Apodemus sylvaticus (European woodmouse): 127670218
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Entry
127670218 CDS
T10613
Symbol
Smarcb1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform X1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl03082
ATP-dependent chromatin remodeling
asyl03250
Viral life cycle - HIV-1
asyl04714
Thermogenesis
asyl05225
Hepatocellular carcinoma
Brite
Protein phosphatases and associated proteins [BR:
asyl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127670218 (Smarcb1)
Transcription machinery [BR:
asyl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
127670218 (Smarcb1)
SWI/SNF complex
127670218 (Smarcb1)
Chromosome and associated proteins [BR:
asyl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
127670218 (Smarcb1)
PBAF complex
127670218 (Smarcb1)
SWI/SNF complex
127670218 (Smarcb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
127670218
NCBI-ProteinID:
XP_052020556
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Position
19:11719614..11744153
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AA seq
385 aa
AA seq
DB search
MMMMALSKTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEER
KKIVASSHGKKTKPNTKDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYL
REQKAKRNSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENA
SQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASA
IRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSE
LGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAE
MEKKIRDQDRNTRRMRRLANTAPAW
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggcgttgagcaagaccttcgggcagaagcccgtcaagtttcagctggag
gacgacggggagttctacatgatcggctccgaggtgggcaactacctgcgtatgttccga
ggttctctgtacaagaggtatccctcactctggcggcgactagccactgtggaagaaagg
aagaaaatagtggcctcgtcacatggtaaaaaaacaaaacctaacactaaggatcatggc
tacaccacccttgccaccagcgtgacgctactgaaagcctcagaggtggaagagattctg
gacggcaatgatgagaaatacaaggccgtgtccatcagcacagagcccccgacctacctc
agggaacagaaggccaagagaaacagccagtgggtccccaccctgcccaacagctcccac
catctggacgccgtgccgtgttccaccaccatcaacaggaaccgcatgggtcgggacaag
aagagaaccttccccttgtgctttgatgaccacgacccggctgtgatccacgagaatgca
tcccagcctgaggtgctggtgcccatccgactggacatggagatcgacgggcagaagctg
cgagacgcatttacctggaacatgaatgagaagctaatgacccctgagatgttttcagaa
atactttgtgatgacctggatttgaatccactgacttttgtgccagctattgcctctgcc
attcggcagcagattgagtcctaccccacagacagcatcctggaggaccaatcagaccag
cgtgtcatcatcaagctgaacattcatgtggggaacatctccctggtggaccagtttgaa
tgggacatgtcagagaaagagaactccccagagaagtttgccctgaagctgtgctcggag
ctgggcttgggcggggagtttgtcaccaccattgcatacagcatccgaggacagctgagc
tggcaccagaagacctatgccttcagtgagaacccacttcccacagtggagattgctatc
cgaaataccggagatgctgaccagtggtgccccctgctggagacactgaccgatgcggag
atggagaagaagatccgggatcaagacagaaacacgaggcgaatgaggcgtctcgccaac
actgccccagcctggtga
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