Apodemus sylvaticus (European woodmouse): 127667236
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Entry
127667236 CDS
T10613
Symbol
Lima1
Name
(RefSeq) LIM domain and actin-binding protein 1
KO
K23026
LIM domain and actin-binding protein 1
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
127667236 (Lima1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
asyl04812
]
127667236 (Lima1)
Cytoskeleton proteins [BR:
asyl04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
127667236 (Lima1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
127667236
NCBI-ProteinID:
XP_052016128
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All DBs
Position
17:70204828..70303707
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AA seq
758 aa
AA seq
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MESTPFSRRQWTSLSLRVTAKELSLVNKNKSSAIVEIFSKYQKAAEESNMERKKTNTESL
PQHFRRGTLSVLKKKWENPVAGAEFHTDSLPNSSSEGGHTADHPSAGVTDKPAPGARADR
EEQTQPKPRFGSRPEAVIQCRYPRLEDSHDFKAQATESQKMENCLGDSRHEAEKPETSEN
TETSGKIEKYNVPLNRLKMMFEKGEHSQTKSVWTQSRNAGGRRLSENSCSLDDLEIGAGH
LSSSAFNAEKNESKRNPELPRLSETSIKDRMAKYQAAVSRQSSPASYTSELKASESRTHK
WEQKENVPPGPEACSIHQDASKVSVTENSLAAHSVPAEDDTCNSQVKGEAQQPVHPKPLS
PDARTASLPESSPSKTVKKFQVPAKESCVECQKTVYPMERLLANQQVFHISCFRCSYCNN
KLSLGTYASLHGRIYCKPHFNQLFKSKGNYDEGFGHRPHKDLWASKSESEETLGRPAQPP
NAGEAPHSPGVEDAPIAKVGVLAASMEAKATSQREREDKPAETKKLRIAWPPPAELGGSG
SALEEGLKVSKPKWPPEDEGCKAEAPEDVDLDLKKLRRSSSLKERSRPFTVAASFRTSSI
KSPKTSAPSLRKGWSESEQREEFGGGMASAERKQAEDASPSAERENVAKSRRQSEDGPQE
APGSKDRRSLQLERESFIENGDADPAEDDSHVPAQQSPLEPKSPGWAGFVDTTATKELTT
QNQKSQDVGFWEGEVVRELSVEEQIKRNRYYDEDEDEE
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgactccatttagtagacggcagtggacttccctgtcgctgagagtaacagcc
aaggaactttctcttgtcaacaagaacaagtcatccgccattgtggaaatattctccaag
taccagaaagcggctgaagaatcaaacatggaaagaaagaaaaccaacactgaaagtctc
ccccagcactttagaagagggaccctgtctgtgttaaagaagaagtgggagaacccggtg
gctggggcagaattccacacagactcactgccaaatagcagcagtgagggtgggcacaca
gcagaccacccttctgctggagtgacggacaagcctgctcctggagccagagctgaccgg
gaagagcaaacccagcccaaacctagattcggatctcgtccggaagctgttatccagtgt
cggtatccccgcttagaggacagccacgattttaaagcccaggccacagaaagccaaaaa
atggaaaactgtctgggagattccaggcatgaagcagagaagcctgaaacgagcgaaaac
acagaaacttcaggcaaaatagagaaatacaacgttccgctgaacagactaaagatgatg
tttgagaaaggtgaacacagccaaaccaagagcgtctggactcaaagccgaaatgcaggc
ggaaggagactctctgaaaacagttgttccctggacgatttggaaataggtgcaggtcat
ttgtcttcctctgcgttcaatgcggagaaaaacgagagtaagcggaatccggagcttcca
cgcctctccgaaacctccataaaggaccgcatggccaagtaccaggccgccgtgtccagg
cagagcagcccagccagctacacaagtgaactgaaagccagtgaaagcagaactcataaa
tgggagcagaaggaaaatgtacccccaggccccgaggcctgcagcatccatcaggacgcg
agcaaggtttctgtgacagagaacagcctggcggcccactccgtccctgctgaagatgac
acctgtaactcccaggtgaagggcgaggcccagcagcccgtgcaccctaagccgctgagt
cctgacgccaggactgccagtcttccggaaagttctccttccaaaacagtgaagaagttt
caggtgcctgcaaaggagagctgcgtggagtgtcagaagacggtgtaccccatggagcgg
ctcctggccaaccagcaggtgtttcacatcagctgtttccgatgttcctactgcaacaac
aaacttagtctaggaacatacgcatccttgcatggaagaatctattgcaagcctcacttc
aatcaactcttcaagtccaaaggcaactatgacgaaggctttgggcacaggccccataag
gatctgtgggcaagcaaaagtgaaagtgaggagactttggggcgaccagcccagcctcct
aacgcaggggaggccccccacagcccaggggtggaagatgcccccatcgctaaggtcggc
gtgctggccgccagcatggaagccaaggccacgtctcagagggagagggaggataagccg
gcggagaccaagaagctgaggattgcctggcctccgcccgccgagctgggcggttccgga
agtgccctggaggaagggctcaaggtgtcgaagcccaagtggcctccggaggatgagggc
tgcaaggcggaggctcccgaggacgtcgatctggacctgaagaagctgaggcgctcttcg
tcactgaaggagcggagccgcccgttcaccgtggcagcgtcctttcgaacctcgtccatc
aagagccccaagacctcggcgccgtctctcaggaagggttggagcgagtcggagcagaga
gaggagtttggaggagggatggcctcggcggaaaggaaacaagcggaagatgccagcccc
tctgcggagagagagaatgtggcaaagtcacgccggcagagcgaggacggcccgcaggaa
gcgccggggagcaaggacagacggtctttgcagctggagagggagagttttatcgagaac
ggcgacgcagaccccgctgaagatgacagccatgtccccgcacagcagtctccgttagag
cccaagtctccgggttgggctggctttgtagacaccacagctactaaagaactcactacc
cagaatcaaaaatcccaagatgtcgggttctgggagggggaagtggtccgagagctgtct
gtggaggaacagataaagagaaaccggtactatgacgaggatgaggatgaagaatga
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