Apodemus sylvaticus (European woodmouse): 127670246
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Entry
127670246 CDS
T10613
Symbol
Ddx21
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
asyl03009
]
127670246 (Ddx21)
03036 Chromosome and associated proteins [BR:
asyl03036
]
127670246 (Ddx21)
Enzymes [BR:
asyl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127670246 (Ddx21)
Ribosome biogenesis [BR:
asyl03009
]
Eukaryotic type
Pre-60S particles
Helicases
127670246 (Ddx21)
Chromosome and associated proteins [BR:
asyl03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
127670246 (Ddx21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
Cas3-like_C_2
AAA_30
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
127670246
NCBI-ProteinID:
XP_052020600
LinkDB
All DBs
Position
19:24886993..24907244
Genome browser
AA seq
777 aa
AA seq
DB search
MPGKLRSASKAGSDGAEESMETLPKPSEKKSRKEKAKSKTEEATEGVEEATSSKAKAVKK
KGPSEDDVGPPKSKKAKKQEEEPQDDAPPKSKSSKKKEPLEKTAASKTKEIETEEPSKEE
AEAPKPKKTKKGKDTNGDPGEKSPRLKNGLSHSEPKPSSPDADAPAEDSSSETEKEIPVE
QKEGAFSNFPISEETVKLLKARGVNFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSFAI
PLIEKLQSGLQEKKRGRAPQVLVLAPTRELANQVSKDFSDITKKLSVACFYGGTPYGGQI
ERMRSGIDILVGTPGRIKDHLQNGKLDLTKLKHVVLDEVDQMLDMGFADQVEEILCVAYK
KDSEDNPQTLLFSATCPHWVFNVAKKYMKSTYEQVDLIGKKTQKAAITVEHLAIKCHWTE
RAAVIGDVIRVYSGHQGRTIIFCETKKDAQELSQNTCIKQDAQSLHGDIPQKQREITLKG
FRNGNFGVLVATNVAARGLDIPEVDLVVQSCPPKDVESYIHRSGRTGRAGRTGVCICFYQ
HKEEYQLAQVEQKAGIKFKRIGVPSATEIIKASSKDAIRLLDSVPPTAIGHFKQSAEKLI
EEKGAVEALAAALAHISGATSVDQRSLINSQAGFVTMILRCSIEMPNISYAWKELKEQLG
ESIDAKVKGMVFLKGKLGVCFDVRTEAVTEIQEKWNDSRRWQLTVATEQPELEGPPEGYR
GSRGQRNGGRGAFRGQRGGSRNFRGQGQRGGSRNFRGQRPGGANKGQKRSFSKAFGQ
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgccgggaaaactccgcagtgcgtccaaggcgggatcagacggggccgaggagagcatg
gagacgctgccgaagccaagcgagaagaaatctagaaaagagaaggcaaaatctaagact
gaagaagcaacagaaggagtggaagaggccacttcctccaaggcgaaagcagttaaaaag
aaagggccttccgaagatgacgtgggcccccctaaatccaagaaggccaagaagcaggag
gaggagcctcaagatgacgctcctcctaaaagcaaatcctccaagaagaaggagcccctg
gagaagacagcagcctctaaaaccaaagagatagaaactgaggagccttccaaagaagag
gcagaagctcctaagcccaagaagacgaagaaagggaaggatacaaatggagacccggga
gagaaaagcccccggctgaagaatgggctttcccattcggaaccaaaacccagctcccct
gatgccgacgctcctgctgaagacagtagtagcgagacagagaaggaaatacctgtggaa
cagaaagaaggggctttctctaactttcccatctctgaggagactgtcaagcttctcaaa
gctcgtggggtgaacttcctgtttcctatacaagccaagacattccaccatgtgtacagt
gggaaagacttaattgcccaagcacggacaggaaccgggaagacattctcctttgccatc
cctttgattgagaaacttcaaagtgggctacaggagaagaagagaggccgagcccctcag
gtgctagtcctcgcacccacgagagaattagccaatcaagtgagcaaagacttcagtgac
atcaccaaaaagctctcagtagcttgtttctatggtggaactccctacggtggtcagatt
gagcgaatgcggagtgggattgacatcctggttgggaccccaggtcgcattaaagaccac
ttgcagaatggcaaactagatctcaccaaacttaaacacgtcgtcctggatgaagtcgac
cagatgttggatatgggttttgctgatcaagtggaagaaattttatgtgtggcatacaag
aaagattctgaagacaacccccaaacattgcttttctctgcaacttgccctcattgggta
tttaatgttgctaagaaatacatgaaatctacatacgaacaggtggacctgattggtaaa
aagactcagaaagcagccataactgtggagcatctggccattaagtgtcactggacagag
agggcagcggtgattggcgatgtgatccgagtgtacagtggccatcaggggcgcacgatc
atcttctgtgaaaccaagaaggatgcccaggagctatcgcagaacacatgcataaagcag
gatgcccagtccttacatggcgacattcctcagaagcaaagggagatcactctgaagggt
ttccgaaatggcaattttggagttttggtagcgaccaatgttgctgctcgagggttagac
atccctgaggtcgacttggttgttcagagctgcccaccaaaggatgtggagtcttacatt
caccgttcggggcggacaggcagagccggaaggacaggggtttgcatctgcttttatcaa
cacaaagaagagtaccagttagcgcaagtggagcagaaggcgggaattaaatttaaacgg
ataggtgttccttctgcaacagaaataataaaagcctccagcaaagatgccatcaggctc
ttggattcggtgcctcccactgccattggccatttcaagcagtcggccgagaagctcatt
gaggagaagggagctgtagaggccctggcggctgccctggcccacatctcaggggccacg
tcggtcgaccagcgctccctgatcaactcgcaagcgggctttgtcaccatgatcctgcgg
tgctccattgagatgcccaacatcagctatgcttggaaagaacttaaggagcagctgggc
gagagcatcgacgccaaagtgaagggcatggtcttcctcaaaggaaagctgggagtttgt
ttcgatgtccgcactgaagcagtcacagagatacaggagaagtggaatgattcaagacgt
tggcagctcactgtggccaccgagcagccagagctggaaggacctccagaaggctatcga
ggcagcaggggtcagcggaatggcggccgcggtgctttcagaggacagcggggtggaagc
aggaacttccggggacagggacagcgaggaggaagtagaaacttccgaggacagcgaccg
gggggtgccaacaaaggccagaaacggagttttagtaaagcatttggtcagtga
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