CVS48_23685
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Entry
CVS48_23685 CDS
T05274
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
asw
Achromobacter spanius
Pathway
asw03420
Nucleotide excision repair
asw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
asw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CVS48_23685
03430 Mismatch repair
CVS48_23685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asw03400
]
CVS48_23685
Enzymes [BR:
asw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CVS48_23685
DNA repair and recombination proteins [BR:
asw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CVS48_23685
MMR (mismatch excision repair)
Other MMR factors
CVS48_23685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AUA60122
LinkDB
All DBs
Position
complement(5247445..5249559)
Genome browser
AA seq
704 aa
AA seq
DB search
MSDHNPPLNSRPDPLADLNPAQREAAEFGVNVDGSLAAGDDGPLLVIAGAGSGKTNTLAH
RVAHLILNGADPQRMLLLTFSRRAAQEMDRRVGSVLQRVMNLRSSQQAPSLPWAGTFHAI
GARLLRDCALRIGLSEAFTIHDRGDAEDLMGMVRHEQGLSSTKSRFPLKGTCLAIYSRVV
NSQSSVADVLKTSFPWCAQWEDELKTLFRGYVAAKQDQQVLDYDDLLLYWAEMMSDPGIA
ADVGARFDHVLVDEYQDTNRLQSAILLAMKPDGRGLTVVGDDAQSIYSFRAATVRNILDF
PTQFPKPARVITLDRNYRSTQPILNASNAVIGLATERFAKDLWTDRASSQLPELVTVSDE
AGQARWVADQVLAQREGGATLKSQAALFRTASHSAALELELTRRNIPFVKFGGLRFLEAA
HVKDLLSLLRWAENPRGRMAGFRVAQLMPGIGPATAGKLMDAMSASAEPLRALREFKPGA
AAQQEWGAFADTYAALCDPGLRWPADVDLALRWYAGQLERLYDDARVRKTDLDQLVRLAA
GYPSRERFLTELTLDPPDATSDESGAPSRDEDYMILSTIHSAKGQEWKAVYVLNVVDGCI
PSDMSTGTAEEIEEERRLLYVAMTRAKERLQLIVPQRFYVHQQTGMGDRHVYGSRTRYIT
NAMLPLFDHLPKPPALADLPGGGAAKEPQAPAIDVTKRVRSLFS
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaccacaatccccctttgaattcccgccccgaccccttagccgacctgaacccc
gcccagcgcgaagccgccgaattcggcgtgaacgtggatgggagcctggcggcgggcgac
gatggccccttgctggtgatcgccggggcgggctcgggcaagaccaacacgctggcgcac
cgcgtcgcccacctgattcttaacggcgccgacccgcagcgcatgctgctgctgacgttt
tcgcgccgcgcggcccaggaaatggatcgtcgcgtgggcagcgtgctgcaacgggtcatg
aacctgcgcagctcgcagcaggcgccgtcgctgccgtgggcgggcaccttccacgccatc
ggcgcgcggctgctgcgcgattgcgcactgcgcatcgggctgtcggaagcgttcaccatt
cacgaccgtggcgacgccgaagacctgatgggcatggtccgccacgaacagggcctgtcg
tcgaccaagtcgcgctttcccctgaagggtacttgcctggccatctattcgcgcgtggtc
aacagccagagctcggtggccgatgtgctgaaaacctcgttcccgtggtgcgcgcaatgg
gaagacgagctgaagacgctgtttcgcggctatgtggcggccaagcaggaccagcaggtg
ctggactacgacgacctgctgctgtactgggccgagatgatgtcggacccgggcatcgcg
gcggatgtcggggcgcgcttcgaccatgtgctggtggacgaataccaggacaccaaccgc
ctgcaatccgccattctgctggccatgaaacccgacggccgaggcctgacggtggtgggc
gacgacgcgcaatccatctattcgttccgcgccgccaccgtgcgcaacatcctggatttc
ccgacgcagtttcccaagcccgcccgcgtcatcacgctggaccgcaactaccgttctacc
cagcccatcctgaacgcctccaacgcggtgatcgggctggcaacagagcgcttcgccaaa
gacctctggaccgaccgcgcgtcctcgcaattgccggaactggtgacggtcagcgacgag
gccgggcaagcgcgctgggtggccgaccaggtgctggcgcagcgcgaaggcggcgccacg
ctgaagtcgcaagccgcgttgttccgcacggccagccacagcgccgcgctggaactcgaa
ctgacccggcgcaatattcccttcgtgaaatttggcggcctgcgctttctggaagccgcg
cacgtgaaagacttgttgtcgctattgcgctgggcggaaaacccgcgcggccgcatggcg
ggctttcgcgtggcgcagttgatgcccggcatcggcccggccaccgccggcaagctgatg
gacgccatgtccgccagcgccgaaccgttgcgcgcgctgcgtgaattcaaaccgggcgcg
gcggcgcagcaggaatggggcgcgttcgccgatacctatgcggcgctgtgcgacccaggg
ctgcgttggcccgccgacgtggacctggccttgcgctggtacgccggccagctcgaacgc
ctgtatgacgacgcccgcgtgcgtaagaccgaccttgatcagttggtgcggctggcggcg
ggctacccgtcgcgcgaacgcttcctgaccgaactcacgctggatccgcccgacgccacc
agcgatgaatccggcgcgccctcgcgcgatgaggactacatgatcctgtccaccatccac
tcggccaagggccaggaatggaaggccgtctatgtgctgaacgtggtcgatggctgcatt
ccttccgacatgagcaccggcaccgccgaagagatcgaggaagaacgccgcctgctgtat
gtggccatgacgcgcgccaaggaacgcctgcaattgatcgtgccgcagcgcttctacgtg
catcagcagacgggcatgggcgaccgccacgtctacgggtcgcgcacgcgctacatcacc
aatgccatgctgccgttgtttgaccacctgcccaagccgcccgcgttggccgacctgccg
ggcggcggcgcggccaaagaaccgcaggcgcccgccatcgacgtgaccaagcgggtgcgc
agcctgttctcatag
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