Apodemus sylvaticus (European woodmouse): 127663574
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Entry
127663574 CDS
T10613
Symbol
Sh3tc2
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asyl04131
]
127663574 (Sh3tc2)
Membrane trafficking [BR:
asyl04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
127663574 (Sh3tc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_2
TPR_12
SH3_1
SH3_9
TPR_8
TPR_2
TPR_1
TPR_MalT
SNAP
Motif
Other DBs
NCBI-GeneID:
127663574
NCBI-ProteinID:
XP_052011182
LinkDB
All DBs
Position
13:complement(35543569..35607292)
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AA seq
1323 aa
AA seq
DB search
MVHTWVAASVSLGSGVYPGAQFGVSHSGCKKGSEVCGASTFPQEAGCKEGPSKDPPGLTE
GTRSLENKGKCFLLQNMTQELVLSFSVKSRSRRCVNAALQEAARRRLWALENEAHEVHAL
FKDLSARLVSVQSQKDQFLITFKTLEEIWKFSTYLNLGYVSACLEHLFFDHTYWLNNRLV
DDTEIQVSVDDNHLENIYLGLLLQEGHFFCRAMCSVAQPADKEGDYLTLCRNELISVLSG
DGSEWEGVSLVTGQRGLVPVSALEPLPIPFHQWFLKNNPGICGPSRKRGWTGSGQIGRGR
CKALMDYEQEERDELCFLQGESIEVIGFVIPGLQWFIGKSMSSGEVGFVPTRSIDLDSCS
PVSKNSVFFSDEERCSLWSPGSDRKAECSGFLCALAHTDITSIYRLSEFESIQNLQNDLN
ASQPEGFREARSGGTWMERQTMGSRRSSSSIDSSLEEELISASSDSYHLPEPDDLDDPEL
FMDLSTSLDEDEMEHFAPILAFLDHEGYTDHFKSLYDFSFSFLTSSFYSFPEEDELVAYL
ETSRKWAKMSHMTWAHARLCFLLGRLSIRKTKLSQARVYFEEAIRVLDGAFEDLSLVAAL
YINLAAIYLRQRLRHKGPTLLEKAGALLACLPDHEFSAKNELDVVAYVLRQGIVVGSSPL
EARSCFLAIRLLLSLGRHEEVLPFAERLQLLSGNSSASEATATMLSSLYDKKYLPHLAVA
SVQKRGSQSARGMSVSIWQAYLVLQNATKILGVPSSRWCEVSALACPTLRQALAACEEQT
DLNIQRTLCLILSKMYLQHRSPDGSVHYLSQAHMLGKLLGEEEAFESSLCLAWAYLLARQ
AKKALEILEPLLCSLRETECVTQRGVVHNLLGLAFQDEGRTSRAAKSYLRALIRAREMGN
IRNQAVSMANLGHLTLKSCMQQSARGYLLQAVRLYSELQASKETDMELVQVLLWLGQALV
SGHQLVHSRLCYEMALLLGLRHRHLNSQLQVTKSLCHFYSSVSPNPDACITYHEHWLALA
QQLRDREMEGRLLESLGQLYRNLNTSRSLRRSLACIKESLRIFVDLGEKDKAAEAWLGAG
RLHYLMQEDELVELYLQPFLFHQEAIQTALRSEEPSLALKLYEEAGDVFFNGTRHRHRAV
EYYRAGAVPIARRMKALRTELRIFNKLAELQISLEGYEKALEFATLAARLSVLTGDQKQE
LVAFHRLATVYFSLNMYEMAEDCYLKTLSLCPPWLQSPKEALYYAKVYCRLGRLTFYQLK
DAHDATEYFLLALAAAVLVGDEELQDTIQNRLDSICQSPLWHSNPLGCSSERARWLSGGS
LAL
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
atggtgcacacatgggtggctgcttctgtatccctggggagcggagtctaccctggggcc
cagtttggagtttcccattctgggtgcaaaaaaggcagtgaagtctgtggagcatctact
tttcctcaagaagcaggctgtaaagaaggtccttccaaggatccacctggattgactgag
ggcacacgctcacttgaaaacaagggaaaatgtttcctgctacagaatatgactcaagag
ctggtgctctcattctcggtgaagagtcgctccaggaggtgcgtcaacgcagccttacag
gaagctgcgcggaggcgactctgggccctggagaatgaagcccatgaagtccatgcgctg
tttaaggatctctctgcaaggctcgtgagtgtccagtcccagaaggaccagttcctcatc
accttcaagaccctggaggaaatctggaagttttccacgtacctgaacttaggctatgtg
tccgcgtgtctggaacacctcttctttgaccacacgtactggctcaacaacaggcttgtg
gacgacacagagatccaagtgtctgtggatgataatcatctggaaaacatatacctaggc
ctcctgctgcaggaaggtcacttcttctgcagagccatgtgctctgtagctcagccagct
gacaaggaaggagattatctgacactgtgcaggaacgagctgatctccgtgctctccggg
gacggatctgagtgggaaggcgtgtccttagtgacgggccagaggggcctggtgccggtg
tcagccctggagcccctgcctatcccttttcaccaatggttcctgaagaataacccagga
atctgcggcccttccaggaagagaggctggacaggctccggtcagatcggcagaggacgg
tgcaaggctctgatggactatgagcaggaggaaagggacgaactatgtttcctccagggt
gaaagcatcgaagtcattggctttgtcatacctgggctgcagtggttcattgggaagtca
