Apodemus sylvaticus (European woodmouse): 127667004
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Entry
127667004 CDS
T10613
Symbol
Erbin
Name
(RefSeq) erbin isoform X1
KO
K12796
erbb2-interacting protein
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
127667004 (Erbin)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_14
LRR_8
LRR_4
PDZ
LRR_LRWD1
PDZ_6
LRR_NXF1-5
LRR_5
PDZ_2
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
127667004
NCBI-ProteinID:
XP_052015976
LinkDB
All DBs
Position
16:56907278..57005010
Genome browser
AA seq
1449 aa
AA seq
DB search
MTTKRSLFVRLVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEE
LPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIV
EASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTM
NRLTQLERLDLGSNEFTEVPEVLEQLSGLREFWMDGNRLTFIPGFIGSLRQLTYLDVSKN
NIEMVEEGISTCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLRS
IEELDCSFNEIEALPSSIGQLTNMRTFAADHNYLQQLPPEIGNWKNITVLFLHSNKLETL
PEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIPLQKETDSETQET
VLTNYMFPQQPRTEDVMFISDNESFNPALWEEQRKQRAQVAFECDEDKDEREAPPREGNL
KRYPTPYPDELKNMVKTVQTIVHRLKDEETNEESGRDLKQHEDQQVVNKDNGVKTSESTT
TKSKLDEREKYMNSVQKMSEPEAEANAGNSPGTANMKSSGNLKHIVNHDDVFEESEELSS
DEEMKMAEMRPPLIETSINQPKVVALSSNKKDDAKDTDSLSDEVTHNSNQNNSNCSSPSR
MSDSVSLNTDSSQDTSLCSPVKQTPVDSNSKVRQEDENFNSLIQNGINLNNSPEEKFKIN
DKKDFKLPEYDLNIEEQLVLIEKDVDSKATSDDSHQLDHINMNLNKLVTNNIFQPEIMER
SKMQDIVLGTGFLSIHPKNEAEHIENGNKFPNLEPINKVNGLSEDTPHFPGRIEPQNISS
SDMGISKSTEDLSPQRSGPTGSVVKSHSITNMETGGLKIYDILGDDGPQPPSPAVKMAST
VDGKNIVRSKSATLLYDQPLQVFTASSSSSELLSGTKAVFKFDSNHNPEEPDIVRAPTVP
GPQSTPQPYGPPQYNVQYSGSATVKDTLWHPKQNPQIDPVSFPPQRLPRSESAENHSYAK
HSANMNFSNHNNVRANTAYHLHQRLTPARHGEMWAISPNDRLGPAVTRTTIQRQSSVSST
ASVNLGDPTRRAEGDYLSYRELHSMGRTPVMSGSQRPLSARAYSIDGPNTSRPQSARPSI
NEIPERTMSVSDFNYSRTSPSKRPNARVGSEHSLLDPPGKSKVPHDWREQVLRHIEAKKL
EKSMLSRSFNSNLTAVSSSHYGSSRDLHGSQGSLALSVADGRGSGGHIFRHPQTSSPGDC
CQDDRFMSGEQTLPSGALSHRDLPDSLMKMPLSNGQMGQPLRPQANYSQTHHPPQASVAR
HPSREQLIDYLMLKVAHQPPHTHPHCSPRQGHELARQEIRVRVEKDPELGFSISGGVGGR
GNPFRPDDDGIFVTRVQPEGPASKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFHNAVE
LIIVREVSS
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atgactacaaaacgaagtttgtttgtgcggttggtaccatgtcgctgcctacgaggggaa
gaggagacagtcactactctagattattctcattgtagcttggaacaagttcccaaagag
attttcacctttgaaaaaactttagaggagctttatttagatgctaatcagattgaagag
cttccaaagcaactttttaattgtcagtctctacataaactaagtttgccagacaatgat
ttaacaacattgccagcctccattgcaaatcttattaacctcagggaactggatgtcagc
aaaaatggaatacaagaatttccagaaaatattaaaaattgtaaagttttgacaattgtg
gaggccagtgtaaaccctatttctaagctccctgatgggttttctcagctgctaaaccta
acccagttatatctgaatgatgctttccttgaattcttaccagctaattttggcagattg
actaaactccagatactagaacttagagaaaaccagttgaaaatgttgcctaaaaccatg
aatagactgacccagctggaaagactggatttgggaagtaatgaattcacagaagtgcct
gaagtacttgaacaactaagtggactgagagaattttggatggatggcaatagactgact
tttattccagggtttattggtagtttgagacagctcacatacttggatgtttctaaaaat
aatattgaaatggttgaagaaggaatttcaacatgtgaaaacctccaggactttctctta
tcaagtaattcccttcagcaactgcctgagactattggttctttgaaaaatgtcacaact
cttaaaatagatgaaaaccaattaatgtatctaccagactcaataggagggttgaggtca
atagaagaactggattgcagtttcaatgaaatcgaagctttgccttcatcaattggacag
ctcacgaacatgagaacatttgctgcagatcacaattacttacagcagttacccccagag
attggaaactggaaaaatataactgtgctgtttctccattctaataaactagagacactt
ccagaggaaatgggtgatatgcaaaaattaaaagtcatcaatttaagtgataataggtta
