KEGG   Apodemus sylvaticus (European woodmouse): 127667591
Entry
127667591         CDS       T10613                                 
Symbol
Polr2k
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC4 isoform X1
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
asyl  Apodemus sylvaticus (European woodmouse)
Pathway
asyl03020  RNA polymerase
asyl03420  Nucleotide excision repair
asyl04623  Cytosolic DNA-sensing pathway
asyl05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:asyl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    127667591 (Polr2k)
  09124 Replication and repair
   03420 Nucleotide excision repair
    127667591 (Polr2k)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    127667591 (Polr2k)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    127667591 (Polr2k)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:asyl03021]
    127667591 (Polr2k)
   03400 DNA repair and recombination proteins [BR:asyl03400]
    127667591 (Polr2k)
Transcription machinery [BR:asyl03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     127667591 (Polr2k)
  RNA polymerase III system
   RNA polymerase III
     127667591 (Polr2k)
  RNA polymerase I system
   RNA polymerase I
     127667591 (Polr2k)
DNA repair and recombination proteins [BR:asyl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      127667591 (Polr2k)
SSDB
Motif
Pfam: Zn_ribbon_RPAB4 Cytochrome_C7 DmmA-like_C A2L_zn_ribbon MCM_OB DUF5816 HypA Cytochrom_c3_2 Zn_ribbon_13
Other DBs
NCBI-GeneID: 127667591
NCBI-ProteinID: XP_052016677
LinkDB
Position
17:4070145..4072333
AA seq 99 aa
MILGVNLGQTQERDLALKFFWAAGRGSTLCHPSAWEAEALKMDTQKDVQPPKQQPMIYIC
GECHTENEIKSRDPIRCRECGYRIMYKKRTKRLVVFDAR
NT seq 300 nt   +upstreamnt  +downstreamnt
atgattttgggagtaaatttggggcaaacccaggagagagacttggctttaaaatttttc
tgggcagccgggagaggtagcacactctgccacccgagcgcttgggaagctgaggcacta
aaaatggacacccagaaagatgttcaaccaccaaagcagcagccaatgatttatatttgt
ggagagtgtcacaccgaaaatgagataaaatccagggatccaatcagatgcagagaatgt
ggctacagaataatgtacaagaaaagaacgaaacgattggtggtttttgatgctcgatga

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