Alkalitalea saponilacus: CDL62_02305
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Entry
CDL62_02305 CDS
T04906
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
asx
Alkalitalea saponilacus
Pathway
asx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CDL62_02305 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asx03019
]
CDL62_02305 (pnp)
03016 Transfer RNA biogenesis [BR:
asx03016
]
CDL62_02305 (pnp)
Enzymes [BR:
asx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CDL62_02305 (pnp)
Messenger RNA biogenesis [BR:
asx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CDL62_02305 (pnp)
Transfer RNA biogenesis [BR:
asx03016
]
Prokaryotic type
tRNA degradation factors
CDL62_02305 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_RRP5
KH_KhpA-B
KH-I_KHDC4-BBP
S1_2
Motif
Other DBs
NCBI-ProteinID:
ASB48057
UniProt:
A0A1T5EQJ6
LinkDB
All DBs
Position
645057..647192
Genome browser
AA seq
711 aa
AA seq
DB search
MIKSIEKVIDLGDGRSIVIETGKLAKQADGSVIVRMGNTYLLATVVSAQEAKPGTDFMPL
SVEYREKFSAIGRFPGGFQKRESRPSDYEILVSRLVDRALRPLFPEDYHADTFVNVSLIS
ADKESTPDALAGLAASAALAVSDIPFNGPISEVRVARIDGQLVVNPTVSQMQKADLDIIV
GASYDNIMMVEGEMDEVSEAELLEAMKVAHDAIKVQCKAQMELVEMLGKKPTREYNHEEN
DEELREKVWKETYDKAYAVAKKANPNKLERLNDFSQVVKDFIEANYADVEESEIPMDLIK
KYYHDVEKEAVRRFMLDENVRIDGRKMDEIRPIWCEVDCLPGPHGASIFTRGETQSLTTV
TLGTKMDEKIVDDVLNRSIDRFLLHYNFPPFSTGEARPYRGVGRREIGHGNLAMRALKGM
IPADNPYVIRVMSDILESNGSSSMATVCAGTLALMDAGIKIKAPVSGIAMGLITDTKSDK
YVVLSDILGDEDHLGDMDFKVTGTQKGITATQMDIKVAGLSYEILEKALEQAKAGRLHIL
EKLIETMPETRADYKPHAPRIVSIKIPKEMIGAVIGPGGKIIQEIQASTGTILTITEEGM
FGQVDIAADNKEAIDKALDRINAIVAIPEMGKVYKGKVKSIVPFGAFVEILPGKDGLLHI
SEIDWKRIEKTEDVLKEGEEIEVKLIEIDSRSGKLKLSRKVLLPRENDKSK
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgattaagtcaattgaaaaagtgattgatcttggcgatggaagatcaatcgtgatagag
accggaaagttagccaaacaggctgacggctctgtcattgtacgcatgggtaacacatac
ctacttgcaactgtggtatctgcacaggaagcaaaacccggcactgattttatgccgttg
tctgttgaatacagagaaaaattttcagccatagggcgtttcccaggaggtttccaaaaa
agagaatctcgtccttcagactatgaaattcttgtctcaaggcttgtggacagagcatta
cgtcctttgttcccggaagattatcatgcagatactttcgtgaatgtctcattaatttcg
gctgataaagagagtactcccgatgctttggcaggactagcagcatcagctgctttagct
gtttcagacattcctttcaacgggccaatttctgaagtgcgtgttgcgcgcatagatgga
cagttggtagtcaatcccactgtttctcaaatgcagaaagctgatttggacatcatcgta
ggtgcttcttacgacaacataatgatggtagaaggcgaaatggacgaagtttcagaagca
gaactacttgaggctatgaaagtggctcacgacgctatcaaagtacagtgtaaagctcaa
atggaactggttgaaatgcttggcaaaaagccaacacgcgaatacaaccatgaggaaaac
gatgaagagctacgtgaaaaagtttggaaagagacctatgacaaagcctatgctgttgca
aaaaaggccaatccaaataaacttgaaagactaaacgatttcagccaggtagtgaaagac
ttcattgaggccaattatgccgatgtggaagagagcgaaatcccgatggatttgatcaaa
aagtactaccacgatgttgaaaaagaggctgtacgcagattcatgctcgatgaaaacgtt
cgtatagacggacgaaaaatggacgaaattcgccccatctggtgtgaagttgattgtttg
ccgggccctcatggagcatccattttcacaagaggtgaaactcagtctttaacaactgtt
acacttggaactaaaatggatgaaaaaatcgtggacgatgttcttaacagaagcatcgac
agatttttgctccactacaacttccctcctttctcaaccggagaagccagaccataccgc
ggcgttggccgacgcgaaattggtcacggaaacctcgccatgagagctcttaaaggaatg
attcctgctgataatccgtatgttatcagagttatgtctgacatacttgaatcaaacggt
tcttcatcaatggcaactgtgtgtgcaggaacacttgcattaatggatgcagggatcaaa
attaaagcccccgtttccggcattgccatgggacttatcaccgacacaaaatcagataaa
tatgtagtattgtctgacattcttggcgacgaggatcacttgggtgatatggactttaaa
gttaccggtacacaaaaagggatcaccgccacgcaaatggacataaaagtggcagggctt
tcgtatgaaatccttgaaaaagctcttgagcaggcaaaagctggtcgtttgcatattctt
gaaaaacttattgagaccatgcctgaaacacgtgccgactacaagcctcatgctccaaga
atcgtttcaattaagattccaaaagagatgattggtgcagtaattggccccggaggtaaa
atcattcaggaaatccaagcttctaccggaaccattttgaccattaccgaagaaggaatg
tttggacaggtggacattgcggctgataacaaagaagccattgacaaagcgcttgacaga
atcaacgccattgtagccatacctgaaatgggcaaggtttacaaaggaaaagtgaagtca
atcgtgcctttcggagcttttgttgaaattcttcctggcaaagacggattacttcacatt
tcagaaatcgactggaaacgcatcgaaaaaacagaagatgtgttaaaagaaggcgaagaa
attgaagtaaaattaatcgaaattgattccagatcagggaaactaaaactttcaagaaaa
gttcttcttcccagggaaaatgataaatcgaaatag
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