Apodemus sylvaticus (European woodmouse): 127664258
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Entry
127664258 CDS
T10613
Symbol
Nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl03013
Nucleocytoplasmic transport
asyl05014
Amyotrophic lateral sclerosis
asyl05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127664258 (Nup98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
127664258 (Nup98)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
127664258 (Nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asyl03019
]
127664258 (Nup98)
03036 Chromosome and associated proteins [BR:
asyl03036
]
127664258 (Nup98)
Messenger RNA biogenesis [BR:
asyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127664258 (Nup98)
Chromosome and associated proteins [BR:
asyl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
127664258 (Nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
127664258
NCBI-ProteinID:
XP_052012085
LinkDB
All DBs
Position
1:103612479..103703966
Genome browser
AA seq
1816 aa
AA seq
DB search
MFNKSFGTPFGGGTGGFGTTSTFGQNTGFGTTSGGAFGTSAFGSSNNTGGLFGNSQTKPG
GLFGTSSFSQPATSTSTGFGFGTSTGTSNSLFGTASTGTSLFSSQNNAFAQNKPTGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPSSFTAAPTGTTIKFNPPTGTDTMVKAGVST
NISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQNQVGAGTTAGLFGSSPATSSATGL
FSSSTTNSAFSYGQNKTAFGTSTTGFGTNPGGLFGQQTQQTTSLFSKPFGQATTTPNTGF
SFGNTSTLGQPSTNTMGLFGVTQASQPGGLFGTATNTSTGTAFGTGTGLFGQPNTGFGAV
GSTLFGNNKLTTFGTSTTSAPSFGTTSGGLFGNKPTLTLGTNTNTSNFGFGTNSSGSSIF
GSKPAAGTLGTGLGTGFGTALGAGQASLFGNNQPKIGGPLGTGAFGAPGFNTSTAILGFG
APQAPVALTDPNASAAQQAVLQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAA
QKALTTPTHYKLTPRPATRVRPKALQTAGPAKSHLFDGLDDDEPSLANGAFMPKKSIKKL
VLKNLNNSNLFSPVNHDSEDLASPSEYPENGERFSFLSKPVDENHQQDGDDDSLVSRFYT
NPIAKPIPQTPESVGNKNNSSSNVEDTIVALNMRAALRNGLEGSSEETSFHDESLQDDRE
EIENNAYHIHPAGIVLTKVGYYTIPSMDDLAKITNEKGECIVSDFTIGRKGYGSIYFEGD
VNLTNLNLDDIVHIRRKEVIVYVDDNQKPPVGEGLNRKAEVTLDGVWPTDKTSRCLIKSP
DRLADINYEGRLEAVSRKQGAQFKEYRPETGSWVFKVSHFSKYGLQDSDEEEEEHPPKTT
SKKLKTAPLPAAGQAATFQMTLNGKPAPPPQSQSPEVEQLGRVVELDSDMVDITQEPVPD
SVLEESVPEDQEPVSASTHIASSLGINPHVLQIMKASLLVDEEDVDAMDQRFSHFPSKGE
TVQEICSPRLPISASHSSKPRSIVGGLLQSKFASGTFLSPSASVQECRTPRTSSLMNVPS
TSPWSVPLPLATVFTVPSPAPEVQLKTVGIRRQPGLVPLEKSITYGKGKLLMDMALFMGR
SFRVGWGPNWTLANSGEQLHGSHELENLQVADSVEYGFLPNPVAVKSLSESPFKVHLEKL
GLRQRKLDEDLQLYQTPLELKLKHSTVHVDELCPLIVPNPGVSVIHDYADWVKESPRDLL
ELPIVKHWSLTWTLCEALWGHLKELDSQLDEPSEYMQTLERRRAFSRWLSHTAAPQIEEE
VSLTRRDSPIEAVFSYLTGSRISEACCLAQQSGDHRLALLLSQLVGSQSVRELLTMQLAD
WHQLQADSFIHDERLRIFALLAGKPVWQLSEQKQINVCSQLDWKRTLAVHLWYLLPPTAS
ISRALSMYEEAFQNTSEGDKYACSPLPSYLEGCGCMVEEERDSRRPLQDVCFHLLKLYSD
RHYDLNQLLEPRSITADPLDYRLSWHLWEVLRALNYTHLSEQCEGVLQASYAGQLESEGL
WEWAIFVFLHIDNSGMREKAVRELLTRHCQLSETPESWAKETFLTQKLCVPAEWIHEAKA
VRAHMESNKHLEALYLFKAGHWNRCHKLVIRHLASDAIINENYDYLKGFLEDLAPPERSS
LIQDWETSGLVYLDYIRVIEMLHRIQQVDCSGYELEHLHTKVTSLCSRIEQIPCHSAKDR
