Alkalitalea saponilacus: CDL62_12380
Help
Entry
CDL62_12380 CDS
T04906
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
asx
Alkalitalea saponilacus
Pathway
asx02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
asx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CDL62_12380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asx03021
]
CDL62_12380
Transcription machinery [BR:
asx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CDL62_12380
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_23
GerE
HTH_24
HTH_28
HTH_16
HTH_38
HTH_Mga
PF0610-like_N
HTH_40
HTH_VMAP-M9
HTH_AsnC-type
DUF7123
DUF6362
DUF2774
TnsD
HTH_11
HTH_7
Motif
Other DBs
NCBI-ProteinID:
ASB49875
UniProt:
A0A1T5CI89
LinkDB
All DBs
Position
3216807..3217361
Genome browser
AA seq
184 aa
AA seq
DB search
MQQPPYPEKKLFAQIANGDEKAFEKLFRLFYPMLVNYAVKYLNDREIAENVVQEMFVSIW
EKREALKVDNPRAYLMRAVTNRCFNELKSKKLFYDVDDFQIPEVDQDIPDESLIAEVQSV
ISMLPEQRQKIFRMSRFEGMKYKEIAERLGLSVKTVEAQMGKALQFLREQLPIKIKESGK
GFSN
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaacctccatatcctgaaaaaaaactattcgcgcaaatagccaatggagatgaa
aaagctttcgaaaagctttttcggttgttttaccctatgctggtgaattacgctgtgaaa
tatttgaatgatcgggagattgctgaaaacgttgttcaggaaatgtttgtcagcatttgg
gaaaaaagggaggctttaaaggtggataatccccgggcatacctcatgcgagctgtcaca
aatcggtgttttaatgagttgaaatccaaaaaattgttttatgatgtggatgattttcag
attcccgaggttgatcaggatattccggatgaatcactgattgcagaagtgcaatcagta
atatcaatgctgccggaacagaggcaaaagatctttcgcatgagtcgcttcgaaggaatg
aaatataaggagatcgcagagagattaggtctttctgttaaaactgttgaagctcagatg
ggaaaagctcttcaattcctgagagaacaattgccgataaaaattaaagagagtggtaag
ggtttttccaattaa
DBGET
integrated database retrieval system