Adhaeribacter swui: HUW51_07955
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Entry
HUW51_07955 CDS
T06750
Symbol
rnr
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
aswu
Adhaeribacter swui
Pathway
aswu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aswu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HUW51_07955 (rnr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aswu03019
]
HUW51_07955 (rnr)
03016 Transfer RNA biogenesis [BR:
aswu03016
]
HUW51_07955 (rnr)
Enzymes [BR:
aswu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
HUW51_07955 (rnr)
Messenger RNA biogenesis [BR:
aswu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HUW51_07955 (rnr)
Transfer RNA biogenesis [BR:
aswu03016
]
Prokaryotic type
tRNA degradation factors
HUW51_07955 (rnr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
OB_RNB
S1
OB_Dis3
Motif
Other DBs
NCBI-ProteinID:
QNF32665
UniProt:
A0A7G7G681
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All DBs
Position
complement(1745694..1747991)
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AA seq
765 aa
AA seq
DB search
MRNKERTSSRGNSNRAANAGTPAKSRGKELAVTKSRLYKIFLNNPEQAFGYKQLSRRLGV
NDKAGRDLINEYLKQLRKEGKLKILEGSNYVLNTTASYITGIVDLANPKYAYIVSDETEE
DVRVFSEKLMFAMGGDRVKVRVYSSGSGDRQEGEVVEILERAKDEIVGKVELSKNFAFIV
PDFRKLYFDVFVGEDDLLDAKNGDKVLVKITEWPTSSNKSPIGKIIRTFGPAGENEAEIN
SIMAEFGLPFEFPENVEKEAEVIPVAIPEEEIAKRRDFRQVTTFTIDPLDAKDFDDALSI
QQLENGHWEIGVHIADVTHYIQEKTQLEREAYHRATSVYLVDRTIPMLPEKLSNGLCSLR
PHEEKLTFSAVFELDESGKLYDQWIGKTIIYSDRRFTYEEAQERIETGEGDFAQEILTLN
KIAHELKDKRFKNGAISFETVEVKFKLDEQGKPLSVYVKERKDAHKLIEEFMLLANRKVA
EFVFNMKKTKVRNTMVYRTHDAPDPDKLTNFSMFAKRFGYNLTVDNIDKISNELNKLAEQ
TEGKPEQNVLQNLAIRTMAKAKYTTEPLGHFGLGFEHYSHFTSPIRRYPDMMAHRLIYHY
LNGGKSENKEEYEEKCKYSSEMEKRAADAERASIKYKQVEFMQNTVGQQFKGIVSGVTEW
GLYVEVQENKCEGMVRLSDLEDDFYELDAQNYRIIGRRNKRIISFGDEVTVEVKGVNLND
RTIDLLLVTEQTEKKKPSRSKKTDTATTDDKTAGYNLKDYYGFDD
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaacaaagaaagaacatcatcccgtggcaacagcaatcgtgctgctaatgcaggt
actcctgctaaatcgcggggtaaagaattagccgtaacaaaatccagattatataaaatt
tttcttaataatccggaacaagcttttggctacaaacaactgtcgcgccggctgggcgtg
aacgacaaagcaggccgcgatttaatcaacgaatacttaaaacaactccggaaagaagga
aaattgaaaatactggaaggtagcaactatgttttaaacacgactgcttcctacattacc
ggtattgttgatttagcaaatcctaaatacgcctacattgtttcggatgaaaccgaagaa
gatgtgcgggtattcagcgagaaattaatgtttgccatgggcggcgaccgcgtgaaagtg
cgggtgtactcatcgggcagtggcgacaggcaagaaggcgaagtagtggaaatactcgaa
cgggctaaagacgaaattgtgggaaaagtagagctttcaaaaaactttgcttttatagta
cccgattttcgcaaactatactttgatgtgttcgtgggcgaagatgatttgctcgacgcg
aaaaacggcgacaaagttttagtgaaaattaccgaatggcctacttccagcaataaaagc
ccgattggtaaaattatacgcacctttggcccggccggcgaaaacgaagccgagattaat
tcgattatggctgagtttggtttgcctttcgagtttccggaaaatgtggaaaaagaagcc
gaagttattccggtagctattccggaagaagaaattgccaaacgccgcgatttccggcag
gttaccacctttaccatcgacccgctggatgccaaagattttgatgatgccttatctatt
caacaattagagaacgggcattgggaaattggcgtgcacattgcggacgtaacacactac
attcaggaaaaaacgcagctggagcgcgaagcgtaccatcgggctacatcggtttattta
gtagaccgtaccattcccatgttgcctgaaaaattatcaaatggtttatgctcattgcgg
cctcacgaagaaaaacttactttttcggcggtgtttgaactcgatgaatcaggtaaatta
tacgaccaatggattggtaaaaccattatttactccgaccggcggtttacctacgaagaa
gcgcaggaacgcattgaaaccggcgaaggcgactttgcgcaagagattttaactttaaac
aaaattgcgcacgagctaaaagacaaacggtttaaaaacggcgccattagtttcgaaacc
gtagaggttaagtttaaactggatgaacaaggaaaacccttatcggtttacgtgaaagaa
cgcaaagacgcgcataagctaatcgaagagtttatgttgctcgctaaccgcaaagtagcc
gagtttgtgtttaacatgaagaaaactaaagtccggaataccatggtgtaccgtacccac
gatgcccccgatccggataaactcactaatttttcgatgtttgccaaacgttttggatat
aacttaacggtggataacattgataaaatttcaaatgagttaaacaaactggccgagcaa
accgaagggaaaccagaacaaaacgtgttgcagaatctggcaattcgtaccatggcgaaa
gccaaatataccacggagccgctaggtcattttggtttaggttttgagcattattcgcat
tttacttcgcctatccgtcggtaccccgatatgatggcgcaccggttgatttatcattat
ttaaacggcggcaaatcagagaacaaagaagagtacgaagaaaaatgtaagtattcgtcg
gaaatggagaagcgggccgccgatgccgaacgggcctctattaagtataagcaagtagaa
tttatgcagaataccgtaggccagcagtttaaaggtattgtgtcgggtgttacggaatgg
ggcttgtacgtggaggttcaggaaaataaatgcgaaggcatggtgcggttaagtgatctg
gaagatgatttctatgaactggatgcgcaaaattaccggattattggccggcgcaataaa
cgcataatttctttcggcgacgaagttacagtagaagtaaaaggtgtaaatttgaacgac
cgaaccattgatttgcttttggtaaccgagcaaaccgaaaagaagaaacccagccgcagt
aagaaaacagataccgccactaccgacgataaaacggctggctacaatctgaaagattat
tatggctttgatgattaa
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