Candidatus Arsenophonus lipoptenae: AUT07_00648
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Entry
AUT07_00648 CDS
T04248
Symbol
rho
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
asy
Candidatus Arsenophonus lipoptenae
Pathway
asy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AUT07_00648 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asy03021
]
AUT07_00648 (rho)
03019 Messenger RNA biogenesis [BR:
asy03019
]
AUT07_00648 (rho)
Transcription machinery [BR:
asy03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AUT07_00648 (rho)
Messenger RNA biogenesis [BR:
asy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AUT07_00648 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_22
OB_RNB
AAA_25
S1CSD-TOTE-2
AAA
Motif
Other DBs
NCBI-ProteinID:
AMA65196
UniProt:
A0A0X9VN91
LinkDB
All DBs
Position
complement(803794..805053)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTKFKNTLVSELIILGESMGLENLARMRKQDIIFSILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
FDKPENARNKILFENLTPLHANNRLRMERGNGSTEDLTARVLDLSAPIGRGQRGLIVAPP
KAGKTMLLQNIAANVTNNYPDCVLMVLLIDERPEEVTEMQRLVKGEVIASTFDEPASRHV
QVSEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPSSGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTLPDELQKMWILRKIIHPMGDIDAMEFLINKLAMTKRNDEFFEFMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccaaatttaaaaatacgctagtatctgagttaataattcttggcgaaagt
atggggttagaaaacttagcacgaatgagaaaacaagatattatcttttcaattttaaaa
caacatgcgaaaagtggagaagatatttttggagatggcgtgctagaaattttgcaggat
ggatttggatttttacgttctgctgatagctcttatctagcaggtcctgatgatatttat
gtttctcctagtcaaattaggaggtttaatttacgtactggagatactatatcaggaaaa
attcgcccccctaaagaaggagaacgatactttgcactattaaaggtaaatgaagtgaat
tttgataaacctgaaaatgcacgcaataaaatattatttgaaaatctaaccccactacat
gctaataatcgtttacgtatggagaggggtaatggatctactgaagatttaacagctagg
gtcttagatttatcagcacctattggacgaggacaaagaggtttaattgtagcaccacca
aaagcaggtaaaacaatgttattgcaaaatattgcagctaatgttacgaataattaccca
gattgcgtattaatggtattattaattgatgaacgtccagaagaagtaacagaaatgcag
cgcttagttaaaggggaagttattgcatcaacatttgatgaacctgcatctcgtcatgtc
caagtgtctgaaatggtaatagaaaaagcaaaaagattagtggaacataaaaaagatgta
ataatcttattggattctattacacgtcttgcacgtgcgtacaatacagtagttccttct
tctggaaaagtattaactggtggagtagatgcaaatgcattgcatcgcccaaaacggttt
tttggtgctgcacgtaatgtagaagaaggtggtagccttacaataattgctacggcatta
gttgatacaggttcaaaaatggatgaagttatatacgaagaatttaaaggtactggtaat
atggaattacatttatcacgtaaaatagctgaaaaacgtgttttccctgcaattgattat
aaccgttcaggtactcgtaaagaagaattattaacattgccagatgaattacaaaaaatg
tggatattacgtaaaattattcatcctatgggggatattgatgcaatggaatttttaatt
aataaattagctatgactaaaagaaatgatgaattttttgaatttatgaaaaggtcttaa
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