Apodemus sylvaticus (European woodmouse): 127666937
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Entry
127666937 CDS
T10613
Symbol
Nipbl
Name
(RefSeq) nipped-B-like protein isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
127666937 (Nipbl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
asyl03036
]
127666937 (Nipbl)
Chromosome and associated proteins [BR:
asyl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
127666937 (Nipbl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT
Cnd1
Cnd3
DNA_repr_REX1B
Motif
Other DBs
NCBI-GeneID:
127666937
NCBI-ProteinID:
XP_052015904
LinkDB
All DBs
Position
16:35001503..35165815
Genome browser
AA seq
2798 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNSRIAEEVNCLLACRDDN
LVSQLVHSLNQVSTDHIELKDNLGSDDPEGDIPVLLQAVLARSPNVFREKSMQNRYVQSG
MMMSQYKLSQNSMHSSPASSNYQQTTISHSPSSRFVPPQTSSGNRFMPQQNSPVPSPYAP
QSPAGYMPYSHPSSYTTHPQMQQASVSSPIVAGGLRNLHDNKVSGPLSGNSANHHADNPR
HGSSDDYLHMVHRLSSDDGDSSTMRNAASFPLRSPQPVCSPAGSDGTPKGSRPPLILQSQ
SLPCSSPRDVPPDILLDSPERKQKKQKKMKLGKDEKDQNEKAAMYDIISSPTKDSTKLTL
RLSRVRSSDMDQQEDMLSGMENSNVSENDIPFNVQYPGQTSKTPVTPQDVNRPLNAAQCL
SQQEQAAFLPANQVPVLQQNTSVATKQPQTSVVQNQQQVSQQGPIYDEVELDALAEIERI
ERESAIERERFSKEVQDKDKPLKKRKQDSYPQEAGGATGGNRPASQETGSTGNGSRPALM
VSIDLHQAGRVDSQASITQDSDSIKKPEETKHCNDAPISVLQEDIVGNLKSIPENHPETP
KKKSDPELSKSGMKQNESRLSESKPNENQLGESKSNESKLETKTETPTEEPKQNENKTTE
SKQSESAVVEPKQNENRPCDTKPNDNKQNNTRSENTKARPETPKQKAESRPETPKQKSEG
RPETPKQKGDGRPETPKQKSEGRPETPKQKGEGRPETPKHRHENRRDSGKPSTEKKPDVS
KHKQDIKSDSPRLKSERAEALKQRPDGRSESLRRDHDNKQKSDDRGESERHRGDQSRVRR
PETLRSSSRNEHSTKSDGSKTEKLERKHRHESGDSRDRPSGEQKSRPDSPRVKQGDTNKS
RPGFKSPNSKDDKRTEGNRSKVDSNKAHTDNKAEFPSYLLGGRSGALKNFVIPKIKRDKD
GNITQETKKMDMKGEQKDKVEKMGLVEDLNKGAKPVVVLQKLSLDDVQKLIKDREEKSRS
SLKSIKNKPSKSNKGSIDQSVLKELPPELLAEIESTMPLCERVKMNKRKRSTVNEKPKYA
EISSDEDNDSDEAFESSRKRHKKDDDKAWEYEERDRRSSGDHRRSGHSHDGRRSSGGGRY
RNRSPSDSDMEDYSPPPSLSEVARKMKKKEKQKKRKAYEPKLTPEEMMDSSTFKRFTASI
ENILDNLEDMDFTAFGDDDEIPQELLLGKHQLNELGSESAKIKAMGIMDKLSTDKTVKVL
NILEKNIQDGSKLSTLLNHNNDTEEEERLWRDLIMERVTKSADACLTTINIMTSPNMPKA
VYIEDVIERVIQYTKFHLQNTLYPQYDPVYRLDPHGGGLLSSKAKRAKCSTHKQRVIVML
YNKVCDIVSSLSELLEIQLLTDTTILQVSSMGITPFFVENVSELQLCAIKLVTAVFSRYE
KHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDVDGEPMYIQMVTALVLQLIQCVVHLPS
SEKDPNSEEDSNKKVDQDVVITNSYETAMRTAQNFLSIFLKKCGSKQGEEDYRPLFENFV
QDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKSTEMALRVASLDYLGTVAARLRKDAVT
SKMDQGSIERILKQVSGGEDEIQQLQKALLDYLDENTETDPSLVFSRKFYIAQWFRDTTL
