Alkalitalea saponilacus: CDL62_03810
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Entry
CDL62_03810 CDS
T04906
Name
(GenBank) RNA polymerase subunit sigma
KO
K03086
RNA polymerase primary sigma factor
Organism
asx
Alkalitalea saponilacus
Pathway
asx02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
asx00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CDL62_03810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asx03021
]
CDL62_03810
Transcription machinery [BR:
asx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CDL62_03810
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
ASB48331
UniProt:
A0A1T5HS85
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All DBs
Position
1005057..1005923
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AA seq
288 aa
AA seq
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MRQLKITKQVTNREAPSLDKYLHEIGKVQLISAEEEVTLAKKIKQGDQLALERLINANLR
FVVSVAKQYQNQGLSLPDLINEGNLGLIKAAQRFDETRGFKFISYAVWWIRQSILQALAE
QARIVRLPLNKIGSINKVNNTFSRLEQEFQREPTSYEIADILDMAPKEVKEALKVSSRHV
SMDAPLKSDEENTLYDVLLSTEASSPDSHLLDDSLRREIERSLSTLSPREADIVKLYYGL
NGEPPYSLEEIGKLFNLTRERVRQIKEKAIKRLKHTYRSKILRSYLGE
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagacaactcaagataacaaaacaagtaactaacagagaagctccttcattagacaaa
tatctccatgaaattggtaaagtgcaactaatttcagcagaagaagaagtaaccctggca
aaaaaaataaaacaaggagatcagttggctcttgagagactgattaacgctaacctgcgt
ttcgtagtttctgtggcaaaacagtaccaaaatcagggtttaagtcttccggatctaatt
aatgaaggtaaccttgggctgataaaagcagcacaaagatttgatgagacaagaggtttt
aaattcatttcctacgccgtatggtggatcaggcaatccattttacaagctttggcggag
caagcccgaattgttagactgcctcttaataaaattggaagcatcaataaggtaaacaat
accttttcaagattggagcaagagtttcagagagaaccaacttcctatgaaattgccgat
attctggacatggctcccaaggaggtaaaagaagcactgaaggtatcatcccgacatgta
tctatggatgcgcctcttaaatctgatgaggaaaatacgctttacgatgtattattatct
accgaggcttcaagtccagattcccatttacttgacgattcccttcgaagagaaattgag
cgttcactttccaccctttctccaagagaggcagatattgtaaagctttattatggacta
aacggtgagcctccgtactcacttgaagagattggcaaactttttaatctaacacgtgaa
cgtgttagacagataaaggaaaaggccattaaacgcttaaaacatacctacagaagtaaa
atcctcagatcgtatctgggagaataa
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