Alkalitalea saponilacus: CDL62_03920
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Entry
CDL62_03920 CDS
T04906
Name
(GenBank) endonuclease MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
asx
Alkalitalea saponilacus
Pathway
asx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
asx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CDL62_03920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asx03400
]
CDL62_03920
DNA repair and recombination proteins [BR:
asx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CDL62_03920
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
DHC_N1
HupF_HypC
TetR_C_43
Motif
Other DBs
NCBI-ProteinID:
ASB48351
UniProt:
A0A1T5HSB4
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Position
complement(1033604..1036108)
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AA seq
834 aa
AA seq
DB search
MIYPDTFEEKLSFGKIRELLEEHCLSTLGKEWVDRMTFSENFTQVQTWLGQAAEMLRIEQ
EDAEMPASWFIDLRAPLKRIRVEGLFLEESELFDLRRSLGTIRDLIRFIKSREAEEYPHL
NSLVANVMIYPAVIDRIDSVLNRQGKIKDNASPELARLRREIINQQQNATRRMASILRAA
QKDGLVEQDISISIRDGRAVIPVPSANKRKLAGIVHDESATGKTTYIEPAAIVEINNEIR
ELTYAERREVTKILTEVSDFIRPYIEDLLFAYNFLGIIDFIRAKARFALRVEAIVPQVKE
ERAFHWIEARHPLLYLLLKAQNKPIVPLSIQFTPDERIVLISGPNAGGKSVCLQTVGLVQ
YMLQCGLPVPVMEGTSMGFFKNIFLDLGDEQSIENDLSTYSSHLLNMKNFVRNSNEHTLM
LIDEFGTGTEPMLGGAIAEAVLEQLNQQGAYGVITTHYTNLKHYASQTDGIVNGAMQFDT
HQLQPLFKLEVGSPGSSFAFEIARKIGLPESILEAAKNRLGEDHINFDKHLREIIRDKRY
WEQKRRSIRERERKLESVSQKYEIELEQLTRERKDIIEKAKQEAAGLLAGTNKEIEKTIR
TIREAQAEKEKTRKARVELDLFKESAIAGAGDNEELQKQLQAKMNKIRQRKERKKSQNQY
SNTGELENQPAIPPQPVIDEIVEGDVVKLEGQPIPGEVMEVKGRDALVAFGQLITKVKIS
RLEKISKGDYKKAMRTESKVAAGLAERIRDKKLNFKPDIDVRGMRADEAIDRISVHLDEA
VMCGVNQVKVLHGKGTGALRLMIREYLGTVPFVKNFRDEHVQFGGSGITLIELE
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
gtgatatatcctgatacttttgaggagaagttgagttttggaaagatacgtgaactttta
gaagagcattgtctgagcactttaggcaaagaatgggttgatagaatgaccttttctgag
aactttacacaggtgcaaacgtggctgggacaggcagctgaaatgttgcgtattgagcaa
gaggacgcagagatgccggcatcgtggtttattgatttgcgggctcctctaaaacgcatc
cgggttgaaggattgtttttggaagagtcagaattgtttgatttacggcgttcacttgga
accatacgtgacctcatacgttttataaaatcccgcgaagctgaagaatatcctcacttg
aattcgctggttgccaatgtgatgatttatccggccgtcatcgatcggatagattccgtt
ttaaatcgacagggaaaaattaaggacaacgcgtctcctgaacttgcccgtttgagaagg
gaaatcatcaatcagcagcaaaatgctacccgtcgaatggcttcaattctgcgggctgcc
cagaaggatggattggttgagcaggacatcagcatcagcattcgggatggaagagctgtt
attcctgttccatcggccaataaacgcaaactcgccggcattgtacatgatgaatcggca
acggggaaaacaacctacattgagcctgcggccattgttgaaatcaacaatgaaataagg
gaattaacatatgcagaaagacgcgaagttacaaagatcttaaccgaagtgtcggatttt
atccgaccatatattgaagatcttctttttgcgtacaattttctgggaatcattgatttt
attagagcaaaggctcggttcgctttaagagttgaggccatcgttccacaggttaaagaa
gaaagggcttttcactggattgaggctcgtcatcccttattgtacttgttgctgaaagcc
caaaacaaacccatcgtaccattatccatccagtttacccccgacgagcgcattgtgctt
atttcagggcctaatgccggaggaaaatcggtttgtttgcaaacagtcggtctagtacag
tacatgttacaatgtgggttaccggttcctgttatggaaggaacctctatgggttttttt
aaaaatatttttcttgatttgggagatgagcaatcaattgagaacgatctcagtacttac
agttctcatctgttgaatatgaagaactttgtgcgtaacagcaatgagcatacgctcatg
ctcattgacgaatttggaaccggtaccgagcccatgctgggaggagccattgctgaagct
gttcttgagcagctcaatcagcagggtgcctatggtgtaattactacgcactacaccaat
ctgaaacattatgcatcccaaaccgatggcatcgtgaatggagccatgcaatttgataca
catcagctacagccactgttcaaattggaagttggttcaccggggagttcctttgctttt
gaaatagccaggaaaataggtttgcctgaatccatccttgaagcggccaaaaacaggctg
ggagaggatcatataaacttcgataaacatttgagggagatcatcagggataagcgatac
tgggaacagaaacgcagaagcataagggagagagagagaaaacttgagagtgtgtctcag
aagtatgaaatcgagctggagcaattaacccgtgagcgaaaagatatcattgaaaaggca
aaacaagaagctgccggattgcttgcaggtactaataaagagatagagaaaaccatcaga
accatccgcgaagcacaggccgaaaaagaaaaaacccggaaagcacgtgtagaattagac
ctttttaaggaatctgctattgccggagctggtgataatgaagagttacaaaagcagttg
caggccaaaatgaataaaatccggcaacgcaaggagaggaaaaagagccagaatcaatat
agtaataccggggaattggaaaatcagcctgcaataccaccgcaacctgtcatcgatgag
attgttgaaggtgatgtggttaagctggaaggacagccaattccgggagaagtgatggag
gtaaagggacgtgatgcgctggtagcttttggtcagctcataaccaaggtgaaaattagt
cgtctggaaaaaataagcaaaggagattacaaaaaggccatgcgcactgaaagtaaagtg
gctgctggtctggccgagagaatcagggataaaaaacttaattttaaacctgatatagat
gtgcgtggaatgcgtgctgatgaggcaattgatcgaatttcggtgcatcttgacgaagct
gtaatgtgtggggtaaatcaagttaaggttcttcatggaaaaggtaccggcgcgctgcgt
ctaatgattcgtgaatatctcggaaccgttccatttgtgaaaaacttcagggacgaacac
gttcaatttggaggttcagggattactctgatcgaattggagtga
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