ETEKAMKSQKDEESSDATHHAKEIETTGQIMHRAENRKKFLRSIIKTTPSQFSTLKMNSD
TVDYDDACLIVRYLASMRPFAQSFDIYLTQILRVLGENAIAVRTKAMKCLSEVVAVDPSI
LARLDMQRGVHGRLMDNSTSVREAAVELLGRFVLCRPQLAEQYYDMLIERILDTGISVRK
RVIKILRDICIEQPTFPKITEMCVKMIRRVNDEEGIKKLVNETFQKLWFTPTPHNDKEAM
TRKILNITDVVAACRDTGYDWFEQLLQNLLKSEEDSSYKPVKKACTQLVDNLVEHILKYE
ESLADSDNKGVNSGRLVACITTLFLFSKIRPQLMVKHAMTMQPYLTTKCSTQNDFMVICN
VAKILELVVPLMEHPSETFLATIEEDLMKLIIKYGMTVVQHCVSCLGAVVNKVTQNFKFV
WACFNRYYGAISKLKSQHQEDPNNTSLLTNKPALLRSLFTVGALCRHFDFDLEDFKGNSK
VNIKDKVLELLMYFTKHSDEEVQTKAIIGLGFAFIQHPSLMFEQEVKNLYNSILSDKNSS
VNLKIQVLKNLQTYLQEEDTRMQQADRDWKKVAKQEDLKEMGDVSSGMSSSIMQLYLKQV
LEAFFHTQSSVRHFALNVIALTLNQGLIHPVQCVPYLIAMGTDPEPAMRNKADQQLVEID
KKYAGFIHMKAVAGMKMSYQVQQAINTCLKDPVRGFRQDESSSALCSHLYSMIRGNRQHR
RAFLISLLNLFDDTAKTEVTMLLYIADNLACFPYQTQEEPLFIMHHIDITLSVSGSNLLQ
SFKESMVKDKRKERKTSPAKENESSESEEEVSRPRKSRKRVDSESDSDSEDDINSVMKCL
PENSAPLIEFANVSQGILLLLMLKQHLKNLCGFSDSKIQKYSPSESAKVYDKAINRKTGV
HFHPKQTLDFLRSDMANSKLTEDVKRSIVRQYLDFKLLMEHLDPDEEEEEGEVSASTNAR
NKAITSLLGGGSPKNNTAADTEDEESDGEDRGGGTSGSLRRSKRNSDSTELAAQMNESVD
VMDVIAICCPKYKDRPQIARVVQRTSSGVSVQWMAGSYSGSWTEAKRRDGRKLVPWVDTI
KESDIIYKKIALTSANKLTNKVVQTLRSLYAAKDGTSS
NT seq
8397 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgccccatgtccccataactactcttgcggggattgctagtcttacg
gacctcctgaaccagctgcctcttccgtctcctttacctgctacaactacaaagagcctc
ctctttaattcacgaatagcagaagaggtgaactgccttttggcctgtagggatgacaat
ttggtttcacagcttgtccatagtctcaaccaggtatcaacagatcacatagaactgaaa
gataaccttggcagtgatgatcccgaaggcgatataccagtcttgttgcaggccgtcctg
gcaaggagtcctaacgttttcagggagaaaagcatgcagaacagatatgtacagagtgga
atgatgatgtctcagtataaactttctcagaattccatgcacagtagtcctgcatcttcc
aattaccaacaaaccactatctcacatagcccctccagccggtttgtgccaccacagaca
agctctgggaacagatttatgccacaacaaaatagcccagtgcctagtccatatgcccca
cagagtcctgcaggatacatgccatattcccatccttcaagttacacaacacatccacag
atgcagcaagcatcagtatcaagtcctattgttgccggtggcttgagaaacctccatgat
aacaaagtttctggtccattatctggcaactcagctaatcatcatgctgataaccctaga
catggctcaagcgacgactacctacacatggtgcacaggctaagtagtgacgatggcgat
tcttcaacaatgaggaatgctgcatcttttcccttaaggtctccacagccagtgtgttct
cctgctggaagtgacggaactcctaaaggatcaagaccacctttaattctacagtctcag
tctttaccttgttcatcacctcgagatgttcctccagatatcttgctagattctccagaa
agaaaacaaaaaaagcaaaagaaaatgaaattaggcaaggatgagaaagaccagaacgag
aaagctgcaatgtatgatataattagctctccaaccaaggactccactaaacttacatta
agactttctcgagtaagatcttcagatatggaccagcaagaggatatgctatctggtatg
gaaaatagcaatgtttcagaaaatgatattccttttaatgtgcagtatccaggacagact
tcaaaaacacccgttactccacaggacgtaaaccgcccccttaatgctgctcagtgtttg
