Apodemus sylvaticus (European woodmouse): 127667374
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Entry
127667374 CDS
T10613
Symbol
Cntn1
Name
(RefSeq) contactin-1
KO
K06759
contactin 1
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04514
Cell adhesion molecules
Brite
Cell adhesion molecules [BR:
asyl04515
]
Immunoglobulin superfamily
Contactins
127667374 (Cntn1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
asyl00537
]
Others
127667374 (Cntn1)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
127667374
NCBI-ProteinID:
XP_052016324
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Position
17:60940980..61079123
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AA seq
1061 aa
AA seq
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MGFLSWLGPQVGPVMSWALLQVPNHHRSSMSCRKDKIVGLSFSSWVDVLITLLETCRVIE
HEFTWHRRYGHGVSEEDKGFGPIFEEQPINTIYPEESLEGKVSLNCRARASPFPVYKWRM
NNGDVDLTNDRYSMVGGNLVINNPDKQKDAGIYYCLASNNYGMVRSTEATLSFGYLDPFP
PEERPEVKVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIA
NVESSDRGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDIYTMMGQNV
TLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGLYECEAENIRGKD
KHQARIYVQAFPEWVEHINDTEVDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLY
DVTFENAGMYQCIAENAYGSIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPK
AAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTL
VITNPTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKEITHIHYQ
RNFMLDANGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRA
TSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIEGNMESAKAVDLIPWMEY
EFRVVATNTLGTGEPSIPSNRIRTDGAAPNVAPSDVGGGGGTNRELTITWAPLSREYHYG
NNFGYIVAFKPFDGEEWKKVTVTNPDTGRYVHKDETMTPSTAFQVKVKAFNNKGDGPYSL
IAVINSAQDAPSEAPTEVGVKVLSSSEISVHWKHVLEKIVESYQIRYWAGHDKESAAHRV
QVTSQEYSARLENLLPDTQYFIEVGACNSAGCGPSSDVIETFTRKAPPSQPPRIISSVRS
GSRYIITWDHVVALSNESTVTGYKILYRPDGQHDGKLFSTHKHSIEVPIPRDGEYVVEVR
AHSDGGDGVVSQVKISGVSTLSSSLLSLLLPSLGFLVYLEF
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcctctcctggcttgggccacaagttgggccagtcatgagttgggcacttcta
caagttccgaaccaccatcgctccagcatgtcctgtaggaaggacaagattgtaggtctg
agtttttctagctgggttgatgtcctaatcacactactggagacttgccgggttatagaa
catgagtttacatggcacagaagatatggtcatggagtttctgaggaggacaaaggattt
ggacccatttttgaagagcaaccaatcaataccatttacccagaagagtcactggaagga
aaagtctcactcaactgccgggcccgggccagcccattcccagtttacaaatggagaatg
aacaacggggatgtcgacctgacaaatgatcggtacagtatggtgggaggaaaccttgtc
atcaacaaccccgacaaacagaaggatgctgggatatactactgcttggcgtccaacaac
tatggaatggtcaggagcactgaggcaacgctgagcttcgggtatcttgacccctttcct
cctgaggagcgtccggaagtgaaggtgaaagaagggaagggcatggtgctgctctgcgac
cctccctaccacttcccagatgatcttagctaccgctggcttctgaatgaatttcctgtg
tttatcacaatggacaaacgaagatttgtgtctcagaccaatggcaatctgtacatcgca
aatgtggagtcctcagataggggcaactactcctgcttcgtgtccagtccttctattaca
aaaagtgtgttcagcaagtttatccccctcattccaatacctgaacgaacaacgaaacca
tatcctgctgatattgttgtgcagttcaaggacatatacaccatgatgggccaaaatgtg
actttagagtgtttcgctcttggaaaccctgttcctgatattcggtggcggaaggtgcta
gaaccaatgcctagcacggctgagataagcacctcaggggctgtcctcaagatcttcaac
atccagctagaagacgaaggcctctacgagtgtgaggctgagaacattaggggaaaggac
aagcaccaggcaagaatttatgttcaagcatttcctgaatgggtagagcatatcaacgac
actgaggtggacataggcagtgacctctactggccttgcgtggccacagggaaacccatt
cctaccatcaggtggctgaaaaatggctacgcgtatcacaaaggagaactgagactgtat
gatgtgacttttgaaaatgccggaatgtaccagtgcatagctgaaaatgcctatgggtcc
atttatgcaaatgcggagctcaagatcctagctttagctccaacttttgaaatgaatcct
atgaagaaaaagatcttggctgcgaaaggaggaagggttatcatcgaatgtaaacccaag
gctgcacccaaacccaagttttcatggagcaaagggacagagtggcttgtcaacagcagc
agaatactcatatgggaagatggtagcttggaaatcaacaacattacaagaaatgatgga
ggaatctatacatgctttgcagaaaataatagaggaaaagctaacagcactgggactctg
gtgataacaaatcccacgcggatcattctggccccaatcaatgctgatatcactgttgga
gaaaatgctaccatgcagtgtgctgcgtctttcgatccggccttggatctcacgtttgtt
tggtccttcaatggctacgtgattgattttaacaaagaaattacacacattcattaccag
aggaactttatgctcgacgccaatggggagctgctcatccgaaatgcacaactgaaacat
gcaggccggtacacgtgcacggcgcagacaatcgtggacaactcttcagcttcagctgac
cttgtggttcgaggccccccaggccctccaggaggcctgagaatagaagacatcagagct
acctctgtggcactgacttggagccgtggttcagacaatcacagccctatctctaaatac
actatccagaccaagacgattctctcagacgactggaaagatgctaagaccgatccccca
atcattgaaggaaacatggagtcagcaaaagcagtggatttgatcccatggatggagtat
gagtttcgagtggtggcgaccaatactttagggactggagagcccagcataccctcaaac
aggatcagaacagacggtgctgcaccaaatgtggctccctcagatgtaggcggtgggggc
gggaccaacagagagctgacaataacgtgggcgcctttgtcgagagagtaccactacggt
aacaactttggctacatagtggcatttaagccttttgacggagaagagtggaagaaagtg
accgttactaacccagacaccggtcgctatgtccacaaagacgaaaccatgacgccttcc
accgcctttcaagtcaaagtgaaagctttcaacaacaaaggagatgggccctacagcctc
atagctgttatcaactctgcacaagatgctcccagtgaagcccccacagaggttggcgtc
aaagtgttatcatcatctgagatctctgtccattggaagcatgtgttagagaaaattgtg
gaaagctatcagattcggtactgggctgggcatgacaaagaatcagctgcacacagagtg
caagtcaccagccaggagtactcagccaggctggagaaccttctgcccgacacccagtac
ttcattgaagtgggagcctgcaacagtgccgggtgcggaccttccagtgacgtgatcgag
actttcaccagaaaagcccctcctagccagccgccaagaatcatcagttccgtgaggtct
ggctcccgatatataatcacgtgggatcatgttgtcgcgctatccaatgaatctacagtg
acgggctacaagatcctctatagacccgacgggcagcatgatgggaagctgttctcaact
cataaacactccatagaagttccaatcccccgagacggagagtacgtcgttgaagttcga
gcacacagtgacggcggagacggcgtcgtgtctcaagtcaaaatttcaggtgtgtccacg
ctatcttcgagtctcctcagtttgctcctgccctcccttggctttcttgtctacttggaa
ttctga
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