Apodemus sylvaticus (European woodmouse): 127663771
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Entry
127663771 CDS
T10613
Symbol
Dsg1
Name
(RefSeq) desmoglein-1 isoform X1
KO
K07596
desmoglein 1
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04382
Cornified envelope formation
asyl05150
Staphylococcus aureus infection
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
127663771 (Dsg1)
09160 Human Diseases
09171 Infectious disease: bacterial
05150 Staphylococcus aureus infection
127663771 (Dsg1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
asyl04515
]
127663771 (Dsg1)
Cell adhesion molecules [BR:
asyl04515
]
Cadherins
Major cadherins
127663771 (Dsg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Motif
Other DBs
NCBI-GeneID:
127663771
NCBI-ProteinID:
XP_052011442
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All DBs
Position
13:complement(85341297..85370701)
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AA seq
1060 aa
AA seq
DB search
MDWRSFSTAALLAFLVVLEVNSEFQIQVRDHNAQNGTIKWHSIRRQKREWIKFAAACREG
EDNSKRNPIAKIHSDCAANQPVTYRISGVGIDQPPYGIFIINQKTGEINITSIVDREVTP
YFIIYCRALNAQGQDLENPLELRVRVMDINDNPPVFSMTTYVGQIEENSNANTLVMKLSA
TDADEPNNLNSMIAYKIIRQEPSESSMFLINRKTGEIRTMNNFLDREQYSQYSLVVRGSD
RDGGADGMSAECECSISILDVNDNIPYFDQSSYDIKIEENALHSQLMEIRVIDLDEEFSD
NWKAIIFFISGNDGNWFEIEMNERTNVGILKVVKPLDYEAMKNLQLSIGVRNVAEFHQSI
ISQYKLTATMITVTVLNVVEGSVFRPGSKTFEINGKMDANYKVGKFVATDLDTGVDSTNV
RYVMGNNPENLLAVDSRTGVITLRNRVTMEQYQRLNGRYEGTLLSIDDSLQRTCTGTIVV
RLSGSVWDQDANGGGSGSGGSSGGTSGGTSGGDREDGQVTNGYQGTSTEGPQRTTGTWQG
GEYSTPSRQNIEDPDLVENSFDNVHLGPAGIGLLVMGFLILGLVPFLLICCDCGGAPGGG
AGFEPVPECSDGAIHTWAVEGPQPEPHDGITTICVPQMPPGNANIIECIDNSGVYTNEYC
GREMQDLGGGERTTGFELMDGVKTSAAPEICQEYSGTLRRNSMRECRDGGLNMNFMESYF
CQKAYAYADEDEGRPSNDCLLIYDIEGVGSPAGSVGCCSFIGEDLDESFLDTLGPKFKKL
ADISLGKEIDSYPDPDPSWPPQSTEPTCPQHTELASGHPPISPHFGTTTVISENTYPSGP
GVQHPMPIPDPLGYGNVTVRESYTTSGTLKPSVHFHDNRQASNVVVTERVVGPISGADLH
GMLEIPDLRDGSNVIVTERVIAPGSSLPTSLTIPNPRETSNVVVTERVIQPTSGMIGNLS
MPTELSNAHNVIVTERVVSGAGVSGIAGTAGLGGVGGIGSSGLVSTTVGDGGTGLSMGGT
ATIGHMRSSSDHHFSQTVGSASPSMARSRITKYSTVQYTK
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atggactggcgctccttcagcacagctgccctgctcgctttcctggtggtgcttgaagtt
aacagtgaatttcaaatccaggtaagagatcataatgcccaaaacggtaccatcaaatgg
cattccatcagaaggcagaaacgagaatggatcaagttcgctgcagcctgtcgggaaggt
gaagacaactcaaaaagaaacccaattgccaaaattcattcagattgtgctgcaaaccaa
ccagtgacataccgcatctctggagtgggaattgaccagccaccttatggaatctttatt
attaatcaaaaaaccggtgaaatcaatataacatccattgttgatcgtgaagtcactccc
tatttcattatctactgccgagcactgaatgcacaaggtcaagatttggagaatccactg
gagctcagagtcagagtgatggatataaacgacaaccctcccgtgttttccatgactaca
tatgtaggacaaatagaagaaaattctaatgcaaacacactggtcatgaagctcagtgct
accgatgctgatgagccaaataacttgaactcaatgatagcctacaagatcataagacag