tcgcagcaagaacaagcagcattccttccagcaaatcaagtgcctgttttacaacagaac
acttcagttgctaccaaacaaccacagacttctgtagtacagaatcagcaacaggtatca
caacaggggccgatatatgacgaagtcgaattggacgcattggcagaaattgaacggata
gagagagaatcagccattgaaagggagcgcttctcaaaggaagttcaagataaagataag
cctttgaaaaaaagaaaacaagattcttacccacaggaggctgggggtgctacaggaggt
aatagaccagcttctcaggagacgggttctacgggaaatgggtcaaggccagcattaatg
gttagcattgatcttcatcaggcaggaagagtggactctcaggcttctataactcaggat
tcagactccataaaaaagcctgaagaaaccaaacattgtaatgatgcacccatttctgtt
cttcaggaagatattgttggaaatcttaagtctataccagaaaaccatcctgagactcct
aaaaaaaagtctgatcctgagctttcaaaaagcggaatgaaacaaaacgaaagtaggttg
tcagaatctaaaccaaatgaaaatcagctgggggagtcaaaatcaaatgaaagtaagtta
gaaactaaaactgagaccccaacagaagaacctaagcaaaacgagaacaaaacgacagag
tccaaacagagcgagagcgctgtagttgagcctaaacaaaatgaaaatagaccgtgtgac
acaaaaccaaatgacaacaaacagaacaacaccaggtcagaaaacacaaaagcaagacct
gaaaccccaaagcagaaagctgaaagccggcctgaaaccccaaagcaaaagagtgagggc
cggcctgaaaccccaaaacagaagggtgatggacgacctgagactccaaagcaaaagagt
gaaggtcgccctgaaactccaaagcagaaaggtgaaggccggcctgaaaccccaaaacat
aggcatgaaaataggagggattctggaaagccatcaacagagaagaaacctgatgtgtct
aagcataaacaggatatcaaatctgactcacctcgcttaaaatcagaaagagctgaagcc
ttaaaacagagacccgatgggcgatcagagtcactaagacgtgaccatgataataaacaa
aaatcagatgacaggggtgagtcagaacgacatcggggtgatcagtcaagggttcgacga
ccagaaacattgagatcttctagtagaaatgaacatagcactaaatcagatggttcaaaa
actgaaaaactagaaagaaaacacaggcatgaatcaggggactcacgggacagaccttct
ggggaacaaaaatcaagaccagacagtcctcgtgtaaaacaaggagatactaataaatca
agacctggttttaagtcaccaaatagtaaagatgacaaaaggacagagggtaacagaagt
aaagtagacagtaataaagcgcacactgataataaggccgaatttccaagctatttgttg
gggggtaggtctggtgcattgaaaaatttcgtcattccaaaaatcaagagggataaagat
ggcaacataactcaggaaactaagaaaatggacatgaaaggagagcagaaagacaaagta
gaaaaaatgggattagttgaagatctaaacaaaggagctaagcctgtagttgttctgcaa
aaactatcgctggatgatgtccagaagctaattaaagatagagaggagaaatcaagaagt
tcccttaagtctatcaagaataagccatcaaagtcaaataaaggtagtatagatcaatca
gtgttaaaagaattgccccctgaactcctggcagaaattgaatctaccatgccactttgt
gaacgtgtgaaaatgaacaaacgcaagcgtagcacagttaatgaaaagccaaaatatgct
gaaatcagttcagatgaagataatgatagtgacgaagcttttgaatcctctaggaaacgg
cataaaaaagatgacgataaagcttgggaatacgaagagcgcgacagaagaagctctggg
gaccataggcggagtggccactcccatgatggaaggaggagttcgggtggtggtcgttac
cgaaaccgaagtccgtcagattctgatatggaagattactctcctcctcccagccttagt
gaggttgctagaaaaatgaagaaaaaagaaaaacaaaagaaaaggaaagcttatgagccc
aaactaacccctgaagaaatgatggattcttcaacttttaagagatttacagcctcaata
gagaatattttggataatttagaagatatggattttactgcatttggtgatgatgatgaa