atgagctcaggagaagtgggctttgtccccaccaggagcatagatctggattcctgttcc
ccagtgagcaagaactctgtctttttcagtgatgaggaaaggtgttctctctggtcccca
ggaagtgacaggaaggctgagtgttccggcttcctgtgtgcgcttgctcatactgacatc
acttctatttaccggctgagtgaatttgagtccatccagaatctccagaatgatctgaac
gcatctcagcctgagggcttcagggaggccaggtctggtgggacctggatggagcggcag
accatgggctccagacgttccagcagttctatagattccagccttgaggaggagctcatc
tcagcctcctcagacagctatcaccttccagagcctgatgacctcgatgacccggaactg
ttcatggacctgagcactagcctggatgaggatgagatggagcactttgctcccatcttg
gcttttctagatcatgaaggctacactgaccacttcaaaagcctctatgatttctccttc
tcttttcttacttcctccttttacagcttccccgaggaggatgagctagtggcctaccta
gagacttcaaggaaatgggctaagatgagtcacatgacgtgggcccacgcccggctctgc
ttcctcctgggccgactaagcatcaggaagaccaaactttcccaggccagggtatacttt
gaggaggccatccgagtacttgatggggcatttgaggacctttccctggtggctgctcta
tacatcaacttggctgctatctacctgaggcagaggctaagacataaagggccaaccttg
cttgaaaaggcaggcgctctgctggcctgcctgccagaccatgagttcagtgccaagaac
gagcttgacgtcgtggcttatgtgcttcgccaagggatcgtggtggggagcagccctctg
gaggccaggtcctgtttcctggccatccggttgctcctgagtcttggccggcatgaggaa
gttctgccatttgcagagcgtctgcaactcctttctgggaactcttctgcttccgaggct
acagccaccatgttgagttctctgtatgacaagaaatatcttccacatcttgcagtggcc
tctgttcagaagcgtggttcccagagtgcccgggggatgtctgtttccatttggcaggcc
tatttagttctccagaatgccactaaaatcctgggtgttccttcttcaagatggtgtgag
gtttctgccctggcctgcccaaccctcaggcaggccctggctgcctgtgaggaacagact
gacctgaacatccagaggaccttgtgtctcatcctgtctaaaatgtacctccagcacaga
tctcctgatggttctgtccactatctgagccaggcccacatgttagggaaactcctgggc
gaagaggaagcctttgaatcttccctctgtctggcgtgggcttatctcttagccaggcag
gcaaagaaggctttggagatccttgaaccactactatgttccttgagggagacagagtgt
gtgacccagaggggagtagtccataaccttctgggacttgcatttcaagatgaaggccgg
acaagcagggcagccaagagctacctccgagcattgatccgagctcgggagatggggaat
atacgtaaccaggccgtgtctatggccaatcttggtcacttgacactcaagtcctgtatg
cagcagtcagccaggggttatctcctgcaggctgtccggctgtattctgaactgcaagcc
agcaaggagacagacatggagttggtgcaagtgttactgtggttgggccaagctctggtg
tctggacaccagctggtccatagccgcctttgttatgaaatggcattgctgcttggctta
aggcaccggcacctaaacagtcaacttcaggtcaccaaatccctctgccatttctacagc
tcagtgtccccaaaccccgatgcgtgcattacctatcatgaacactggctagccctggct
cagcaactcagggatcgggagatggaggggcggttactggagtcccttggacaactttat
aggaacctaaatacatccaggtccctcagaaggtcccttgcctgcatcaaggagagcctg
cgtatattcgtcgacctaggggagaaagacaaggctgctgaggcctggctgggagccgga
cgcctgcactacctcatgcaggaagatgagctggtggagctgtatttgcagccatttttg
ttccaccaggaggccatccagacagccttgaggtcagaagagccatcccttgctctcaag
ctttatgaagaagcaggcgatgtgttcttcaatgggacccgccatagacaccgtgcagtg
gagtattaccgggctggggctgttcctatagcgaggagaatgaaggcactccgaacggag
ctgcggatcttcaacaagctggcggagctgcagatcagcctcgagggctatgagaaagct
ttggaatttgccaccctggctgccaggctgagtgttctcacaggagaccagaagcaggag
ctggtggctttccatcgcctggctactgtgtacttctctttgaacatgtatgagatggct
gaagactgttacctgaagactctgtccctgtgcccaccatggctgcagagtcccaaggaa
gcgctgtactatgccaaggtgtattgtcgcctgggccgactcactttctaccagctgaag
gacgcccatgatgctactgaatactttctgctggcgctggcggctgcggtcctggtgggt
gatgaggagctgcaggacaccattcagaacaggctagacagcatctgccagagtcccttg
tggcacagcaatcccttggggtgctcttcagagagggcacggtggctcagtggtgggagc
ctggccctctga
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