Candidatus Arsenophonus lipoptenae: AUT07_00166
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Entry
AUT07_00166 CDS
T04248
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
asy
Candidatus Arsenophonus lipoptenae
Pathway
asy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
asy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AUT07_00166 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asy03021
]
AUT07_00166 (rpoA)
03400 DNA repair and recombination proteins [BR:
asy03400
]
AUT07_00166 (rpoA)
Enzymes [BR:
asy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AUT07_00166 (rpoA)
Transcription machinery [BR:
asy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AUT07_00166 (rpoA)
DNA repair and recombination proteins [BR:
asy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AUT07_00166 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AMA64753
UniProt:
A0A120HPT7
LinkDB
All DBs
Position
complement(202812..203801)
Genome browser
AA seq
329 aa
AA seq
DB search
MHDSVTNFLKPRLVDIEHIDLIYAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVKVHGKDEVILHLNKAGIGPVTAADISPNDD
IEIVRPEYIICNLTDDSASINMHIKVQRGRGYVPASARIHSEDDERPIGRLLVDACYSPI
ERIVYNVEATRVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILVEQLEAFVDLRDVAKV
EVKDEKPEFDPILLRTVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLAIKGLSLGMRLENWPPVSVDDK
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcatgattctgtaacaaattttttaaaaccacgtttagttgatattgagcatattgat
ttaatttatgccaaggtaacgcttgagccattagaacgtggttttggacatactcttggt
aatgcactacgtcgtattttgctctcatctatgccaggatgtgctgtaactgaggttgaa
attgacggtgtactacatgaatatagtactaaagagggagtacaagaagatatattagaa
attcttcttaatttaaaaggattagcggtaaaagtgcatggtaaggatgaagttatcttg
catttaaataaagctggaattggccctgttactgctgctgatattagtcctaatgatgat
attgaaattgttagaccagaatacattatatgtaatttaactgatgatagtgcttctatt
aatatgcatattaaagttcaacgcggacgtggatatgtgcctgcttctgctcgtattcat
tctgaagatgatgaacgaccaattggtcgcctattagttgatgcatgctatagtcctata
gaacgtattgtctataatgtagaagcaactcgtgtagagcaacgtactgatttagataaa
ttagttattgaaatggagactaatggcacaatagatccagaagaagcaattcgtagagct
gccactatattagttgaacaactagaagcttttgttgatttacgtgatgttgcaaaggtt
gaagttaaggatgaaaagccagaatttgatcccattttgcttcgtacggtagatgattta
gaattgactgttcgatctgctaattgtttaaaagcagaagctattcattatattggtgat
ttagtccagcgtactgaagttgaattactaaaaactcctaatttaggtaaaaagtcactg
actgaaattaaggatgttttagctataaaaggattatcacttggtatgcgtctagaaaat
tggccaccggtaagtgttgatgacaaataa
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