Apodemus sylvaticus (European woodmouse): 127667490
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Entry
127667490 CDS
T10613
Symbol
Scrib
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04390
Hippo signaling pathway
asyl04530
Tight junction
asyl05165
Human papillomavirus infection
asyl05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
127667490 (Scrib)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
127667490 (Scrib)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
127667490 (Scrib)
09172 Infectious disease: viral
05165 Human papillomavirus infection
127667490 (Scrib)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_8
LRR_14
LRR_4
PDZ_2
LRR_1
LRR_9
LRR_LRWD1
Pept_S41_N_bact
MscS_porin
Motif
Other DBs
NCBI-GeneID:
127667490
NCBI-ProteinID:
XP_052016469
LinkDB
All DBs
Position
17:complement(44831175..44853432)
Genome browser
AA seq
1638 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCSLQVVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLN
LRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRL
PDGFTQLRSLAHLALNDVSLQALPGDVGSLANLVTLELRENLLKSLPASLSFLVKLEQLD
LGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELG
GLALLTDLLLSQNLLQRLPEGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENL
LTALPRSLGKLTKLTNLNVDRNHLEVLPPEIGGCVALSVLSLRDNRLAALPPELAHTAEL
HVLDVAGNRLRSLPFALTHLNLKALWLAENQAQPMLRFQTEDDAQTGEKVLTCYLLPQQP
LPSLEEAGQQSSPSESCSDAPLSRVSVIQFEDTLEGEEDAEEAAAEKRGLQRRATPHPSE
LKVMKRGIEERRNEAFVCKPDPSPPSPSEEEKRLSAESALSGGSDPSASTASEGEPEILS
AEGQGLGQHEAMPGQEEYTEDYNEPTVHFAEDTLTSREDGGSEEGQPESAWPPPSGRQRL
IRKDTPHYKKHFKISKLPQPEAVVALLQGVQTDREGPTAGWHNGPHTPWAPRAHEEEEED
EENRDEEEGEATTEEDDKEEAVASAPSVKGVSFDQANNLLIEPARIEEEELTLTIVRQTG
GLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQDAEHHEA
VEALRGAGTAVQMRVWRERMVEPENAVTITPLRPEDDYSPREWRGGGLRLPLLQPEPPTP
IRQRHAACLVRSEKGLGFSIAGGKGSTPYRAGDAGIFISRIAEGGAAHRAGTLQVGDRVL
SINGVDMTEARHDHAVSLLTAASPTISLLLERETGGTYPPSPPPHSSPTPTATVAATMTT
AIPGEPLLPRLSPSLLASALEGPYPVEEICLPRAGGPLGLSIVGGSDHSSHPFGVQDPGV
FISKVLPRGLAARCGLRVGDRILAVNGQDVREATHQEAVSALLRPCLELCLLVRRDPPPP
GMRELCIQKAPGEKLGISIRGGAKGHAGNPCDPTDEGIFISKVSPTGAAGRDGRLRVGLR
LLEVNQQSLLGLTHAEAVQLLRSVGDTLTVLVCDGFDTSTSTALEVSPGVIANPFAAGLG
HRNSLESISSIDRELSPEGPGKEKELANQTLPWEPESAEATGRNLEPLKLDYRVLAAVPS
AGSLHRGPSATTGGKMTEAPCSPGSQQTKPGVIQPLAQAWPRDSPSPRGRGGPCSPPSPD
ELPANVKQAYRAFAAVPTVHPPESSAAQPPTPGPAASPEQLSFRERQKYFELEVRVPQAE
GPPKRVSLVGADDLRKMQEEEARKLQQKRAQMLREEAVTSGPGMGLASDRESPDDQQEAE
QPWAVPSHAGSPSPASPPPLGASAPVRTAKAERRHQERLRMQSPELPAPERALSPAERRA
LEAEKRALWRAARMKSLEQDALRAQMVLSKSQEGRGKRGPLERLAESPSPAPTPSPTPLE
DFGLQTSASPGRLSPDFVEELRTLEPSPSPGPQEEDGEVALVLLGRPSPDAMGPEDMTLC
