Apodemus sylvaticus (European woodmouse): 127665173
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Entry
127665173 CDS
T10613
Symbol
Atxn1
Name
(RefSeq) ataxin-1
KO
K23616
ataxin 1/1L
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04330
Notch signaling pathway
asyl05017
Spinocerebellar ataxia
asyl05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
127665173 (Atxn1)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
127665173 (Atxn1)
05022 Pathways of neurodegeneration - multiple diseases
127665173 (Atxn1)
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Gene cluster
GFIT
Motif
Pfam:
ATXN-1_C
AXH
PGC7_Stella
Motif
Other DBs
NCBI-GeneID:
127665173
NCBI-ProteinID:
XP_052013575
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Position
14:20972902..21389751
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AA seq
795 aa
AA seq
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MKSNQERSNECLPPKKREIPATSRPSEEKATALPSDNHCVEGVAWLPSTPGSRGHGSGRH
GPAGTSGEHGLQGMGLHKALSAGLDYSPPSAPRSVPTANTLPTVYPPPQSGTPVSPVQYA
HLSHTFQFIGSSQYSGPYAGFIPSQLISPSGNPVTSAVASAAGATTPSQRSQLEAYSTLL
ANMGSLSQAPGHKVEPAPQQHLSRAAGLVNPGSPPPTQQNQYIHISSSPQSSGRAASPPP
IPVHLHPHQTMIPHTLTLGPSSQVVVQYSDAAAAAAGGHFVPRESTKKAESSRLQQAMQA
KEVLNGEMEKNRRYGPSSSVELSLGKASNKSVPHPYESRHVVVHPSPADYSNRDTSGVRG
SVMVLPNSSTSSVDLEAQQATHREASPSTLNDKSGLHLGKPGHRSYALSPHTVIQTTHSA
SEPLPVGLPATAFYAGTQPPVIGYLSGQQQAITYAGGLPQHLVIPGTQPLLIPVGSPDMD
TPGAASAIVTSSPQFAAVPHTFVTTALPKSENFNPEALVTQAAYPAMVQAQIHLPVVQSV
ASPATASPTLPPYFMKGSIIQLANGELKKVEDLKTEDFIQSAEISNDLKIDSSTVERIED
SRSPGVAVIQFAVGEHRAQVSVEVLVEYPFFVFGQGWSSCCPERTSQLFDLPCSKLSVGD
VCISLTLKNLKNGSVKKGQPVDPASVLLKHTKTDSLAGSRHRYAEQENGINQGSAQVLSE
NGELKFPERVGLPAAPFLSKIEPSKPTATRKRRWSAPETRKLEKSEDEPPLTLPKPSLIP
QEVKICIEGRSNVGK
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccaaccaagaacggagcaatgaatgcctgcctcccaagaaacgagagatcccc
gccaccagccggccctctgaggagaaggccactgctctgcccagcgacaaccactgcgtg
gagggcgtggcgtggctccccagcacccctggcagccgtggccatgggagtgggcggcat
gggccagcagggacttccggggagcatggtttacaaggaatgggtttacataaagcactg
tccgcagggctggattactccccacccagtgcccccaggtcagtccccacagccaacacg
ctgcccaccgtgtaccctcctcctcagtcagggaccccggtgtctcctgtgcagtacgcc
cacctctcgcataccttccagttcattgggtcctcccaatacagtgggccttacgcgggc
tttatcccttcccagctgatctccccgtctggcaacccagtcaccagtgcggtggcctcc
gctgcaggggccaccactccctcacagcgctcccagctggaggcctattccaccctgctg
gccaacatgggcagtctgagccaggcaccaggacataaggtcgagcccgctccacagcag
catctcagcagggcagcgggattagtcaacccggggtcccctccacccacccagcagaac
cagtacattcatatttccagctctccacagagctccgggcgggcagcatctcctccaccc
atcccggtccacctccatccccatcagacgatgatcccgcacacgctcaccctggggcct
tcatcccaggtggttgtacagtacagtgacgccgccgccgccgccgccggaggccacttt
gttcctcgagagtccaccaaaaaagcagagagcagcaggttgcagcaggctatgcaagcc
aaggaggtcctgaatggagagatggagaagaaccggaggtacgggccgtcatcgtctgtg
gagctgagcctgggaaaggcaagcaacaagtcagtgcctcatccctacgagtccaggcac
gtggtggtccacccaagcccagcagactacagcaatcgcgatacctccggggtccgtgga
tctgtgatggtcctgcccaatagcagcacgtcctcagtcgacctggaggcacagcaggcc
acgcatcgagaggcctccccgtccaccctcaatgacaagagcggcctgcacctagggaaa
cccggccacaggtcctatgcgctgtccccccacacggtcatccagaccacacacagtgca
tcagagcctctcccggtgggcctccccgccacggccttctacgctggtactcaacctcct
gtcatcggctacctgagcggccagcagcaagcaatcacctacgctggcggcctgccgcag
cacctggtgatcccgggtacccagcccctgctcatcccagtcggcagccctgacatggac
acacccggggcagcctcggccatagtgacgtcatcaccccagttcgctgcagtacctcac
acgtttgtcaccaccgccctgcccaagagcgagaacttcaacccggaggctctggtcacc
caggctgcctacccagccatggtgcaggcccagatccacctgccggtggtgcagtccgtg
gcatcccccgccacggcgtcacccacgctgccgccctatttcatgaaaggctccatcatc
cagctggccaacggggagctgaagaaggtggaggacctgaagacggaggatttcatccag
agtgcggagattagcaatgacctcaagatcgactccagtactgtggagagaatcgaggac
agccgcagcccgggtgtggccgtgatacaatttgctgttggtgaacaccgagcccaggtc
agtgtcgaagttttggtagagtatcctttttttgtatttggacagggctggtcatcctgc
tgtcctgagcggaccagccagctctttgatctgccgtgttccaaactctccgttggggac
gtctgcatctcgctcaccctcaagaacctgaagaatggctctgttaaaaagggccagcct
gtggaccctgccagcgtcctgctgaagcacacgaagaccgacagcctggctggcagcaga
cacagatacgccgagcaggagaacggaatcaaccagggaagcgcccaggtgctctctgag
aacggcgaactgaagtttccagaaagagtaggattgcccgcagcacccttcctcagcaaa
atagaaccgagcaagcccacggccacgaggaagaggaggtggtcagcgccagagacccgc
aaactggagaagtcggaggacgagccgcctttgactcttccgaagccttcgctcattcct
caggaggttaagatctgcatcgaaggccgatctaacgtgggcaagtag
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