attcctcaggaactgcttttaggaaaacatcagcttaatgaacttgggagtgaatctgct
aaaattaaagccatgggtataatggacaagctttcaactgacaaaactgtgaaagtccta
aatatattggagaagaatattcaggatggatcaaagctttccactttgttaaatcataat
aatgatactgaagaagaagaaagattgtggagagacctaattatggaaagagttacaaag
tcagcagatgcctgtcttacaactatcaacattatgacatctcctaacatgccaaaagct
gtatacattgaagatgtaattgaaagagttatacagtacactaaatttcatttacaaaac
acactctatccccagtatgaccctgtttacagattagatccacatggaggagggttatta
agttcaaaggccaaacgggctaaatgttctactcataagcagagagtaatagtgatgctt
tataacaaagtctgtgacattgttagcagtttatcagaattgctagagatacagcttctt
acagacacaacaattcttcaggtttcatcaatgggaatcacaccattttttgtggaaaat
gtcagtgaactacaattgtgtgccattaagttagtcactgcagtattttcaagatatgaa
aagcataggcagttaatattggaagaaatttttacttcacttgcaagactgccaactagc
aagagaagtctaaggaatttcaggttaaatagtagtgatgtggacggagagcctatgtat
attcagatggtcacggcactagttttacaacttattcaatgtgtagttcacttaccatca
tcagagaaggatcctaattcagaagaagactcaaacaaaaaagttgatcaggatgttgtc
attactaactcttatgaaacagctatgagaacagcccaaaactttctttccatcttcctt
aaaaaatgtggtagtaaacaaggtgaagaagattacagaccactttttgaaaattttgtt
caagaccttctttcaacagtcaataagcctgaatggccagctgctgaactactccttagt
ttgttagggagactgttggttcatcagttcagtaataagtcaacagaaatggctttaaga
gtggcatctcttgattaccttgggactgttgctgcacggctgagaaaagatgctgtcacc
agcaagatggatcaagggtctatagaacggattttaaaacaggtttccggaggagaagat
gagatccaacaattgcaaaaggcattacttgattatttggatgaaaacactgagactgac
ccttcgctagtgttttctcgtaaattctatatagcccagtggttccgtgacacaactctg
gaaacagaaaaagcaatgaaatcacaaaaagatgaagaatcatctgatgcgacacatcat
gcaaaagaaatcgaaacaactggtcaaataatgcatcgagctgagaaccggaaaaaattt
cttcgaagcattatcaaaaccacaccttctcagttcagcacattaaagatgaactctgat
actgtggactatgatgatgcgtgcttgattgttcgatatttggcctctatgaggccgttt
gcccagagctttgatatttatttgacacagatactacgagttcttggtgaaaatgcaatt
gccgttcgaacaaaagccatgaagtgtttgtctgaggttgttgctgtagaccccagtatt
ctagcaaggcttgacatgcagcgaggagttcatggccggctgatggataattccactagt
gtgcgagaggcagctgtggagttgctgggtcgatttgtcctctgcaggcctcagctcgct
gagcaatactatgacatgctgattgaaagaatattggatactggtatcagtgtcaggaaa
agagtaataaagattttaagagacatctgtattgaacaaccaacatttccaaaaattaca
gaaatgtgtgtaaaaatgattcgtagagtcaacgatgaagagggcattaagaaattagta
aatgaaacattccaaaagctttggtttactccaactccacataatgacaaagaagcaatg
acaaggaaaattttaaacatcactgatgtggttgcagcatgcagagatactggctatgac
tggtttgagcaactccttcaaaatttgttgaagtctgaagaggattcctcatataaacct
gtgaagaaagcttgtactcaacttgtcgataacctagttgaacatattcttaaatatgag
gaatctctagctgactcagacaataaaggtgtaaattctggaagattggtagcttgtata
accactttgttcttattcagcaaaataagaccccagctcatggtcaaacacgccatgacc
