KEGG   Apodemus sylvaticus (European woodmouse): 127667632
Entry
127667632         CDS       T10613                                 
Symbol
Tuba1c
Name
(RefSeq) tubulin alpha-1C chain
  KO
K07374  tubulin alpha
Organism
asyl  Apodemus sylvaticus (European woodmouse)
Pathway
asyl04145  Phagosome
asyl04210  Apoptosis
asyl04530  Tight junction
asyl04540  Gap junction
asyl04814  Motor proteins
asyl05010  Alzheimer disease
asyl05012  Parkinson disease
asyl05014  Amyotrophic lateral sclerosis
asyl05016  Huntington disease
asyl05020  Prion disease
asyl05022  Pathways of neurodegeneration - multiple diseases
asyl05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:asyl00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    127667632 (Tuba1c)
  09143 Cell growth and death
   04210 Apoptosis
    127667632 (Tuba1c)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    127667632 (Tuba1c)
   04540 Gap junction
    127667632 (Tuba1c)
  09142 Cell motility
   04814 Motor proteins
    127667632 (Tuba1c)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    127667632 (Tuba1c)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    127667632 (Tuba1c)
   05012 Parkinson disease
    127667632 (Tuba1c)
   05014 Amyotrophic lateral sclerosis
    127667632 (Tuba1c)
   05016 Huntington disease
    127667632 (Tuba1c)
   05020 Prion disease
    127667632 (Tuba1c)
   05022 Pathways of neurodegeneration - multiple diseases
    127667632 (Tuba1c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:asyl03019]
    127667632 (Tuba1c)
   03036 Chromosome and associated proteins [BR:asyl03036]
    127667632 (Tuba1c)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:asyl04812]
    127667632 (Tuba1c)
   04147 Exosome [BR:asyl04147]
    127667632 (Tuba1c)
Messenger RNA biogenesis [BR:asyl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     127667632 (Tuba1c)
Chromosome and associated proteins [BR:asyl03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     127667632 (Tuba1c)
Cytoskeleton proteins [BR:asyl04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    127667632 (Tuba1c)
Exosome [BR:asyl04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   127667632 (Tuba1c)
  Exosomal proteins of other body fluids (saliva and urine)
   127667632 (Tuba1c)
  Exosomal proteins of colorectal cancer cells
   127667632 (Tuba1c)
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 127667632
NCBI-ProteinID: XP_052016747
LinkDB
Position
17:complement(71034504..71043244)
AA seq 449 aa
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGADSAEGDDEGEEY
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgcgtgagtgcatctccatccacgttggccaggctggggtccagatcggcaatgcctgc
tgggagctctactgcctggaacacggcatccagcctgatggccagatgccaagtgacaag
accattgggggaggagatgactccttcaacaccttcttcagtgagacaggagctggcaag
cacgtgccccgggcagtgttcgtagacctggagcccacggttattgatgaggtccgcacc
ggcacctaccgccagctcttccaccccgagcagctcatcactggcaaggaagatgctgcc
aataactatgcccgtggccactacaccattggcaaggagatcattgaccttgtcctggac
aggatccgcaagctggctgaccagtgcacaggtctgcagggcttcttggttttccacagc
tttggcgggggaactggctctgggttcacctccctgctgatggagcggctctctgttgat
tacggaaagaagtccaagctggaattctccatttacccagccccccaggtttccactgct
gtggttgagccctacaattccatcctcaccacccacaccaccctggagcactctgattgt
gccttcatggtagacaatgaggccatctatgacatctgtcgtagaaacctcgacatcgag
cgcccaacctacactaaccttaaccgccttattagccagattgtgtcttccatcactgct
tccctcagatttgatggggccctgaatgttgatctgacagaattccagaccaacctggtg
ccctaccctcgcatccacttccccctggccacttatgcccctgtcatctctgctgagaaa
gcctaccatgagcagcttacagtagcagagatcaccaatgcctgctttgagccagccaac
cagatggtgaaatgtgaccctcgccatggtaaatacatggcttgctgcctgctgtaccgt
ggtgatgtggttcccaaagatgtcaatgctgccattgccaccatcaagaccaagcgtacc
atccagtttgtggactggtgccctactggcttcaaggttggcattaattaccagcctccc
actgtggtacctggtggtgacctggccaaggtccagagagctgtgtgcatgctgagcaac
accacagccattgctgaggcctgggctcgcctagatcacaagtttgatctgatgtatgcc
aagcgtgcctttgtgcactggtatgtgggtgagggcatggaggagggggagttctctgag
gcccgtgaggacatggctgccctagagaaggattatgaggaggttggggcagatagtgct
gaaggagatgatgagggtgaagaatattaa

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