Achromobacter spanius: CVS48_26170
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Entry
CVS48_26170 CDS
T05274
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
asw
Achromobacter spanius
Pathway
asw03030
DNA replication
asw03430
Mismatch repair
asw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CVS48_26170
03430 Mismatch repair
CVS48_26170
03440 Homologous recombination
CVS48_26170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asw03032
]
CVS48_26170
03400 DNA repair and recombination proteins [BR:
asw03400
]
CVS48_26170
Enzymes [BR:
asw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CVS48_26170
DNA replication proteins [BR:
asw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CVS48_26170
DNA repair and recombination proteins [BR:
asw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CVS48_26170
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
RecG_wedge
DUF7861
Motif
Other DBs
NCBI-ProteinID:
AUA59187
LinkDB
All DBs
Position
complement(5768406..5771897)
Genome browser
AA seq
1163 aa
AA seq
DB search
MSEAVTNPTPFVHLRVHSEFSVVDGIVRIPDLIKRVAKLGQPAVALTDLSNLFGLIKFYK
GARGAGVKPIAGCDVWLSNDDDPSKPFRLLLLVRNHQGYLNLCELLSKAFLTNQGKGRAE
VRREWLQGQQGLIALSGGRMGDVGQALDAGNAVSALALARQWAHLFPGSYYIELQRAGMD
GDEAYTQAAMRLAGEAGLPVVATHPVQFLDEYEFQAHEARVCIAEGEILANPRRVRRFTK
EQYLLSSEEMARRFADVPSALANTVEIAKRCNLSLVLGKPRLPNFPTPDGVTLDDYLVQL
SEEGLEKRMAFLFPDAAERESKREQYYERLRWECKTIIQMGFPGYFLIVQDFINWGKNNG
VPVGPGRGSGAGSLVAYALGITDLDPIRYDLLFERFLNPERVSMPDFDIDFCQDNRERVI
DYVKEKYGRAAVSQIATFGTLGAKAVVRDAGRVLDMPYMFCDGLSKLIPFNPMDPWTLER
TLKDEPAFKDRYEQEEEVRALVDLAKPLEGLTRNIGMHAGGVLIAPGKLTDFCPLYCQPG
QENSAVSQFDKDDVEAAGLVKFDFLGLRNLTILDWAVRYVRQFNEDKRDFDVMALELDDP
AAYKILCDANTTAVFQLESRGMKELLKKLRPNTFEDIIAMLALYRPGPLESGMVDDFVNR
KHGRAAVDYFHNDLESTLKSTYGVIVYQEQVMLISQIIGGYSLGGADLLRRAMGKKKPEE
MAKHRELFEQGAKEKGHDPDLAVKLFDLMEKFAGYGFNKSHSAAYALISYQTAWLKAYHP
TEFLAATMSSDMDDTDKVQIFCRDAQDNGVEVLPPDVNFSGYRFEPVKDKYTEKGKPPRT
MRYGLGAVKGTGQGAVEDILRARKEGGPFLNLFDFCRRVGKQAVNRRTIEALIKAGAFDT
IEPNRAAMLASVPTAMEAAEQAARSANQASLFGDDSGDVVAGELAKVAPWDLHKKLTEEK
SALGYYYSGHLFDAWRDEVRRIVPMQLARVEPQRDLQWMCGVLASVRVMMTRRGKMVFAV
LDDGTAQVEISVFNELYEKHRNRLREDQLVIVQGKVSNDDYSGGMRIVAEQLYDLQLARE
ARAKSLRVKLNGSADAARLRQMLNPFRAEPENGIPGVPVDIVYTKNNYHCTVRLGEEWRV
RMADTLLENLNAWTKPDGVEVTY
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagccgtaacaaacccgaccccctttgtgcatctgcgtgtccactccgagttt
tcggtggtggacggtattgtgcgcattcccgacctgatcaagcgcgtggccaagctgggc
cagcccgccgtggcgctgaccgacctgtccaaccttttcggcctgatcaagttctacaaa
ggcgcacgcggcgcgggggtcaaacccattgccggctgtgatgtctggttgagcaatgat
gatgacccgtccaagccgttccgcttgctgttgctggtgcgcaaccatcagggctatctg
aacctgtgcgagctgctgtccaaggcgttcctgacgaaccagggcaagggccgcgcggag
gtccgtcgggaatggctgcaaggccagcagggcctgatcgcactgtcgggcggccgcatg
ggcgacgtcggccaggccctggacgcgggcaacgcggtgtcggcgctggcgttggcgcgc
caatgggcgcatctgttcccaggcagctactacattgaattgcagcgcgccggcatggac
ggcgacgaagcctacacgcaggccgccatgcggctggcgggcgaagccggcctgccggtg
gtggccacgcaccccgttcaattcctggacgaatacgaatttcaggcgcacgaggcccgc
