Achromobacter spanius: CVS48_27120
Help
Entry
CVS48_27120 CDS
T05274
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
asw
Achromobacter spanius
Pathway
asw03030
DNA replication
asw03410
Base excision repair
asw03420
Nucleotide excision repair
asw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CVS48_27120
03410 Base excision repair
CVS48_27120
03420 Nucleotide excision repair
CVS48_27120
03440 Homologous recombination
CVS48_27120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asw03032
]
CVS48_27120
03400 DNA repair and recombination proteins [BR:
asw03400
]
CVS48_27120
Enzymes [BR:
asw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CVS48_27120
DNA replication proteins [BR:
asw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CVS48_27120
DNA repair and recombination proteins [BR:
asw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CVS48_27120
NER (nucleotide excision repair)
GGR (global genome repair) factors
CVS48_27120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AUA59353
LinkDB
All DBs
Position
complement(5966733..5969450)
Genome browser
AA seq
905 aa
AA seq
DB search
MKKTLLLVDGSSYLYRAFHAMPDLRNAQGEPTGALYGVVNMLRKLVSDHKAEYAACIFDA
RGKTFRDDLYPEYKSHRPPMPEDLAAQIEPIHRAVRALGWPVLAIEGVEADDVIGTLAKH
AAEHDVHTIVSTGDKDLAQLVNSHVTLVNTMTGEVLDEPGVVNKFGVPPDRIVDYLMLVG
DTVDNVPGVTKVGPKTAVKWLAEFGSIDKLVEGAEGIKGVAGNNLREAIPNFPLTRQLLT
VKYDCDLSGHVENVSDLTPRERDIATLTELYERYGFRTWLRDLTGDAERVPTGDARIAAE
VPQAPAELDYRIIADWAEFDAWFEKLQGAPLVALDTETTSLDQMQARLVGLSLAVEPGVA
CYIPVAHRGPDGATQLPKAEVLARLKPWLEDTSRAKLLHHAKYDAHVFANEGIKLAGITD
DTMLEAYVLESHRGVGLNDLAQRYLGRSGVSYEDLCGKGAKQIGFDEVAVDKAGHYAAED
ADFTLQLHRVLRPMVASDEGLDRIYQLEIKVSAVLTTIERNGVKVDADELGRQSHKLGQE
MLRLEQKAYELAGQPFNLNSPKQLGEILFERMQLPVVRKTASGAPSTDEDVLTKLALDYP
LPQVLLEYRGLSKLKSTYTDKLPRMINPATGRVHTRYSQAAVITGRLASSDPNLQNIPVR
TEAGRRVREAFIAEQGMLLSADYSQIELRIMAHVSDDANLQRAFAAGEDIHRATAAEVFG
VALPDVSTDQRRAAKAINFGLIYGMGVFGLASNLGITRDAAQAYIDRYFARYPGVAMYME
NTRRVAREQGYVETVFGRRLQLPEIRGASGPRRQGAERAAINAPMQGTAADLIKLAMVAV
QDWLEAEKLQTRMIMQVHDELVLEAPDAEIEVVKEALPRLMCSVAELRVPLVAEVGMGKN
WEQAH
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaccttattactggtcgacggttcaagctacttgtaccgcgctttccacgct
atgcctgatttgcgcaatgcgcaaggcgaacccacgggggcgctgtacggcgtggtcaat
atgctgcgcaagcttgtatctgatcataaggcagagtatgccgcatgtattttcgatgcc
cgcggcaagaccttccgagacgacctgtatcccgagtacaagtcgcaccgcccgcccatg
cctgaagacctggctgcgcagatcgaacccatccaccgcgccgtgcgcgcgctgggttgg
ccggtgctggccattgagggggtggaagcggacgacgtgatcggcaccctggccaagcac