LAQSDMAKRVANLLRVVLSLQHAPDATSSSTPDPQRVPLRLLAPHIGRLPMPEDYALEEL
RGLTQSYLRELTVGSQ
NT seq
5451 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaatcatttggaaccccctttgggggtggcacagggggctttggcacaacg
tcaacatttggacaaaatactggctttggtactactagtggaggagcatttggaacatct
gcatttggttctagcaacaatactggaggcttatttggaaattcacagaccaaaccagga
ggattatttggtaccagttcatttagccagccagcaacttccacaagcactggttttggg
tttggcacatcaacaggaacatcaaatagtttgtttggaactgcaagcacagggaccagt
cttttctcatcccagaacaatgcatttgcacaaaataaaccaactggctttgggaatttt
ggaaccagtactagcagtggaggactctttggaactacaaacaccacctctaaccccttt
ggcagtacatctggctccctctttgggccaagtagttttacagcagcacctacaggaact
actatcaaatttaatcctcccactggtacagatactatggtcaaagctggagttagcact
aacatcagtaccaaacatcaatgtattactgctatgaaagaatatgaaagcaagtcatta
gaggaacttcgtttggaggattatcaggctaaccggaaaggcccacagaaccaagtggga
gcaggtaccacggctggcttatttggatcttctccagcaacttccagtgcaacaggactc
ttcagctcctccaccactaattcagccttttcatatggtcagaacaaaactgcctttgga
actagcacaactggatttggaacaaatccaggtggtctctttggccaacagactcaacag
actaccagtctcttcagcaaaccatttggccaggctacaaccaccccgaatactggcttt
tcctttggtaataccagcacccttggacagccaagcaccaatactatgggcctatttgga
gtaacccaagcctcacaaccaggaggtctttttgggacagctacaaacaccagcactggg
acagcatttgggacaggaacaggtctctttgggcagcccaatactggatttggtgcagtt
ggttcgaccctgtttggcaataacaagcttacaacttttggaaccagcacaaccagtgct
ccttcatttggtacaaccagtggcgggctcttcggtaacaaaccaaccctgactttagga
accaatacaaacacttccaattttgggtttggcacaaatagcagtgggagtagtattttt
ggaagtaagccagcagctgggactctgggaactggacttggtacgggatttggaacagct
cttggtgctggacaggcatctttgtttggaaacaaccaacctaagattggagggcctctt
ggtacaggagcctttggggcccctggatttaatacttcgacagccattttgggctttggc
gccccccaggccccagtagctttgacagatccaaatgcttctgctgcccagcaggctgtt
ctccagcagcacctcaatagtctaacatactcaccctttggagactcccctctcttccgg
aatcctatgtcagatcctaagaaaaaagaagagagactgaaaccaaccaatccagcagct
cagaaagctcttacaacacctactcattataaactcacacctcgccctgctaccagagtc
aggccaaaggctttgcaaacagcaggtccagccaaatcacatctctttgatgggctggat
gacgatgaaccttctctagccaatggagcattcatgcctaaaaagagcatcaagaagttg
gttttgaaaaatcttaacaatagcaatctcttttctcctgttaatcatgattcagaagat
cttgcctcaccctctgagtatccagaaaatggagagagatttagcttcctgagcaaacct
gttgatgagaaccatcagcaggatggagatgatgactctctggtatcacgattttacact
aatcctattgctaaacccattcctcaaaccccggagagtgttggaaacaaaaataacagt
agcagcaatgtggaagacaccattgttgctttgaacatgcgtgctgctttgcgcaatgga
ctggaaggaagcagtgaagaaacgtctttccatgatgagtcattgcaagatgaccgagaa
gagatagaaaataatgcttaccatatacatccagcaggcattgttctcacaaaggttggt
tattatactatcccatctatggatgaccttgctaaaattaccaatgagaagggagaatgc
attgtttctgacttcaccattggccgtaaagggtatggctcaatctattttgaaggagat
gtgaatttgacaaatctaaatttggacgacattgtgcatatccggaggaaggaagttatt
gtctatgtagatgataaccaaaagccacctgtgggtgaagggctaaataggaaggctgaa
gttactttggatggagtttggccaacagataaaacatcccggtgtttaataaagagtcca
gatcgacttgccgatatcaattatgaggggagattagaagcagtttcaagaaagcaaggg
gcccaattcaaggagtatcggcctgaaactggttcttgggtatttaaggtctcccacttt
tctaagtatggccttcaggattctgatgaagaagaggaggaacacccacccaaaactact
