Alkalitalea saponilacus: CDL62_14170
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Entry
CDL62_14170 CDS
T04906
Name
(GenBank) RNA polymerase subunit sigma
KO
K03086
RNA polymerase primary sigma factor
Organism
asx
Alkalitalea saponilacus
Pathway
asx02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
asx00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CDL62_14170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asx03021
]
CDL62_14170
Transcription machinery [BR:
asx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CDL62_14170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
HTH_28
dCache_3
Motif
Other DBs
NCBI-ProteinID:
ASB50202
UniProt:
A0A1T5HTD6
LinkDB
All DBs
Position
complement(3737313..3738173)
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AA seq
286 aa
AA seq
DB search
MRQLKITKSITNRESASLDKYLQEIGREELISVEEEVELAQRIKKGDQTALEKLTRANLR
FVVSVAKQYQNQGLSLPDLINEGNLGLIKAAEKFDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNQVGSLNKINKAYSKFEQEHERKPSPEELADQLELPADKVADTLRVAGRHI
SVDAPFVEGEDNSLLDVLVNSDSPNADRTLMNESLSKEIERALATLTERESDIIKLFFGI
GCQEMTLEEIGERFGLTRERVRQIKEKAIRRLRHTSRSKLLKSYLG
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgagacaactaaaaataacaaaatcaatcaccaatcgcgaaagcgcatctctggacaaa
tatcttcaggagattgggcgcgaggaacttatctctgtagaagaagaggtagagctggcg
caacgcataaaaaaaggcgaccaaactgctcttgaaaaactaaccagggcaaacttgcga
tttgtggtatcagttgctaaacaatatcaaaaccaaggacttagtcttccagaccttatt
aatgaaggaaacctcggattgattaaagcggcagagaagtttgatgagaccagaggtttc
aaatttatttcatacgccgtatggtggatcagacaatccattctacaagcgttagcagaa
caatcgagaattgtcagactaccgttaaatcaggttggatcgttgaataaaatcaacaaa
gcttactcaaaatttgagcaggagcatgagcgcaagccttctcccgaagagttggcagat
caacttgaactaccagcagacaaagtggcagatactctgcgggtagcaggacggcatatt
tccgttgatgcaccgttcgtggaaggagaagacaacagcctgctggatgtattggtgaac
agtgattctccaaatgcagacagaactctgatgaatgaatctctttcaaaagagattgaa
agagcgctggctactcttaccgaaagagaaagcgacatcattaaactattctttggaata
ggatgccaggaaatgacgcttgaagagattggtgaaagatttggacttaccagagaaaga
gtaagacagattaaagaaaaagcaatacgaagattaagacacacttcacgaagcaagttg
ttgaaatcttatcttggataa
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