Apodemus sylvaticus (European woodmouse): 127664390
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Entry
127664390 CDS
T10613
Symbol
Ddx46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127664390 (Ddx46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
asyl03041
]
127664390 (Ddx46)
Enzymes [BR:
asyl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127664390 (Ddx46)
Spliceosome [BR:
asyl03041
]
Complex A
U2 snRNP components
U2 related factors
127664390 (Ddx46)
Complex B
127664390 (Ddx46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
CdAMP_rec
FAM176
Motif
Other DBs
NCBI-GeneID:
127664390
NCBI-ProteinID:
XP_052012276
LinkDB
All DBs
Position
14:complement(11875739..11919470)
Genome browser
AA seq
1032 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRS
RSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGSKSKKAENRSRS
KEKADGGDSSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAME
NIGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEGNEMEDEELDPLDAYMEEVKEEVK
KFNMRSVKGGAGNEKKSGPTVTKVVTVVTTKKAVVDADKKKGELMENDQDAMEYSSEEEE
VDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGI
TVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGS
GKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVY
GGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFE
PQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVI
EEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDS
IINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAY
TFITEDQARYAGDIIKALELSGTAVPPDLEKLWSDFKDQQKAEGKIIKKSSGFSGKGFKF
DETEQALANERKKLQKAALGLQDSDDEDAAVDIDEQIESMFNSKKRVKDMAAPGTSSVPA
PTAGNAEKLEIAKRLALRINAQKNLGIESQVDVMQQATNAILRGGTILAPTVSAKTIAEQ
LAEKINAKLNYVPLEKQEEERQEGGQSESFKRYEEELEINDFPQTARWKVTSKEALQRIS
EYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQNS
YQPTNKGRYKVL
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgggccgggagtctcgccactaccgcaaacggtcagcatcacgaggtcgctccgggagt
cggtctaggagtcgctcaccctctgacaaaagaagcaaacgtggagatgacagacgttcc
aggagtcgggatagagacagaaggagagagagatctcggagtagggacaaaagaagatct
cggtcaagggacaggaagcgcctgaggcgctccagaagtagagagcgtgacagaagcaga
gagcgaaggagatctcgcagccgagatagaaggcgctcacggagccgaagccggggcagg
cggtcccggtcctccagtcctggcagcaagagcaagaaggctgagaataggtccaggtcc
aaagagaaagcagatggcggggacagctccaaggagaagaaaaaggacaaggatgacaag
gaggatgagaaagagaaggatgctgggaactttgaccagaataagctggaagaagaaatg
agaaaacgaaaagaaagagttgaaaaatggcgcgaagagcaacgtaagaaggcgatggag
aacataggggagctgaagaaggagattgaggagatgaagcaggggaagaagtggagcttg
gaggatgacgacgatgatgaggatgatcccgccgaggctgagaaggaaggcaacgagatg
gaggacgaggagttggacccgctggatgcctacatggaggaagtgaaagaagaggtcaaa
aagttcaacatgaggagtgtgaaaggcggagcgggaaatgagaagaagtctgggccaaca
gtcacgaaagttgttactgtggtaacgaccaagaaagctgtagtagatgccgataagaag
aagggagaactgatggagaatgaccaggacgccatggagtactcctcagaggaggaagaa
gttgaccttcaaacagccctcacgggctaccagacaaaacagagaaaacttctagaacca
gttgatcatggaaaaattgaatatgagccattcaggaaaaacttttacgttgaagttcca
gaattagcaaaaatgtctcaagaagaggtgaatgtgttccgattggaaatggagggcatt
acagttaaaggaaaaggttgccccaagccaattaaatcatgggtccagtgtggaatttcc
atgaagatcctaaattccctcaaaaagcatggctatgaaaagcccacaccaatccaaact
caagccattcctgctataatgtctggacgagatttgattggcattgccaagacaggaagt
ggaaaaaccattgcttttcttttgcccatgtttagacacatcatggatcagaggtcattg
gaagaaggagagggaccaatagctgtcatcatgactccaactcgagaactggctttacag
atcactaaagaatgtaagaagttttcgaagaccttgggactgagagtggtctgtgtgtat
ggagggacaggaatcagcgagcagattgctgagctgaaaagaggtgctgaaattattgtt
tgcacacctggtcgaatgattgacatgttagcagctaacagtggtcgggtcacaaatctt
cgaagagtgacgtatgttgttttagatgaagcagacaggatgtttgacatgggttttgaa
ccacaggtcatgcgcattgtggataatgtccgtcctgaccggcagacagttatgttttca
gccactttccctagagctatggaggctctggcccgcaggatcctgagcaaacccattgag
gttcaggttggaggcaggagtgtggtttgctcagatgtggagcaacaagtgattgtgatt
gaagaagaaaagaaattcttgaaattactagagcttttaggccattatcaggagtcggga
tctgtcattatatttgtggataagcaggagcacgctgacggtcttctgaaggacttgatg
agagcatcgtacccttgcatgtctcttcatggaggtattgatcagtatgacagggacagt
atcataaatgactttaagaatggaacctgcaagcttttggttgccacgtctgttgccgct
cgtggtctcgatgtgaagcatctcattcttgtcgtgaattacagctgccccaaccattat
gaagattacgtgcacagagctgggcggactgggagagcaggcaacaagggctatgcctac
accttcatcacagaggatcaagctcgatacgcaggggacatcattaaagctcttgaatta
tcagggacagcagtgcctcctgacctagaaaagctctggagtgacttcaaagatcaacag
aaagctgaaggaaaaataattaaaaagagtagtggcttctctggcaagggattcaagttt
gatgaaacagaacaggcgttggccaatgagagaaaaaagctacagaaagccgcccttggc
ctgcaggactctgatgatgaggatgccgcggtcgatattgatgaacagattgaaagcatg
tttaattcaaagaaaagagtgaaggacatggctgcccccggcacatctagtgtgcctgct
ccaacggcaggcaatgccgagaagctagaaattgctaagagactggctctcagaatcaac
gctcagaaaaacctgggcatcgagtctcaggtagacgtgatgcagcaagccaccaatgcc
atcctcagagggggaactatcctggctcccactgtgtctgcgaaaactattgcagagcag
cttgcagagaagatcaacgccaagcttaattacgttcctctggagaagcaggaagaagag
aggcaggagggtgggcagagcgaatctttcaagagatacgaggaagaattagaaattaac
gacttcccacagacggcgaggtggaaagtcacctctaaggaagctctgcagaggatcagt
gaatactctgaagccgccatcacaatcagagggacctacttccctcctggcaaggagccc
aaagaaggagagcggaagatctacttggcaattgaaagtgccaacgaactggctgtgcag
aaggcgaaggcggagatcaccaggctcatcaaagaagaactgatccgactgcaaaattca
tatcaaccaaccaacaaaggacgatacaaagtattataa
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