Entry |
|
Symbol |
gyrB
|
Name |
(GenBank) DNA gyrase subunit B
|
KO |
|
Organism |
asy Candidatus Arsenophonus lipoptenae
|
Brite |
KEGG Orthology (KO) [BR:asy00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:asy03032]
AUT07_00352 (gyrB)
03400 DNA repair and recombination proteins [BR:asy03400]
AUT07_00352 (gyrB)
Enzymes [BR:asy01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AUT07_00352 (gyrB)
DNA replication proteins [BR:asy03032]
Prokaryotic type
DNA Topoisomerases
AUT07_00352 (gyrB)
DNA repair and recombination proteins [BR:asy03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AUT07_00352 (gyrB)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
431994..434408
|
AA seq |
804 aa
MSYIYNSSSIKILKGLDAVRKRPGMYIGDTEDGTGLHHMVFEVVDNSIDEALAGYCTKIV
VTIHTDNSISVIDNGRGIPTDLHEEEGISAAEVIMTVLHAGAKFDDNSYKVSGGLHGVGI
SVVNALSEKLYLIIKRDGKIHEQTYLLGIPQSSLKTIGHTNEFGTYIRFWPSLKIFKTIT
EFEYSILKKRLQELSFLNSGISISLIDKRDNKTNHFHYHGGIKAFVEYLNRNKNPIHSNI
FYFSSERNGVNVEISMQWNDSFQENVYCFTNNIPQKDGGTHLIGFRTAMTRTLNHYMDKE
GYQKKTKIIATGEDTREGLIAVISIKVPDPKFSSQTKDKLISSEVKNIVETLMNEKLIDY
LLENPNDAKIVVNKVIDAARARETARKIREMTRRKGILDLAGLPGKLADCQDRDPSTSEL
YLVEGDSAGGSAKQARNRKNQAILPLKGKILNVEKARFDKMLSSQEIAALITALGCGIGI
DEYNPNKLRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPEIIKGGHLYIAQPPLYKIRNG
KKEIYIKDDECMREYLISIALENTTLYTSHQDLGLKGKPLEQLIAEYNSAQKIIKHLERI
YPLSLLNHLIYQPTLIIDDLKDQKKVENWINILVKRLTDHEKYGGSYNYYINKNNEHQVF
EPVLCIKTHEIKTYYNLDFDFFHGVEYTQITKISRLIKNLIKEGAYVERGEIRKSVTSFE
DVLNWLSKESRRGLIIQRYKGLGEMNSEQLWETTMDPNKRNMMQVTIKDAIQTDQLFTTL
MGDAVEPRRIFIEKNALKAENIDI |
NT seq |
2415 nt +upstreamnt +downstreamnt
atgtcatatatatataattcttcaagtattaagatattaaaaggtcttgatgccgtacgt
aaacgtccagggatgtatatcggagacactgaagatggcacaggactacatcatatggtt
ttcgaagtagttgataattctattgatgaagctttagcaggttattgtacaaaaattgtt
gtaacaatacatactgataattcaatatctgtaatcgacaatgggcgtggtattcctaca
gatctacatgaagaagaaggaatttctgctgcagaagtaataatgacagttctgcatgct
ggagctaaattcgacgataattcctataaagtttctggtggcttacatggcgtcggtatt
tctgttgttaatgctttatcagaaaaattatatttaattataaaacgtgatggaaagata
cacgaacaaacttatctattaggtattccacaatcatcgctaaaaactataggacataca
aatgaatttgggacatatattcgtttttggccaagtctaaaaatatttaaaactatcact
gaatttgaatatagtattttaaaaaaaagattacaggaactatctttccttaattcaggt
atatcaatcagtttaattgataaaagagataataaaacaaatcattttcattatcatggt
ggtattaaagcttttgtagagtatttaaatagaaataaaaatcctattcattctaatatt
ttttatttttcttcagaaagaaacggagtaaatgtagaaatatctatgcaatggaatgat
agctttcaagaaaacgtatattgttttacaaataatataccgcaaaaagatggagggaca
catcttataggttttcgaacagcaatgacacgtacgttaaatcattatatggacaaagaa
ggatatcaaaaaaaaacaaaaattattgctactggtgaagatacacgtgaaggattaatt
gctgtaatttcaattaaagttccagatccaaaattttcttcacaaacaaaagataaacta
atttcttcagaagtaaaaaatattgtagaaacattaatgaatgaaaaattgatagattat
ttattagaaaatcctaatgatgccaaaatagttgtgaataaagttatagatgctgcacgt
gcacgtgaaactgctcgtaaaatacgtgaaatgactcgtcgcaaaggaatactagactta
gctggattaccaggaaaactagctgattgtcaagatcgtgatcctagtacatcagaacta
tatttagtagaaggtgattctgctggtggatctgcaaaacaggctcgtaatcgaaaaaat
caagctattttaccattaaaaggtaaaatacttaatgtagaaaaagctcgttttgataag
atgttatcttctcaagaaattgctgctttaataacagctttaggatgtggtattgggata
gatgaatataatccaaataaattacgttaccataacattattatcatgactgatgcagat
gttgatggttctcatattagaacattattgttaactttcttttatcgtcagatgccggaa
attattaaaggaggacatctgtacattgcccagccacctttatacaaaataagaaatggt
aaaaaggaaatatatataaaagatgatgaatgtatgcgtgaatatttaatatcaatagca
ttagaaaatactacactttacactagtcatcaagatttaggattaaaaggcaaaccatta
gaacagctaatagctgaatataattcagcacaaaaaattataaaacatttagaacgtatc
tatccactttctttattaaatcatcttatttatcaacctactttaataatagatgattta
aaagatcaaaagaaagtagaaaattggattaacatcttagttaaacgtctaacagatcat
gaaaaatatggtggtagttataactactatattaataaaaataatgaacatcaagtgttt
gaacctgttttatgtattaaaactcatgaaattaaaacttattataatttagattttgat
ttttttcatggtgtagaatatactcaaatcacaaaaataagtagattaataaaaaacctt
attaaagaaggtgcttatgttgaaagaggtgaaattagaaaatctgtcacttcgtttgaa
gatgtattaaactggttatcaaaagagtctcgtcgaggactaataattcaacgttataaa
ggattaggagaaatgaattcggaacaattatgggaaacaacgatggacccaaataaaaga
aatatgatgcaagtcactattaaagacgctattcaaactgaccaactatttactacttta
atgggtgatgctgttgaaccacgtagaatttttattgaaaaaaatgcattaaaagcagaa
aatatagatatttaa |