aagaatttgccttttagctttacaaagctacaacagttgactgctatgtggctgtcagat
aatcagtccaaacctctgatacctcttcaaaaagaaactgattcagagactcaggaaacg
gtgcttactaattacatgttccctcagcagccaaggactgaagatgttatgttcatatca
gataatgaaagttttaatcctgcattgtgggaagaacagagaaaacagcgtgctcaagtg
gcatttgaatgtgatgaagacaaagatgaaagagaggcacctcccagggagggaaactta
aagagatatccaacaccatacccagatgagcttaagaatatggtcaagactgttcaaacc
attgtacatagattaaaagatgaagagactaatgaagagtcggggagagatttgaaacaa
catgaagatcagcaagttgtaaataaggataatggtgtgaagacttcagaaagtactaca
acaaaaagcaaacttgatgaaagagaaaagtatatgaattctgtacagaaaatgagtgag
ccagaagctgaggccaatgctggaaattcaccagggactgcaaatatgaaatcgtctggg
aacctgaagcacattgttaaccatgatgatgtttttgaggaatctgaagaactttcttct
gatgaagaaatgaaaatggcagagatgcgacctccattaattgaaacctccattaatcag
cctaaagttgtagcacttagtagtaataaaaaggatgatgcaaaggatacagattcttta
tcagatgaagtcacacacaacagtaatcagaataacagcaactgttcttctccatctcgg
atgtctgattcagtgtctcttaatactgacagcagtcaagacacctcgctgtgttctcca
gtgaaacagactcctgttgatagtaactccaaagtcaggcaagaagatgaaaattttaac
agccttatacaaaatggaattaatttaaacaattcaccagaagaaaaattcaaaattaat
gataaaaaggattttaagttacctgagtatgatttgaatattgaagaacagttagttctg
attgaaaaagatgttgattcaaaagccacatctgatgactctcaccagttagaccatatc
aacatgaatcttaataaacttgtgaccaataatatttttcaaccagaaataatggaaaga
tcaaagatgcaggatatagtgcttggaacaggctttttaagtattcatcctaaaaatgag
gctgagcacatagaaaatggaaataagtttccaaatttggagcccataaataaggtaaac
ggtctttctgaggacactccacactttcctggtaggattgaaccacagaatatcagttct
tctgacatgggtatttctaaaagcacagaagatctatctcctcagagaagtggtccaact
ggatctgttgtgaaatctcatagtataactaacatggagactggaggcttaaaaatctat
gacattcttggtgatgatggcccccagccaccgagtccagcagttaaaatggcttctact
gtggatgggaaaaacatagtcagaagcaagtctgccacactgctgtatgatcagcccctg
caggtgttcactgcttcttcctcatcctctgagttactgtcaggtacaaaggcagttttc
aagtttgattcaaatcataaccctgaagagccagatatagtaagagcccccacagtacct
ggcccacagtctacacctcaaccgtatggtcctccacagtataatgtccagtacagtggc
agtgctacagtaaaagacactttgtggcaccctaaacagaatccacaaatagatcctgtc
agttttcctcctcagcgccttccaagatctgagagtgcagaaaatcacagttatgcaaag
cattctgccaatatgaatttctctaaccataacaatgttagagccaatactgcataccac
ttacatcagagacttaccccagccagacatggagaaatgtgggctatttcccctaatgac
cggctagggccagcggtaactcggactactattcagagacagagtagtgtgtcttcaacg
gcttctgtaaatcttggtgatcccacaaggcgtgctgaaggagattatttatcgtacaga
gagttacattcaatgggaagaactccagtcatgtcaggatcacagagacctctttctgca
cgagcatacagcattgatggcccaaatacatcaaggcctcagagtgcccggccctctatt
aatgaaataccagagagaactatgtcggttagtgatttcaattactcacggactagtcct
tcaaaaagaccaaatgcaagggttggttccgaacattctttgttagatcctcctggaaaa
agtaaagttcctcatgactggcgggaacaagtacttcgacacattgaggccaaaaaatta
gaaaagagtatgctgtcacggtcctttaattccaatcttactgctgtaagcagctctcac
tatggcagctctagggatctgcatggcagccagggcagcctggccctgagtgtggcagac
ggaagaggttctggtgggcacattttccgacatccccagacatccagtccaggagattgt
tgccaagatgatagattcatgtcaggagagcagaccctcccatcaggtgcacttagtcac
agagatcttccagacagcttgatgaaaatgcctttgagtaatggacaaatgggccagcct
ctcaggcctcaggcaaattatagtcaaacacatcatccccctcaggcttctgtggcaagg
catccctctagagaacaactaattgattatttgatgctgaaagtggcccaccagcctcca
catacacatccccattgttctcctagacaaggccatgaactggcaaggcaagagattcga
gtaagagtagaaaaggatccagaacttggatttagcatatcaggaggtgttgggggtaga
ggaaaccctttcagacctgatgatgacggtatatttgtaacaagggtacagcctgaagga
ccagcatcaaaattactacagccaggagataaaattattcaggctaatggctacagtttt
atcaacattgaacatgggcaagcagtgtccttgttaaaaactttccataatgcagtagaa
ctcatcattgtacgagaagtttcttcataa
DBGET
integrated database retrieval system
