Apodemus sylvaticus (European woodmouse): 127665892
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Entry
127665892 CDS
T10613
Symbol
Top3b
Name
(RefSeq) DNA topoisomerase 3-beta-1 isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl03440
Homologous recombination
asyl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127665892 (Top3b)
03460 Fanconi anemia pathway
127665892 (Top3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asyl03032
]
127665892 (Top3b)
03400 DNA repair and recombination proteins [BR:
asyl03400
]
127665892 (Top3b)
Enzymes [BR:
asyl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
127665892 (Top3b)
DNA replication proteins [BR:
asyl03032
]
Eukaryotic type
DNA Topoisomerases
127665892 (Top3b)
DNA repair and recombination proteins [BR:
asyl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
127665892 (Top3b)
FA (Fanconi anemia) pathway
127665892 (Top3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
127665892
NCBI-ProteinID:
XP_052014464
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Position
15:complement(84472760..84494825)
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AA seq
862 aa
AA seq
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MKTVLMVAEKPSLAQSIAKILSRGNMSSHKGLNGACSVHKYTGTFAGQPVHFKMTSVCGH
VMTLDFLGKYNKWDKVDPAELFSQAPTEKKEANPKLNMVKFLQVEGRGCDYVVLWLDCDK
EGENICFEVLDAVLPVMNNAHNGEKTVFRARFSSITDTDICNAMTRLSEPDHNEALSVDA
RQELDLRIGCAFTRFQTKYFQGKYGDLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETY
WVLQAQVHTDKEESLLLDWDRVRVFDREIAQMFLNMTKLEKEAWVESTSRKEKAKQRPLA
LNTVEMLRVASSALGMGPQHAMQIAERLYTQGYISYPRTETTHYPENFDLKGSLRQQANH
PYWADSVKQLLAEGINRPRKGHDAGDHPPITPMKSATEAELGGDAWRLYEYITRHFIATV
SHDCKYLQSTISFRIGPEHFTCVGKTVISPGFTEIMPWQSVPLEESLPTCQKGDAFTVGE
VRLLEKQTNPPDYLTEAELITLMEKHGIGTDASIPVHINNICQRNYVTVESGRRLKPTNL
GIVLVHGYYKIDAELVLPTIRSAVEKQLNLIAQGKADYHQVLGHTLDIFKRKFHYFVDSI
AGMDELMEVSFSPLAATGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDETYTLPQNGTIKL
YKELRCPLDDFELVLWSSGSRGKSYPLCPYCYNHPPFRDMKKGMGCNECTHPTCQHSLSM
LGIGQCVECENGVLVLDPTSGPKWKVACNTCNVVAHCFENAHRVRVSADTCNTCEAALLD
VDFNKAKSPLPGNETQHTGCVFCDPVFQELVELKHAASCHPMHRGGPGRRQGRGRARGRR
PPGKPNPRRPKDKMSALAAYFV
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccgtgctcatggtagcagaaaagccctccctggcacagtccattgccaaaatc
ctctcccgaggaaacatgtcctcacacaaagggctgaatggggcatgctcagtgcacaag
tacacaggaacctttgctggtcaacctgtccacttcaagatgacatctgtctgcggtcat
gtgatgacactggattttctaggaaagtacaacaagtgggataaggtggatcctgcagag
ctcttcagccaagctccaacagagaaaaaggaagctaaccccaagctgaacatggtcaag
ttcctgcaggtggagggcagaggctgtgactatgtcgtgctgtggctggactgtgacaaa
gaaggcgagaatatttgctttgaggtccttgatgccgttctgcctgtcatgaataatgcc
cataatggtgaaaagacagtgttccgggccaggttcagttccatcactgacacagacatc
tgtaatgccatgacccgtctgagtgagccagaccacaatgaggcactctccgtggatgcc
cgccaggagctagacctgcgcatcggctgtgcgttcaccaggtttcaaacaaagtatttc
caaggaaaatacggcgatttagacagctctctcatctcctttgggccatgtcagactcct
accctgggattctgtgtagaaagacatgataaaatccagtccttcaaaccagagacctac
tgggtactgcaggcccaggttcacactgataaagaggagtcgctccttctggactgggac
cgtgttagagtttttgaccgcgagattgcgcagatgtttttaaacatgacaaagctagaa
aaagaagcttgggtggagtctacaagcagaaaagaaaaagccaagcagagaccacttgct
ctgaacactgtggagatgttgcgtgtggccagctcagctctgggtatgggaccacagcac
gccatgcaaatagctgagagattatacacacagggctacatcagctacccacggacagaa
accacccactatcccgagaactttgacctgaagggctctttgcgacaacaggccaatcac
ccgtactgggcagactcggtaaagcagttgctagcagaaggcatcaaccgccctcggaaa
ggtcacgacgctggggaccatcctccgatcacacctatgaaatcagctacagaggctgaa
ttaggaggtgacgcatggagactctatgagtacatcaccagacacttcattgccacagtg
agccatgactgcaagtatctccagagcactatctccttcaggattgggcctgaacacttt
acatgtgtgggaaagacagttatttccccaggcttcacagagatcatgccttggcagagc
gtgcccctggaagaaagcctgcccacatgccagaagggtgacgccttcactgtgggtgaa
gtgagactgctggagaagcagacgaacccaccggactatctgacggaggctgagctcatc
acgctcatggagaagcacggtatcgggactgatgccagtatccctgtgcacatcaacaac
atctgccagcgcaactatgtcactgtggagagcggccgccggctcaagcccaccaacctt
ggcatagttctggtgcatggttactacaagattgatgcagagctggtactccccaccatc
cgaagcgcagtggaaaagcagttgaaccttattgcccagggcaaagctgactaccaccag
gtcctgggccacaccctggatatcttcaagagaaagttccactacttcgttgattctatt
gctggcatggatgagttgatggaggtgtccttttcacccctggctgccactggcaagccc
ctctcacgctgtgggaagtgccatcgatttatgaagtacatccaggccaagccaagccgc
ctgcactgctcccactgtgatgagacctacaccctcccccagaatggcaccatcaagctc
tacaaggagctgcggtgcccactggatgactttgaactggtcctgtggtcttcaggctcc
cggggcaagagctacccgctctgtccctactgctataaccacccacccttccgagacatg
aagaaaggcatgggctgcaatgagtgcacacaccccacctgccagcactcactgagcatg
ctgggcattggccagtgcgtggaatgcgagaatggagtcctggttctggaccctacctcc
ggtcccaagtggaaggtggcctgtaacacatgcaatgtggtggcacactgctttgaaaat
gcccaccgcgtacgggtatctgctgacacctgcaacacctgcgaggctgccctgctcgac
gtagacttcaacaaggccaagtctccccttcctggcaacgagacacaacacacaggctgc
gtcttctgtgacccggtgttccaggagctggtggagctgaagcatgcagcctcctgccac
cccatgcaccgcgggggtcctgggaggaggcagggtcgtgggcgggcccggggccggaga
cctccaggaaagcccaaccctaggcggccaaaagacaagatgtcagccctggctgcttac
ttcgtatga
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