Apodemus sylvaticus (European woodmouse): 127669450
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Entry
127669450 CDS
T10613
Symbol
Vars2
Name
(RefSeq) valine--tRNA ligase, mitochondrial isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
127669450 (Vars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
asyl01007
]
127669450 (Vars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
asyl03016
]
127669450 (Vars2)
Enzymes [BR:
asyl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
127669450 (Vars2)
Amino acid related enzymes [BR:
asyl01007
]
Aminoacyl-tRNA synthetase
Class I (U)
127669450 (Vars2)
Transfer RNA biogenesis [BR:
asyl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
127669450 (Vars2)
Prokaryotic type
127669450 (Vars2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
127669450
NCBI-ProteinID:
XP_052019350
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All DBs
Position
19:1737695..1748580
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AA seq
1081 aa
AA seq
DB search
MPHLPLASFRPPLWGPRPSWGLSRPQALCTQPEPHGSPVSRRNREAKQKRVREKQAALEA
GLAEKSKIPAVPTKAWSHKEKVLYEIPTEPGEKKDVSGPLPPAYSPQYVEAAWYQWWVRE
GFFKPEYQARLPQATGATFSMCVPPPNVTGSLHIGHALTVAIQDALVRWHRMRGDRVLWI
PGSDHAGIATQAVVEKQLWKEQRVRRHELSREDFLRAVWRWKHEKGGEIYEQLCALGASL
DWDRECFTMDAGSSAAVTEAFVRLYNSGLLYRNRQLVNWSCTLRSAISDIEVESRPLPGR
TVLQLPGCPTPVSFGLLVSVAFPVDGEPDAEIVVGTTRPETLPGDMAVAVHPDDPRYTHL
HGRQLRHPLTGQLLPIITDTTVQPHVGTGAVKVTPAHSPADAEMGTRHGLTPLNVIAEDG
TMTSLCGDWLQGLHRFVAREKIMCTLRERGLFRGLQEHPMVLPICSRSGDVVEYLLKSQW
FVRCQEMGDRAAKARPVWGASEHCDEAQSGEPPVAVESGALELWPSFHQKSWQHWFSHIG
DWCVSRQLWWGHQIPAYQVVGENAEDDRKECWVVARSEAEARAVAAKQTGRPEAELTLER
DPDVLDTWFSSALFPFSALGWPRETPDLARFYPLTLLETGSDLLMFWVGRMVMLGTQLTG
QLPFSKVLLHSMVRDRQGRKMSKSLGNVLDPRDIISGQELQVLQAKLREGNLDPGELAVA
AAAQKKDFPYGIPECGTDALRFALCSHGILGGDLHLSVSEVLNYRHFCNKLWNALRFILR
ALGDNFVPQPAEKVTPSSPMDAWILSRLAFAANECERGFLSRELSLVTHTMYHFWLHNLC
DVYLEAVKPVLSNVPCPPGPPQVLFSCADVGLRLLAPLMPFLAEELWQRLPPRQDGPLAP
SICVAPYPSAHSLESWRQPELERCFSRVQEVIQALRALRATYQLTKAQPQVLLQSSDPGE
QGLVQPFLEPLGVLSHCGAVGFLPPGAAAPSGWALAPLGDTMKIYMELQGLVDPQSQLPR
LAARRQKLQRQLDGLLNQTVSEGLTEKQQRVSSLQLELSKLDQAASHLRQLLDEAPSARE
L
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgcctcatttacctctggcctccttccggccaccgctgtgggggccgaggccctcatgg
ggtctctccaggccccaggcactttgtacacagccggagccccacggctccccggtctcg
cggaggaaccgtgaagccaaacagaagcgcgtgcgggagaagcaggcggccctggaggct
gggttagctgagaagagcaagatacctgcagtgcccactaaggcctggagtcacaaggag
aaagtattgtatgaaatccccaccgagccaggtgaaaagaaagatgtttctgggcccctg
cctcctgcttacagtccccaatatgtcgaagcggcctggtaccaatggtgggtgcgtgag
ggcttcttcaaaccagagtatcaggcaaggctgccccaagctaccggggcgaccttttcc
atgtgtgtcccaccgcccaatgtcaccggctccctgcacatcggccatgcgctcacagtg
gcgatacaggatgcacttgtgcgctggcaccggatgcgtggggatcgtgtgctgtggatc
cccgggtcagatcacgcaggaattgctacacaggctgtggtggagaaacagctgtggaag