tcaaaaaagctgaagactgcccctttgcccgctgcaggccaggcagccactttccagatg
actcttaatggcaaacctgcacccccacctcagagccagagcccagaagtggagcagtta
ggcagggttgtggaactggacagcgacatggtagacatcacccaggagccagttccagat
tctgtgttagaagagagtgtgcctgaggatcaggagcctgtgtctgcctcaacgcatatt
gcatcttcactgggaattaatccacatgttttacagatcatgaaagcatcattgcttgtt
gatgaagaagatgtagatgccatggatcaacgcttcagtcacttcccttccaaaggagag
actgttcaggaaatctgttctcctagactccccatttcagcctcccattcatcaaaaccc
cgctccatagttggtgggttgctgcaatcaaaatttgcaagtggaacttttctttcacca
agtgcctctgtgcaagaatgtcgcactcccaggacatcatctctcatgaacgtcccatcc
acatccccctggtctgtccctctgcccctggccactgtgttcacagtgcccagcccagcc
cctgaggttcagctaaaaacagtgggcatacgcaggcagccaggcctagtccctcttgaa
aaatccattacgtatggtaagggcaaactcttgatggacatggctctgttcatgggacgt
tcatttcgggttggttggggtcccaactggactcttgctaatagtggagaacagctgcat
ggctctcatgaactggaaaatcttcaggttgccgattctgtggaatatggattcctgccc
aatccagtagctgttaaatctctatctgaatccccattcaaagttcatttggaaaaactt
ggcttaagacagaggaagctggacgaagatctgcagttataccagacacctctagagctc
aaattaaaacatagcactgtccatgtagatgagctgtgtcctctcattgtccccaatcct
ggggtttcagtcattcatgattatgcagattgggttaaggaatcacccagagatttactg
gaactaccaattgtgaagcactggagcctgacatggacattatgtgaagctctgtggggc
cacctaaaggagctggacagccagctggatgaacccagcgaatacatgcagacgctggag
cgaagaagagctttttcccgctggctgtcccatactgctgcacctcagattgaagaggaa
gtctccttaacccgcagagacagtcccatagaggccgtcttcagctacctcacgggcagt
aggattagtgaggcctgttgtctggcacagcagtcaggtgatcatcgccttgcccttctt
ttgtctcagttggtgggaagccaatcagtgcgggagctgctcaccatgcagttggccgat
tggcatcagctccaggctgactccttcatccacgatgagcgcttgcgcatattcgccctg
ttagctggaaaaccggtgtggcagctctcggaacagaaacaaatcaatgtgtgctctcag
ctagactggaaacgaacacttgctgtccatctttggtatttgcttccaccaaccgcctcc
atttccagggctctcagcatgtatgaagaagcatttcagaatacttctgagggtgataaa
tatgcctgctcccctctcccttcttacctggagggctgtggctgtatggtagaggaagaa
agagactcccggagaccacttcaagatgtttgctttcatcttctaaaactctacagtgac
agacattatgatctcaatcagcttttggaaccccgaagcataactgctgatcctttggac
taccgcctaagctggcacctttgggaagttcttcgtgctcttaactatacccatctctca
gaacagtgtgaaggtgtgctacaggccagttatgctggccaactggaaagtgaaggactc
tgggagtgggctatctttgtcttcctgcacattgacaactctggcatgcgtgagaaggct
gttcgagagctgctgacccgccactgccaactgtcagagacccctgagtcttgggctaag
gagactttccttacacagaagctttgtgtgcctgctgagtggattcatgaggccaaagca
gttcgagcacacatggaatccaataagcacttggaggccctctatttatttaaagctggt
cactggaaccgctgccacaaattagtcattcggcacttagcttctgatgccattattaat
gaaaactatgactacctgaaaggattcttagaagatctggcccctccagagcgcagcagc
ctaatccaggactgggaaacatctgggctcgtttacctggattatattcgagtaattgaa
atgctccaccgtattcaacaggtggactgctcaggctatgaactagagcacctacatacc
aaagtgacttcactgtgcagccggatagagcagatcccgtgtcacagtgccaaggatcgc
ctggctcagtcagatatggccaagcgggtagccaacttactgcgggtagtactgagcctt
cagcatgctcctgatgccacctccagctcaacgccagaccctcagcgagtccctttacgt
cttttggctccccacattggcaggctgcccatgcctgaggactacgccttggaggaactg
cgaggccttacccagtcctaccttcgagaactgactgttgggagccagtga
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integrated database retrieval system
