Alkalitalea saponilacus: CDL62_16255
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Entry
CDL62_16255 CDS
T04906
Name
(GenBank) RNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
asx
Alkalitalea saponilacus
Brite
KEGG Orthology (KO) [BR:
asx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
asx03016
]
CDL62_16255
Enzymes [BR:
asx01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
CDL62_16255
Transfer RNA biogenesis [BR:
asx03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
CDL62_16255
Prokaryotic type
tRNA splicing ligases
CDL62_16255
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Motif
Pfam:
RtcB
Thioredoxin_8
Semialdhyde_dh
Motif
Other DBs
NCBI-ProteinID:
ASB50586
UniProt:
A0A1T5D614
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Position
complement(4260475..4261638)
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AA seq
387 aa
AA seq
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MEKVISTEKHPIKLWLKEIDEDALEQARHLANLDFTFRHVALMPDAHTGFGMPIGGVLAT
RNHVIPNAVGVDIGCGMCAVPTELREISPPQLKEVLSGIRKRIPVGMKSHKKMQDMHHMP
KWKNLPNIVEQEFEKARTQVGTLGGGNHFIEIQKGSDGFIWIMIHSGSRNLGKTVADYYN
KLARKLNEKWQSSVPKQWDLAFLSLDSEEAKDYISEMNYCIDFALANRKLMMHFVQEAIN
EAIGKEISFGGIINIAHNYASFETHFDEKVLVHRKGATRAFPGETGIIPGSQGTSSYIVE
GVGNPESFMSCSHGAGRRLGRRQAQRQLDFTTEVQKLNDKGIIHSIRTQRDLDEAAGAYK
DIDEVMMNQSDLVKIKLKLEPLAVVKG
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaggtgatttccactgaaaaacaccccatcaaactgtggcttaaagagattgat
gaagatgccttagagcaggcccggcatttggccaatctggactttacctttcgtcatgtt
gctttaatgcccgatgcccatacaggatttggaatgcccatcgggggtgttttagccaca
agaaatcatgtcatccctaatgcggtgggtgtagatattggatgtggaatgtgtgcagtt
ccaacagagttaagagaaatttcacctcctcaactaaaggaggttctgtcgggtattcgt
aaacgaatacccgttggcatgaaaagccataaaaagatgcaggatatgcatcatatgcct
aaatggaaaaatctcccaaatattgtagaacaagaatttgaaaaagccagaactcaggta
ggaactctgggtggcggtaatcacttcatagaaattcaaaaaggcagcgatggttttata
tggattatgattcactcaggaagtcgaaatctgggtaaaaccgtggccgattactacaat
aagctggccagaaaactgaacgagaaatggcaatcatcagttcctaagcagtgggatctg
gcttttttatcgctcgattcggaggaagcaaaggactacatctcagagatgaattactgc
atcgattttgcattggccaaccgaaaactaatgatgcattttgttcaggaagccatcaat
gaggccattggtaaagagatatctttcggaggcatcattaatatcgcacacaactatgcc
tcttttgagactcattttgacgagaaggttttggtacaccgaaaaggagctacaagagct
tttcccggtgaaacgggtatcataccaggttcacagggaacctcatcctacattgtagaa
ggtgttggaaatcctgaaagttttatgtcgtgttcccacggtgcaggtcgtcgtcttgga
aggcgacaggcacaacggcaacttgattttactacagaagttcaaaaacttaacgataaa
ggaattattcattccatacgaacacaaagggatctggacgaagcagccggagcatacaaa
gacattgatgaagtgatgatgaaccaatccgacctggttaaaattaagcttaaactagaa
ccgctggcagtggtgaagggttga
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