Achromobacter spanius: CVS48_29100
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Entry
CVS48_29100 CDS
T05274
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
asw
Achromobacter spanius
Pathway
asw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CVS48_29100 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asw03019
]
CVS48_29100 (pnp)
03016 Transfer RNA biogenesis [BR:
asw03016
]
CVS48_29100 (pnp)
Enzymes [BR:
asw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CVS48_29100 (pnp)
Messenger RNA biogenesis [BR:
asw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CVS48_29100 (pnp)
Transfer RNA biogenesis [BR:
asw03016
]
Prokaryotic type
tRNA degradation factors
CVS48_29100 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_SLS1_2
OB_RRP5_4th
DUF5813
Motif
Other DBs
NCBI-ProteinID:
AUA59711
LinkDB
All DBs
Position
complement(6417146..6419308)
Genome browser
AA seq
720 aa
AA seq
DB search
MFNKVTKSFQYGQHTVVLETGEIARQASGAVVVSIEDTVVLATVVASKKAKPGQTFFPLT
VDYIEKTYAAGRIPGGFFKREGKPSEKETLTSRLIDRPLRPLFPEDFYNEVQVVIHTLSV
NPEIDPDMAAMIGASAALAISGIPFNGPIGAARVGYIDGQYVLNPTASQLKSSKLDLVVA
GTENAVLMVESEAQQLSEEIMLGGVVYGHEQMQAVINTIHELVKDAGKPEWDWQAPAKDE
ALIAAVTAAAQEGLNAAYQIRDKQARTAKLREVSADVSAKLAAAAAEKGEALPDAVTVDN
IMFSLESAIVRGQILNGEPRIDGRDTRTVRPISVRLGVLPRAHGSALFTRGETQALVVAT
LGTKQDEQIIDALMGEYRDRFMMHYNMPPFATGETGRIGVPKRREIGHGRLAKRSLIPLL
PAPEDFQYTIRIVSEITESNGSSSMASVCGGSLAMMDAGVPVKDHVAGVAMGLILDGGKF
AVLTDILGDEDHLGDMDFKVAGTENGVTALQMDIKIQGITKEIMQVALAQAREGRLHILT
KMKEALDGSRGELSAFAPRMLTIKINPEKIRDVIGKGGATIRALTEETGTQIDISDDGTI
VIASVDEAQAKEAQRRIVELTADVEVGQMYEGSVLRLLDFGAIVQVLPGRDGLLHISEIA
NYRIANINDVLKVGQQVRVKVIEADDKGRLRLSIKAIGGIEAQQPAAAPDAAPQSEPQAE
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaaagtgacaaaatcgttccagtacggccagcacacggtcgtcctggaaact
ggcgagatcgctcgccaggcctccggcgccgttgtggtgtcgatcgaggacaccgttgtc
ctggccaccgttgtggcttccaagaaggccaagccgggtcagacgtttttcccgctgacc
gtcgactacatcgagaagacctacgccgccggccgtatcccgggtgggttcttcaagcgt
gaaggcaagccctccgaaaaggaaacgctgacctcgcgcctgatcgatcgtccgctgcgt
ccgctgttcccggaagacttctacaacgaagtccaggtcgtcatccacacgctgtcggtc
aatcccgagattgatcccgacatggccgccatgatcggcgcctcggccgcgctggccatt
tcgggcatcccgttcaacggcccgatcggcgccgcgcgcgtgggctacatcgacggtcaa
tacgtcctgaacccgaccgcctcgcaactgaagtcgtccaagctggacctggtggttgcc
ggtacggaaaacgccgtgctgatggtggaatcggaagcccaacagctttccgaagaaatc
atgctgggcggtgtggtttacggccacgagcagatgcaggccgtcatcaacaccattcac
gaattggtcaaggacgctggcaagcccgaatgggactggcaagctccggccaaggacgaa
gccctgatcgccgccgtgaccgcggctgcccaggaaggcctgaacgccgcctaccagatc
cgcgacaagcaggcccgcaccgccaagctgcgcgaagtgtcggccgacgtgtcggccaag
ctggctgccgccgccgctgaaaagggcgaggcgctgcctgatgccgtgaccgtcgacaac
atcatgttctcgctggaatcggccatcgttcgcggtcagatcctgaacggcgaaccgcgt
atcgacggtcgcgacacccgcaccgttcgccccatcagcgtgcgtctgggcgtgctgccc
cgcgcacacggcagcgcgctgttcacccgtggtgaaacgcaagcgctggtcgttgccacg
ctgggcaccaagcaagacgagcagatcattgacgcgctcatgggtgaataccgcgaccgc
ttcatgatgcactacaacatgcctccgttcgccaccggcgaaacgggccgcatcggtgtg
cccaagcgccgcgaaatcggccacggccgtctggccaagcgctcgctgatcccgctgctg
ccggcgccggaagacttccagtacacgatccgtatcgtgtcggaaatcaccgagtccaac
ggctcgtcgtcgatggcttcggtctgcggcggctcgctggccatgatggacgccggcgtg
ccggtcaaggatcacgtggccggtgtggccatgggcctgatcctggacggcggcaagttc
gccgtgctgaccgacattctgggtgacgaagatcacctgggcgacatggacttcaaggtc
gcgggcaccgaaaacggcgtcaccgcactgcagatggacatcaagatccagggcatcacc
aaggaaatcatgcaagtggcgctggcgcaagcccgcgaaggtcgcctgcacatcctgacc
aagatgaaggaagcgctggacggttcgcgtggcgagctctcggctttcgccccgcgcatg
ctgaccatcaagatcaaccccgagaagatccgcgacgtgatcggcaagggcggcgccacc
atccgcgcgctgaccgaagaaaccggcacgcagatcgacatctccgacgacggcacgatc
gtgatcgccagcgtcgacgaagcgcaggccaaagaagcccagcgccgcatcgtcgaactg
acggccgatgtcgaagtgggccagatgtacgaaggttcggtcctgcgtctgctggacttc
ggcgccatcgtgcaagtgctgccgggccgcgacggcctgctgcacatctcggaaatcgcc
aactaccgcatcgcgaacatcaacgatgtgctgaaggtcggccagcaagtccgcgtcaag
gtcatcgaggccgacgacaagggccgcctgcgcctgtccatcaaggcaatcggtggcatc
gaagcgcagcaacccgctgccgctcccgacgctgccccccaatcggaaccgcaagctgaa
taa
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