SSRRAVRPGRRGLGPVPS
NT seq
4917 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtgcatcccgctctggcgttgtaaccggcacgtggagtcggtggataagcgg
cattgctcgctgcaggttgtgccagaggagatttaccgctacagtcgtagcctcgaggaa
ctgctcctcgacgccaaccagctgcgcgagctacctaagcccttcttccggcttttgaat
ttgcgaaagctgggcctcagcgacaacgagatccagcggctgcctcctgaagtggctaac
ttcatgcaactggtggagctggatgtgtcccggaatgacattcccgagatccctgagagc
ataaagttctgcaaggccctggagattgcggacttcagtgggaaccccctatccaggctt
ccggatggcttcacacagctgcgcagcctggctcacctggccctgaatgacgtgtccctg
caggcactgcctggagatgtgggcagcctggccaatttggtgaccctggaactccgggag
aacttgcttaaatctctccctgcgtccctgtctttcctggtgaagctagaacagctggat
ctgggaggcaatgatctggaagtgctgcctgacactctgggagctctgcctaaccttcga
gagctgtggctagaccggaaccaactgtcggcgctgcccccggagctaggcaatctgcgg
cggctggtctgcctggatgtgtcagagaacaggctggaggagctacctgtggagttgggt
gggctggcactgctcacagatctgctgctttcccagaacctgcttcagcggctgccagag
ggcatcggtcagctgaagcagctgtctatcctgaaggtggaccagaaccggctctgtgaa
gtcaccgaggccataggggactgtgagaacctctcggaactgatcctcacagagaacctg
ttaacggctttaccccgctccctgggcaagctgaccaaactgactaacctcaatgtggac
cggaatcatctcgaggtgctgccacctgaaatcggaggctgtgtggcccttagtgtcctg
tctctgagagacaaccgcctggctgcccttcctcctgagcttgcccatacagctgagctg
catgtgcttgacgtagccgggaaccggctgcggagtctgccgtttgcgctcacccacctc
aacctcaaggcactgtggctggctgagaaccaggcacaacccatgctccgcttccagact
gaggatgatgcccagactggtgaaaaggtgcttacctgctacctgctgccccagcagccc
ttgccaagtctcgaagaggctggacagcagagcagtccctccgagagctgtagtgatgcc
cctctaagccgtgtcagtgtcatccagttcgaggacacccttgaaggtgaagaggatgct
gaggaggctgcagctgagaagcggggcctacagcgtcgggccacccctcatcccagtgag
ctcaaggtgatgaagaggggcatcgaagagcgccgcaacgaggcctttgtctgcaagccc
gaccccagcccaccctcaccttcggaggaggagaagaggctgagtgcagagtctgccttg
agtggaggctctgacccatcagcaagcacagcctccgaaggagagcctgagatcctctcg
gctgagggacaaggactaggccagcacgaggccatgcctggacaggaggaatacacagag
gactataatgagcccacagtgcactttgcagaggacacactgacctctagggaagacggt
ggaagtgaagaggggcagcctgagtccgcctggccgccacccagtggacgccagaggctc
atccgcaaagacacaccccactataagaagcacttcaagatctccaagctcccgcagcct
gaagctgttgtggccctgctacaaggggtgcagacagacagggagggccccaccgcaggt
tggcacaatggcccacacacaccttgggctcctcgagcccatgaggaggaggaagaggac
gaggagaacagggatgaggaagaaggcgaggccaccacagaagaagatgacaaagaagag
gctgtggcttctgctccctctgtcaagggggtgtcgtttgaccaggccaataacctgctg
atagagcctgctcgcattgaggaggaagagttaacactcacgatcgtgcggcagacaggg
ggcctgggcatcagtatcgcagggggaaaaggctccaccccctacaaaggagacgatgag
ggcattttcatctctcgggtgtctgaagagggtcctgcagcccgtgctggagtgcgagtt
ggtgacaaacttctcgaggtgaacggtgtggccttgcaggatgcagagcaccatgaggct
gtggaagcacttcggggagcaggcactgctgtgcagatgcgtgtgtggagggagaggatg
gtggagcccgagaacgctgtcaccatcaccccactacgccctgaggatgactacagtccc
