Apodemus sylvaticus (European woodmouse): 127668688
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Entry
127668688 CDS
T10613
Symbol
Lsm4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl03018
RNA degradation
asyl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127668688 (Lsm4)
09123 Folding, sorting and degradation
03018 RNA degradation
127668688 (Lsm4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asyl03019
]
127668688 (Lsm4)
03041 Spliceosome [BR:
asyl03041
]
127668688 (Lsm4)
Messenger RNA biogenesis [BR:
asyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127668688 (Lsm4)
mRNA degradation factors
5'-3' decay
Lsm complex
127668688 (Lsm4)
Spliceosome [BR:
asyl03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
127668688 (Lsm4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
127668688
NCBI-ProteinID:
XP_052018378
LinkDB
All DBs
Position
18:complement(70685788..70691116)
Genome browser
AA seq
138 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVREEAAKGRGRGGPQQQKQQKGRGMGGVGRGVFGGRGRGGIP
GAGRGQPEKKPGRQAGKQ
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
atgcttcccttgtcgctgctgaagacggcgcagaatcaccccatgctggtggagctgaag
aacggagagacgtacaacgggcacctggtgagctgcgacaactggatgaacatcaacctt
cgagaggtgatctgcacgtcacgggatggcgacaagttctggaggatgcccgagtgctac
atccgcggcagcaccatcaagtacctgcgcatccccgatgagatcatcgacatggtgcgg
gaggaggccgccaagggccgcggacggggaggcccgcagcagcagaagcagcagaaaggc
cgaggcatgggcggcgttggccgaggtgtgtttggcggccggggccggggtggcatccca
ggcgcaggccgtggccagcccgagaagaagccaggacggcaggcgggcaagcagtga
DBGET
integrated database retrieval system