gtctgcatcgccgaaggcgaaatcctggccaacccgcgccgcgtgcgccgcttcaccaaa
gagcagtacctgctcagttccgaggaaatggcgcgccgcttcgccgacgtgccctcggcg
ctggccaacacggttgaaatcgccaagcgctgcaacctgagcctggtgctgggcaagccg
cgcctgcccaacttccccacgcccgacggcgtaacgctggacgactacctggtccagttg
tcggaagagggcctggaaaagcgcatggcgttcctgttcccggacgctgccgaacgcgaa
tccaagcgcgagcagtactacgagcgcctgcgctgggaatgcaagaccatcatccagatg
ggcttcccgggctacttcctgatcgttcaggacttcatcaactggggcaagaacaacggc
gtgcccgtgggcccgggccggggctcgggcgcggggtcgctggtggcctacgcgctgggc
atcaccgacctggaccccatccgctatgacttgctgttcgagcgcttcctgaacccagaa
cgggtctccatgcccgacttcgatatcgatttctgccaggacaaccgcgaacgggtcatc
gactacgtcaaggaaaagtacggccgcgccgccgtgagccagatcgccaccttcggcacg
ctgggcgccaaggccgtggtgcgtgacgccggccgcgtgctggacatgccctatatgttc
tgcgacggcctgtccaagctgatcccgttcaacccgatggacccctggacgctggaacgc
accctgaaggacgaacccgccttcaaggaccgctacgaacaggaagaagaagtgcgcgcg
ctggtcgacctggccaagccgctggaaggcctgacccgcaacatcggcatgcacgcgggc
ggcgtgctgatcgcgcccggcaagctgacggatttctgcccgctgtattgccagccgggt
caggaaaacagcgcggtgtcgcagttcgacaaggacgacgtcgaagccgccggcctggtc
aagttcgacttcctgggcctgcgcaacctgaccatcctggactgggccgtgcgctacgtg
cgccagttcaacgaggacaagcgcgacttcgatgtcatggcgcttgaactggacgacccg
gccgcctacaagatcctgtgcgacgccaacaccactgccgtgttccagctggaatcgcgc
ggcatgaaagagctgctgaagaagctgcggccgaacacgttcgaagacatcatcgccatg
ctggccctgtatcgtccggggccgctggaatcaggcatggtggacgacttcgtcaaccgc
aagcacggccgcgccgcggtggactatttccacaacgacctggaaagcacgctgaagagc
acctacggggtcatcgtctaccaagaacaggtgatgctgatctcgcagatcatcgggggc
tattcgctgggtggcgccgacctgttgcgccgcgccatgggcaagaaaaagcccgaagaa
atggccaagcaccgcgagttgttcgaacagggcgccaaggaaaagggccacgacccggac
ctggcggtcaagctgttcgacctgatggaaaagttcgcgggctacggcttcaacaagtcg
cactcggccgcctacgcgctgatttcgtaccagaccgcctggctcaaggcctatcacccc
accgaattcctggccgccaccatgtcgtccgatatggacgacacggacaaggtgcagatt
ttctgccgcgatgcccaggacaacggcgttgaagtgttgccgcccgatgtcaatttttcg
ggctaccgcttcgaaccggtcaaggacaagtacaccgaaaaaggcaagccgccgcgcacc
atgcgttatggcctgggcgccgtcaagggcacggggcagggcgcggtcgaagacattctg
cgcgcccgcaaggaaggcggcccgttcctgaacctgttcgacttctgccgccgcgtgggc
aagcaggcggtgaaccgccgcaccatcgaggcgctgatcaaggcgggcgcgttcgacacc
atcgagcccaaccgcgccgcgatgctggcgtcggtgcccaccgccatggaagctgcggaa
caggccgcgcgcagcgccaaccaggcttcgctgttcggtgacgacagtggtgacgtcgtc
gcgggcgaactggccaaggtggcgccctgggacctgcacaagaagctgacggaagaaaaa
tccgcgctgggctactactacagcggccacctgttcgacgcctggcgcgacgaagtgcgc
cgcatcgtgccgatgcagttggcgcgcgtggaaccgcagcgcgatctgcaatggatgtgc
ggcgtgctggccagcgtgcgcgtcatgatgacgcggcgcggcaagatggtgtttgccgtg
ctggatgacggcaccgcgcaggtcgagatctcggtgttcaacgagctctacgaaaagcat
cgcaaccggttgcgcgaagaccaactcgtcatcgtgcagggcaaggtcagcaatgacgac
tactccggcggcatgcgcatcgtggccgagcaactgtacgacctgcaactggcccgcgaa
gcgcgcgccaagtcgttgcgcgtcaagctcaatggctcggccgacgccgcccgtttgcgc
cagatgctgaacccgttccgggctgaacccgagaacggcattccgggcgtgcccgtcgat
atcgtctacaccaagaataattaccattgcaccgtccggctgggcgaagagtggcgcgta
cgcatggccgacacgctgctggaaaacctgaatgcctggaccaaacccgacggagttgag
gtgacctattga
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integrated database retrieval system