gagcagagagtccggagacacgagctgagccgggaggacttcctcagggccgtgtggcgg
tggaaacatgagaaaggaggggagatctatgagcagctgtgtgctctgggcgcctctctg
gactgggatagagagtgtttcaccatggatgctggctcctcagcagccgtgacggaagct
tttgtgagactctacaactcgggattgttgtaccggaaccgccagcttgtcaactggtcg
tgcactttgagatcggccatctcagacattgaggtggagagccggcccctgccaggccgc
acggtgctgcagctgcccggctgcccgacccctgtgtcctttgggctccttgtttctgtt
gctttccctgtggatggagagcctgacgcagagattgtggtgggaaccaccaggccagag
accctgcctggagatatggctgtagctgttcacccagacgaccctagatacacgcattta
catggacgacagctccgacaccctttgacaggacagcttctgcccatcatcacagacacc
actgttcagccacatgtgggcacaggagcagtgaaggtgactcctgctcacagtccggca
gatgctgagatgggaacccggcatggcttgaccccactgaacgtcattgcagaggatggg
accatgacatccctctgtggagactggctgcagggtcttcaccgatttgtggcccgggaa
aagatcatgtgcacactgagggaacggggcctgttccggggcctacaggagcaccccatg
gtactgcccatctgcagccgttccggggacgtggtggagtacctgctgaagagccagtgg
tttgtccgctgccaggaaatgggggaccgagctgccaaggcaaggcccgtgtggggagct
tctgagcattgtgacgaagcccagagtggagaacctcctgtcgctgtggagtcaggggct
ctggagctctggccctccttccaccagaagagctggcaacactggttttcccacattggg
gactggtgtgtctcccggcagctgtggtggggccatcagattccagcctaccaggtcgtt
ggagagaatgcagaggatgacaggaaggaatgctgggtggtcgcacggtcagaggctgaa
gccagagcggtagcagcaaaacagacagggagaccagaggcagagctgaccctggagagg
gaccctgacgtcctggacacttggttctcttcagctcttttccccttttccgccctgggt
tggccccgagagacgccagacctcgctcgcttttaccccctcacactcctggaaacgggt
agcgacctcctgatgttttgggtgggccgcatggtcatgctggggacccagctcactggg
cagctccccttcagcaaggtgcttcttcactccatggtccgggacaggcagggccggaag
atgagcaagtccctggggaatgtgctagacccccgggacatcattagtgggcaggagctg
caggtgctacaggccaagctgagagagggcaacttggacccgggagagctcgctgttgca
gctgcagcacagaaaaaggactttccttatgggatccctgagtgtgggacggatgccctg
aggtttgcactatgctcccatggaatcctggggggcgacctgcacctgtctgtctctgag
gtcctgaactaccgccatttctgcaacaagctctggaacgccctgcgcttcatcctccgt
gcactgggggacaacttcgtgcctcagcctgcagagaaggtaacgccctcctctcccatg
gacgcctggattctgagccgcttggcctttgcggccaatgaatgtgagaggggcttcctc
agccgggagctttcgctcgtcacccacaccatgtatcatttctggctccacaatctctgt
gatgtctacctggaagcggtgaagccggtgctgtcgaatgtgccctgtcccccaggaccc
ccgcaggtcctgttctcctgcgcagatgtgggtctgcgcctcctcgccccgctgatgccc
ttcctggcagaagagctgtggcagaggctgccccccaggcaagatggcccccttgccccc
agcatctgtgtggccccctaccccagtgcccacagcctggagtcctggcgtcagccggag
ctggagcgctgcttctccagagtccaggaggttatacaggcactgcgggcgctgcgagcc
acctaccagctcacaaaagcccaaccccaagtgctgctgcagagctcagaccccggagaa
caaggcctagtccagcccttcctggagcctctgggtgtcctgagccactgcggggctgta
ggattcctgcccccaggggccgcagctccctcagggtgggccctggccccactgggtgac
accatgaagatctacatggagctgcagggcctggtggacccccagagccagctacctcgc
ctagctgcccgaaggcagaagttacagcggcagcttgatggcctcttgaaccagaccgtg
tcagagggtcttacagagaagcagcagagggtttcctccctccaattggaattgtccaag
ctggaccaggcagcctcccacctacggcaactgctggatgaggctcccagtgccagggag
ctctga
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