gccgccgaacacgatgtacacaccatcgtttccacgggcgacaaggacttggcgcaactg
gtcaacagccacgtcacgctggtcaacaccatgacgggcgaagtgctggacgagcccggc
gtggtcaataagtttggcgtgccgcccgaccgcatcgtcgactacctgatgctggttggc
gataccgtggacaacgtcccgggggtgaccaaggtgggtcccaagacggcggtcaaatgg
ctggcggaattcggctccattgacaagctggtcgaaggcgccgagggcatcaagggcgtg
gccggcaacaacctgcgcgaagccattcccaatttcccgctgacccgccaactgctgacg
gtgaaatacgattgcgacctgagcggccacgtggaaaacgtcagcgacctgacgccgcgc
gaacgcgacattgccacgctgaccgaactatatgaacgctacggcttccgtacctggctg
cgcgacctgaccggcgacgccgagcgcgtgcccacgggtgatgcgcgcatcgctgcggaa
gtgccgcaggcgccagccgaactggactaccggatcattgccgactgggccgaattcgac
gcctggtttgaaaagctgcaaggggcgcccctggtggcgctggacaccgagactacatcg
ctggaccagatgcaggcccggctggttggcctgtcgctggcggtggaacctggcgtggct
tgctacattccggtggcgcaccgggggccggacggcgcaacgcagttgcccaaggccgag
gtgctggcgcgcttgaagccgtggctggaagacacctcgcgcgccaagctgctgcatcac
gccaagtacgacgcgcatgtgttcgccaacgaaggcatcaagcttgcgggcattaccgac
gacacgatgcttgaggcctatgtgctggaatcgcatcgcggcgtggggctcaacgacctg
gcccagcgctatctgggccgcagcggcgtgtcgtacgaggacctgtgcggcaagggcgcc
aagcagatcggtttcgacgaggtggcggtggacaaggcggggcattacgccgccgaagac
gccgacttcaccttgcaattgcatcgcgtgctgcgtccgatggtggcgtccgacgaaggc
ctggaccgcatctatcaattggaaatcaaggtgtcggcggtgctgaccaccatcgaacgc
aatggcgtgaaggtggatgccgacgaactcggccgccaaagccacaagctgggccaggaa
atgttgcggctggagcaaaaggcctatgaattggccggtcagcccttcaacctgaattcg
cccaagcagttgggtgaaattctgtttgagcgcatgcagttgccggtggtgcgcaagacc
gccagcggcgcgccgtccaccgacgaagacgtgctgaccaagctggcgctggactatccg
ctgccgcaggtgctgctggaataccgggggctgtccaagctgaagtccacctacacggac
aagctgccgcgcatgatcaaccccgccacgggccgtgtccacacgcgctactcgcaggcg
gcggtgattaccggccggctggcgtcgtccgatcccaacctgcagaacattcccgtgcgc
accgaggcgggccgccgtgtgcgcgaggcgttcatcgcggaacagggcatgctgctgtcg
gccgactattcgcagattgaactgcgcatcatggcgcacgtgtcggacgacgccaatctg
caacgcgcgtttgccgccggcgaggacattcaccgcgcgacggccgccgaagtgttcggc
gtggcgctgccggatgtgtcgaccgaccagcgtcgcgcggccaaggccatcaactttggc
ctgatctacggcatgggggtgttcggcctggcgtccaacctgggcatcacgcgggatgcg
gcgcaggcctacatcgaccgctatttcgcccgctatcccggcgtggcgatgtacatggaa
aacacgcgccgcgtcgcgcgcgagcaaggttacgttgaaaccgtgttcggtcggcgcctg
caactgccggaaatccgtggggcttcgggtccgcgccggcagggggcggaacgcgcggcc
atcaatgcgcccatgcagggcaccgcggccgacctgatcaagctggccatggtggccgtg
caagactggctggaagcggaaaagctgcaaacccgcatgatcatgcaggtacacgatgaa
ctggtgctggaagcgccggacgccgagatcgaggtggtcaaggaggccttgccgcgcctg
atgtgttcggtggccgagctgcgtgtgccgctggtggcggaagtgggcatggggaagaac
tgggagcaggcgcactaa
DBGET
integrated database retrieval system