atgcagccgtacctcaccactaaatgcagtacgcaaaatgacttcatggttatctgcaat
gtggcaaaaatccttgagttagttgtgccactgatggagcaccccagtgagacttttctg
gccacgattgaggaggacctgatgaagctaatcatcaaatacggcatgactgtagtacag
cattgtgtgagctgtcttggggctgttgtaaataaagtgacccagaattttaaatttgtg
tgggcctgtttcaatagatactacggtgccatttcaaaattaaaaagtcagcaccaagaa
gacccaaataacacttcacttttaacaaataaaccagcgcttcttaggtccctcttcact
gttggagcactttgccggcattttgattttgacctggaagattttaaaggcaacagtaag
gttaacataaaggataaagtgcttgaactattgatgtattttacaaagcactcagatgaa
gaagtacaaacaaaagccatcattggtctaggatttgcctttatacagcatccgagtcta
atgtttgagcaagaagtgaagaatctgtataatagtattttatctgataagaactcctca
gtgaatttaaaaatacaagtgttaaaaaacctgcagacttacctacaggaagaggataca
cggatgcagcaagcagacagagactggaagaaagttgcaaagcaggaagacttgaaagaa
atgggagacgtgtcctctggcatgagcagctccatcatgcagctctacctgaagcaggtg
ctggaggccttcttccacacccagtcaagtgtgcgccacttcgccctcaatgtcatcgct
ctgactctgaaccaaggtctcatccatccggtccagtgtgtcccatacttaattgccatg
ggcacagatccggaacctgctatgcgaaacaaggctgatcagcagcttgtggaaatagac
aaaaagtatgctggattcatccatatgaaagccgtggctggtatgaagatgtcttaccag
gtacaacaggcgatcaacacgtgcctaaaagatcctgtaaggggtttccgacaagacgag
tcctccagtgctttgtgctcacacctctactccatgatccgtgggaaccgccaacacaga
cgcgcctttcttatttctttactcaacctctttgatgacacagcaaaaacagaagtgact
atgctcttgtacatagcagacaatctagcctgttttccataccagactcaggaagagccg
ctgtttataatgcaccacatagacattacgctctctgtttccggtagtaacctattgcag
tcattcaaggagtctatggtaaaagacaaaaggaaagagagaaaaacatcccctgcaaaa
gagaacgagtccagtgagagtgaagaagaagtgtccagacctcggaagtctcgaaagcgg
gtagattcggagtcagactcagactcagaagatgatataaattcagtgatgaagtgtttg
ccggaaaattcagcccctttgattgaatttgcaaatgtttcccagggtattttattactt
cttatgttaaagcagcacctgaagaatctctgtggattttctgatagtaaaatccaaaaa
tattctccatctgaatctgcaaaagtgtatgataaagccattaatcggaaaacgggggtt
cattttcatcccaaacaaacactggacttcctgcgaagtgacatggctaattccaaactg
acggaggacgtgaagaggagcatagtaaggcagtacctagactttaaacttctcatggaa
catctagaccctgatgaagaagaagaggaaggagaggtgtcagctagcacaaatgctcgg
aacaaagcaattacctcgctgcttggaggaggcagccctaaaaataacacagcagcagac
acagaagatgaggagagtgatggggaggatagaggaggaggcacttcagggtcattgaga
aggtcaaaacgaaattcagactctacggagttggcagcacagatgaatgaaagtgttgac
gtcatggatgtcatcgctatttgctgtccaaagtacaaagaccgaccacagattgcaaga
gtagtgcagagaaccagcagtggcgtcagtgtccagtggatggcaggctcctacagcggc
tcctggacggaggccaagcgccgcgatggccgcaaactggtgccttgggtagacactatt
aaagagtcagacattatttacaaaaaaattgctctaacgagtgctaataagctgactaat
aaagttgttcagactttacgatccctgtatgccgccaaggatgggacttccagctaa
DBGET
integrated database retrieval system
