Apodemus sylvaticus (European woodmouse): 127668812
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Entry
127668812 CDS
T10613
Symbol
Polb
Name
(RefSeq) DNA polymerase beta
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl03410
Base excision repair
asyl05166
Human T-cell leukemia virus 1 infection
asyl05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
127668812 (Polb)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
127668812 (Polb)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
127668812 (Polb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asyl03400
]
127668812 (Polb)
Enzymes [BR:
asyl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
127668812 (Polb)
DNA repair and recombination proteins [BR:
asyl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
127668812 (Polb)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
127668812 (Polb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
HHH_8
DNA_pol_B_thumb
HHH_5
Cdd1
HHH
HHH_2
NTP_transf_2
Motif
Other DBs
NCBI-GeneID:
127668812
NCBI-ProteinID:
XP_052018570
LinkDB
All DBs
Position
18:complement(20128101..20153580)
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AA seq
335 aa
AA seq
DB search
MSKRKAPQESLNGGITDMLVELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAK
KLPGVGTKIAEKIDEFLATGKLRKLEKIRQDDTSTSINFLTRVTGIGPSAARKFVDEGIK
TLEDLRKHEDKLNHHQRIGLKYFEDFEKRIPREEMLQMQDIVLNEVKKVDPEYIATVCGS
FRRGAESSGDMDVLLTHPNFTSESSKQPKLLHRVVEQLQKVHFITDTLSKGETKFMGVCQ
LPSESDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRP
LGVTGVAGEPLPVDSEQDIFDYIQWRYREPKDRSE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacgcaaggcgccgcaggagtccctcaacggcggcatcacggacatgctcgtg
gaactcgcaaactttgagaagaacgtgagtcaggcgatccacaagtacaatgcatacaga
aaagcagcatctgtgatagcaaagtacccacacaaaattaagagtggagcagaagctaag
aaactgccaggagtaggaacaaaaattgctgaaaagattgatgaatttttagcaactgga
aaattgcgtaaactggaaaagattcgtcaggatgatacaagcacatccatcaatttcctg
actcgagttactggcattgggccatctgctgcaaggaagtttgtagatgaaggaattaaa
acattagaagatctcaggaaacatgaagataaattgaaccatcatcaacgaattggactg
aaatactttgaggactttgaaaagagaattcctcgtgaggagatgctgcagatgcaggat
attgtacttaatgaagttaaaaaagtggatcctgaatacattgctacagtctgtggcagt
ttcagaagaggcgcagagtccagtggagacatggacgttctgctgacccacccaaacttc
acgtcagaatcaagcaagcagccaaagttgttacatcgtgttgtggaacagttacaaaaa
gtccatttcattacagatactctgtcaaagggtgaaacaaagttcatgggtgtttgccag
cttcccagtgagagtgacgagaaggagtatccacacaggagaatcgacatcaggttgatc
cccaaagaccagtactactgcggtgttctctacttcactgggagtgacatcttcaataag
aacatgagagcacatgccctggaaaagggcttcacaatcaacgagtacaccatccgcccc
ctgggcgtcaccggagttgctggggagcctcttcccgtggacagcgagcaggacattttt
gattacatccagtggcgctaccgggagcccaaggatagaagtgaatga
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