gagccttctgaatcatcaatgttcctcatcaacagaaaaactggagaaatcagaacaatg
aataactttctagacagagagcaatatagccagtattcccttgtggtgagaggctcagac
cgtgacggtggggcagacggcatgtctgcggaatgcgagtgcagcatcagcatcctggat
gtcaatgacaacatcccgtactttgatcagtcatcttatgacatcaaaattgaagaaaat
gcactgcactcccagctaatggagatcagagtcattgatctggatgaagaattctcagac
aactggaaggcaataattttctttatctctggaaatgacggaaattggtttgaaatagaa
atgaatgaaagaacaaatgtaggaattctgaaggttgtcaagcccttagattatgaagcc
atgaagaatctacagcttagtattggtgttcgaaatgtagctgaattccaccagtcgatt
atttctcaatataaactcacagcaactatgatcaccgtgactgtgctaaatgtggtcgag
ggctccgtgttccggccaggttcaaagacatttgaaataaacggtaaaatggacgcgaat
tacaaagtgggaaagtttgtagcgacagacctggacacgggtgtagattccacaaatgtt
agatacgtcatgggaaataacccagagaacctgctggctgttgattcaagaacaggcgta
ataactttaagaaatagagttactatggagcaataccaaaggctgaatgggagatatgaa
ggaacactgctatcaatagatgattcccttcagaggacctgcactgggacaattgtcgtt
cgtcttagtggctctgtctgggaccaagatgcaaacggcggtggcagtggcagtggcggt
agcagtggcggtaccagtggtggtaccagtggcggtgaccgtgaggacggccaagtgact
aatggatatcaaggcacttccactgagggaccgcaacgcaccacaggaacatggcaaggc
ggagagtacagcactccctctaggcaaaatatcgaagaccccgatctagttgaaaactcg
ttcgacaacgttcacctaggtcctgcaggcatcgggctgctcgtcatgggtttcctaatc
ttgggattggttccattcttgctgatctgctgtgattgtggaggggcccctggtggtgga
gctggatttgaacctgttccagaatgttctgatggagcaattcacacgtgggctgtagaa
gggccacagccggaaccccatgatggtataaccaccatctgtgtgccacaaatgccacct
ggtaatgccaatattatagaatgtattgacaactcaggagtttatacaaatgaatactgt
ggcagagaaatgcaagatcttggaggaggagaaagaactacaggatttgaactaatggat
ggagttaaaacatcagctgcacctgagatatgccaagaatattcaggaacattaagaaga
aattcaatgagagaatgtagagatgggggtctcaatatgaatttcatggaaagctatttc
tgccagaaagcctacgcttatgcggatgaggatgaaggccgtccgtccaatgactgcttg
ctcatctacgacatcgaaggtgtgggctcccctgcaggctccgtgggctgctgcagcttc
attggagaagatctagatgaaagctttctggataccttggggcccaagtttaagaagttg
gcagatatcagcctgggaaaagaaatagactcatacccagatcctgatccttcttggcct
cctcagagcactgaaccgacgtgcccccagcacacagagcttgctagtggacacccaccc
atctccccacattttggcactaccacagtcatttctgagaacacctacccctctggccct
ggagtacagcatcctatgccaattcctgatcctctgggctatggtaatgtcactgtgagg
gagtcctataccacctctggcactctgaaaccctctgtccactttcatgataaccggcag
gcttccaatgtggtggtgacagagagggtggtgggccccatctctggcgctgatttgcat
gggatgttagagatacccgacttaagagatggatcaaatgttatagtgacagaaagggta
atagcacccggctcaagtctacccacctctctaaccattcctaaccctcgagagacctca
aatgtagttgtgacagaaagagtgatccaaccaacttctggcatgattggcaacctgagc
atgcccactgagttatcaaatgcccacaacgtgattgtgacagagagagtggtgtctggt
gccggtgtgagtggaattgctggcactgctgggttaggtggggttggaggcataggcagt
agtggcctagttagcaccaccgtgggtgatggcggcactgggttgagcatgggagggaca
gccactattggccacatgaggagttcctctgatcatcactttagccaaacagtaggatct
gcctcccctagcatggctcgaagtcgaatcacgaagtacagtacggtacagtataccaag
taa
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