Apodemus sylvaticus (European woodmouse): 127664670
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Entry
127664670 CDS
T10613
Symbol
Cdkal1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase isoform X1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
asyl03016
]
127664670 (Cdkal1)
Enzymes [BR:
asyl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
127664670 (Cdkal1)
Transfer RNA biogenesis [BR:
asyl03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
127664670 (Cdkal1)
Prokaryotic type
Methylthiotransferases
127664670 (Cdkal1)
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-GeneID:
127664670
NCBI-ProteinID:
XP_052012707
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Position
14:36884708..37420336
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AA seq
578 aa
AA seq
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MPSASCDVLLDDIEDIISQEDSKPQDRHFSRKHVFPKVRRRNTQKHLQEEPRPPSDSTIP
GIQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITENASDADLWLLNSCTVKNPAEDHFRN
SIKKAQEENKKVVLAGCVPQAQPRQDYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQ
KKDNGRRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGNLASYPTDELVER
AKQSFQEGVCELWLTSEDTGAYGRDIGTDLPTLLWKLVEVIPEGAMLRLGMTNPPYILEH
LEEMAKILNHPRVYSFLHIPVQSASDSVLMDMKREYCVADFKRVVDFLKEKVPGITIATD
IICGFPGETDQDFQETVKLVEEYRFPSLFINQFYPRPGTPAAKAEQVPAHVKKQRTKDLS
RVFHSYNPYDHKIGERQQVLVTEESFDSKFYVAHNRFYEQVLVPKNPAFMGKMVEVDIYE
SGKHFLKGQPVSETRVYTPSISKPLAKGEVSGLTKEFRNRLGNHVNSTSDTCPAAPRGSA
YSRMALQMSRYDCALKVAAGLALVALLLHFWPESMLTM
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgcatcctgtgatgtactgctggatgacatagaagatatcatatcacaggaa
gattcgaagccacaagacagacatttctcaagaaagcatgtgtttcctaaagtacgaagg
cgcaatacccagaaacatttgcaagaagagcccaggccaccaagtgacagcactattcca
ggcatacagaaaatttggatacgaacatggggctgctcacataataattcagatggagaa
tacatggctggacagcttgctgcctatggctataaaattacagaaaatgcatcagatgca
gatttgtggctcctgaacagctgtactgtgaaaaatccagctgaagaccactttagaaac
tcaatcaaaaaagctcaagaagagaataagaaagttgtcctcgctggctgtgtcccccaa
gcccagcctcgtcaggactacctcaaaggactgagcatcatcggggttcagcagatagat
cgtgtggtagaagttgtggaggaaacaataaaaggtcactcagtgaggctgctgggccag
aagaaagacaatgggaggcggttgggtggagcaagactggatttgccgaagatcagaaag
aatccgctgatagaaatcatttccatcaacacagggtgtctcaatgcttgtacctactgc
aaaactaaacacgccagaggaaacctggccagctatcccactgatgaactcgtggagaga
gccaagcagtcctttcaagagggtgtttgtgagctatggctgaccagtgaggacaccggc
gcctatggcagagacattggcacagacctccccacgctcctgtggaagttggtggaagtg
attcctgagggagccatgctgaggctgggcatgacgaatccaccatatattttagagcat
ctggaggaaatggcaaaaatcctcaaccaccccagagtctactccttcctccacatccca
gtgcagtccgcctctgacagtgtactcatggacatgaagagagagtactgcgtggccgac
ttcaaacgagttgtggattttctcaaggagaaggttcctggaataactattgctacggat
attatctgtggttttcctggagaaaccgatcaggattttcaagaaacagtgaaacttgtt
gaagagtacagatttccaagcctcttcatcaaccagttctatccaagacccggaactccc
gctgcaaaagccgaacaggttccagcacacgtgaaaaaacaaaggacaaaagatctttct
cgggtgtttcattcctacaatccatatgatcacaagattggggaaagacaacaagtgcta
gtcacagaagagtcttttgactccaaattttatgttgcacataaccgattctatgagcag
gttttagtgccaaagaaccctgcattcatggggaaaatggttgaagtcgacatatatgaa
tcaggaaaacactttttgaaagggcagccagtatcagaaaccagagtctatacgccatcc
atcagcaagccgctggccaagggagaagtctcaggtttgacaaaggaattcagaaatagg
cttgggaatcatgtgaactcaacttcagacacctgtcctgcggctccgcgtggctcggcg
tattccagaatggcgctgcagatgtcccggtatgactgtgcactgaaggtggctgcaggc
ctggctctcgtcgctctcctcctgcatttctggccagagtctatgcttacaatgtaa
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