Adhaeribacter swui: HUW51_02470
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Entry
HUW51_02470 CDS
T06750
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
aswu
Adhaeribacter swui
Pathway
aswu02020
Two-component system
aswu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
aswu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HUW51_02470 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HUW51_02470 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aswu03021
]
HUW51_02470 (rpoN)
Transcription machinery [BR:
aswu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HUW51_02470 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
HTH_12
SF3b1
ENOX1
NES_C_h
LacI
Motif
Other DBs
NCBI-ProteinID:
QNF31643
UniProt:
A0A7G7G3A9
LinkDB
All DBs
Position
317143..318663
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AA seq
506 aa
AA seq
DB search
MQRLDLKQLLSQKLSPQQIQFIKLLQIPTAELEMRIKEEMEMNPALEEGPDDDKERSDDE
DSDNDDDFDADDSLDEDFDDGNADDTYDSVEDNIVDDGGDLDLDDYLHSDEIAGYKMQGD
GPGEDEDREMPLAGTSSLIDSLLDQLGFLNLNEEQEAIGMQLIGSIDNDGYIRRELSSIA
NDLAFSQNIEATEDEIEAVLRKIQTFDPAGIAARDLQECLLLQLERLDQDEFTETAERII
DECYDEFTKKHYEKIQSRLDIDDFELKQAINIILKLNPKPGGSDAGAGKPQYIIPDFILT
MENGQFNLTLNSRNAPDLRISREYADMFEAYDKSAKKDKKLKETVTFVKQKLDAAKWFID
AIKQRQQTLLRTMEAIVKRQREFFLEGDESKLRPMILKDIAEDIGMDISTISRVANSKSV
QTEFGVYPLKYFFSEGIATDSGEDASSREVKHILKEIIDKENKKKPLSDDKLEKMLNEKG
YNIARRTVAKYREQLNIPVARLRKEL
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagacttgatttaaaacaacttttatctcagaaactgtcgccgcagcagatccag
tttattaaactgttgcagattccgacggccgaactggaaatgcggataaaagaagagatg
gagatgaaccctgccctggaagaaggtccggacgatgacaaagaaagatctgacgatgag
gatagtgacaacgacgatgattttgacgccgatgatagcctcgatgaagattttgacgat
ggcaacgccgatgatacctacgacagtgtggaagataacattgttgacgatggcggcgat
ttagatttagacgattacctgcactccgacgaaattgccggttataaaatgcagggcgat
ggtcccggcgaagacgaagaccgggaaatgcctctggcgggcaccagttccttaattgat
tcgttgctggatcagttgggctttttaaacctgaacgaggaacaggaagccattggcatg
caactgattggcagcattgataacgacggctacatccggcgcgaactcagttctattgcc
aacgatttagctttttcgcaaaacattgaagctaccgaagatgaaatagaggccgtactt
cggaaaattcaaacgtttgacccggccggtattgctgcccgcgatttacaggaatgtttg
ttactgcaactagagcgcctcgaccaagacgaatttaccgaaactgccgaacggattatt
gatgagtgctacgatgaatttaccaagaagcactacgaaaaaattcagtcgcggctggat
attgatgattttgagctgaagcaagctattaatattattttaaaattaaaccccaaacca
ggcgggtcggatgccggtgcgggcaaaccgcagtacattattccggattttatcttgacg
atggaaaacgggcagtttaatttaaccttaaactcgcgcaacgccccggatttacgcatt
agccgggagtacgccgatatgtttgaggcctatgataagagcgccaagaaagataaaaag
ctaaaagaaacagtaacgtttgtaaagcaaaagctcgatgcggccaaatggtttatcgat
gccattaaacaacgccagcaaactttgctgcgcaccatggaagccattgtaaaacgccag
cgcgagtttttcctggaaggcgacgaaagcaagctgcgccccatgatcctgaaagacatt
gccgaagacatcggcatggatatttctactatttcgcgggtagccaacagcaaaagcgta
caaactgagttcggcgtctatccgctaaaatatttcttctccgaaggcattgccaccgac
tccggcgaagatgccagcagccgggaagtaaaacacattctcaaagaaattattgacaag
gaaaacaaaaagaaacctttatcggacgataagctggaaaaaatgctgaacgaaaaaggc
tacaacattgcccgccgcactgtagccaaataccgcgaacagctcaacattcccgtagcc
cgattgagaaaagagttataa
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