cgggagtggcggggaggtggcctgcgcctgcccctgctccagcccgagccccccacacct
atccgtcagcgccacgccgcctgtcttgtgcgcagtgaaaagggcctaggcttcagcatc
gccgggggaaagggctccacgccttaccgggctggtgatgcgggcatctttatatctcgc
attgcagagggaggggctgcccaccgggcaggcactctacaagttggcgaccgtgtcctc
tcgatcaatggagtggacatgactgaggcaaggcacgatcatgctgtctccctgctgact
gctgcttcccctaccatttccctgctcctggagcgggagactggagggacttacccacct
agccccccgccacattcctccccaacccctaccgcaactgttgctgctaccatgaccact
gccatccccggggaacctctgctgcctaggctatcccctagcctcttggcctctgccttg
gaaggaccataccctgtggaggaaatctgcctgcccagggctggtggtccactggggctt
agcattgtaggcggctctgatcactccagccacccatttggtgtccaggatcctggtgta
ttcatctccaaggtgcttcctcggggcctagctgctcgctgtggccttcgggttggggac
cgcatcctagcagtgaatgggcaggatgttcgggaggccacacatcaagaggcagttagt
gccctgctcaggccctgcctggagctatgtctgcttgtgcggagggatcctccaccccca
ggcatgcgggaactctgcatccagaaggcccctggggagaagctgggtatcagtatccga
ggaggtgccaagggtcacgctgggaacccctgtgaccctacagatgagggcatctttatc
tccaaggtgagccctacgggagctgccgggcgtgatgggcggctgcgtgtggggctgcgg
ctgcttgaggtgaaccaacagagcctgctgggccttacacatgctgaggcagtgcagctg
ctgcgcagcgtgggtgataccctcaccgtgcttgtctgcgatggctttgacaccagcacc
agcacagccctggaggtgtccccaggtgtcattgccaacccatttgcagcaggccttggc
cacaggaacagtctggaaagcatttcatccattgaccgggaactgagtcctgaaggccca
ggcaaggagaaagagttggccaatcaaacccttccctgggagcctgagtctgcagaggcc
acgggtcggaatctagagcccctaaagctggactaccgtgtcctggctgccgtgcccagt
gctgggagtttacacagaggaccatctgcgaccactggaggaaagatgaccgaggccccc
tgttcccctggcagtcagcaaacaaaaccaggggtgatccagccattggctcaggcctgg
ccaagggactccccgtcccccaggggcagaggtggtccctgttctccgccctcccctgat
gagctgccagccaatgtgaagcaggcgtatagggccttcgcagctgtgcccaccgtgcat
cctcctgagagcagtgctgcccagccgcccacacctggtcccgcagcctccccagagcag
ctgtccttccgtgaacgacaaaagtacttcgagctggaggtgcgggtgcctcaagcagag
ggtcccccaaagcgtgtgtccctggtgggcgctgatgacctgcggaagatgcaggaggag
gaagctcgcaagctgcagcagaagagggcacagatgcttcgggaagaagcagtaacctca
gggcctggcatggggctcgcctcagacagggagtccccagacgatcagcaggaggctgag
cagccctgggctgtgccaagccatgcaggaagccctagcccggcatcacccccacccctg
ggagccagcgcccctgtgaggacagccaaagctgagcgacgccaccaggaacggttgcgc
atgcagagccctgagcttcctgcccctgagcgggccctgtctcctgcagagcgaagggct
ctggaggcagagaagcgagccctgtggagggcagccagaatgaagtctctggagcaggat
gccctccgtgcacagatggtcctcagcaagtcccaggaaggccgcggcaagagaggaccc
ttggagcggctggctgagtccccttcacctgcacccaccccatcccccaccccattagaa
gacttcggcctccagaccagtgcctcccctggacgcttgtcaccagatttcgtggaggag
ctgaggactttggaaccatctcccagtcctggcccacaggaagaagatggagaagtggcc
ctggtgctccttggcaggccctcacctgatgccatgggccctgaagatatgacgctgtgc
agtagccgtcgggctgtgcggcctggacgccggggcctgggccctgtgccctcctag
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