Apodemus sylvaticus (European woodmouse): 127670416
Help
Entry
127670416 CDS
T10613
Symbol
Smarcc2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl03082
ATP-dependent chromatin remodeling
asyl04714
Thermogenesis
asyl05225
Hepatocellular carcinoma
Brite
Transcription machinery [BR:
asyl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
127670416 (Smarcc2)
Chromosome and associated proteins [BR:
asyl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
127670416 (Smarcc2)
PBAF complex
127670416 (Smarcc2)
GBAF(ncBAF) complex
127670416 (Smarcc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
127670416
NCBI-ProteinID:
XP_052020749
LinkDB
All DBs
Position
20:complement(4681215..4712229)
Genome browser
AA seq
1242 aa
AA seq
DB search
MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIVKRHQGTVSEDKSNASHVVYP
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVSDDKSPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQDDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKPPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQNSASQQMLSFPDKGKEKP
TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTASDEPE
RIEESGTEEARAEGQAVDEKKEPKEPREGGGAVEEEAKEEISEGPKKDEEKGKDGDSEKE
SEKSDGDPIVDPEKDKEPTEGQEEVLKEVAEPEGERKTKVERDIGEGNLSTAAAAALAAA
AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA
DRQAFHMEQLKYAEMRARQQHFQHMQQQQQQQQPALPPGSQPMPPTGAAGPPAVHGLAVP
PAAVASAPPGTGAPPGSLGPSEQIGPAGTTAGPQQPQPGAPQPGAVPPGVPPPGPHGPSP
FPNQQTPPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPAAPSVIPFGSLADSISINLPP
PPNLHGHHHHLPFAPGTIPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQSPA
IVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPPQ
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtgaagtactacgaggccgcggacacc
gtgacccagttcgacaacgtgcggctctggctcggcaagaactacaagaagtacatacaa
gcagaaccaccaaccaacaagtccctgtccagcctggtggtgcagctgctccagtttcag
gaagaggtttttggcaaacatgtcagtaacgcgcctcttactaaactgccgatcaaatgt
ttcctagatttcaaagcaggaggatccctgtgccatattcttgcagctgcctacaaattc
aagagtgaccagggatggcggcgttacgatttccagaatccgtcacgcatggaccgcaat
gtggaaatgttcatgaccattgagaagtccttggtacagaacaattgcctgtctcgacct
aacattttcctgtgtccagaaattgagcccaaactgctagggaaattaaaagacattgtt
aagagacaccagggaactgtctctgaggataagagcaacgcctcccatgttgtgtatcct
gtcccagggaacctagaagaagaggaatgggtacggccagtcatgaagagggataagcaa
gttcttctgcactggggctactatcctgacagctacgacacgtggatcccagcgagtgaa
atcgaagcatctgtggaggatgctcccacccctgagaagcctaggaaggtccacgcgaag
tggatccttgacaccgacacgttcaatgagtggatgaatgaggaagactatgaagtcagt
gatgacaaaagtccagtctcccgcaggaagaagatctccgccaaaacactgacggatgag
gtcaacagtccggattcagacagacgggacaagaagggagggaactataagaagaggaag
cgctctccctctccttcgcccaccccagaggctaagaagaaaaatgctaagaaaggaccc
tcgacaccttacaccaagtcaaagagaggccacagagaagaggagcaagaagacctgaca
aaagacatggacgagccctctccagtccccaatgtggaagaagtgacactccccaaaaca
gtcaacactaaaaaggactccgagtcagcccccgtcaaaggtggcaccatgactgacctg
gatgaacaggatgacgaaagcatggagaccaccggcaaggacgaggatgagaacagcaca
ggcaacaaaggggagcagaccaagaacccagacctgcacgaggacaacgtgacggagcag
acccaccacatcatcatccccagctatgctgcctggttcgactacaacagcgtccatgcc
attgaacggagggctcttcctgagttcttcaacggcaagaacaagtccaagactccagag
atctacctggcatatcggaacttcatgattgacacgtaccggctgaatccccaggagtat
ctaacatccactgcctgtcggcggaacttggcgggtgatgtctgtgctatcatgagggtc
catgccttcctggaacagtggggtcttattaactaccaggtagatgctgagagtcggccg
acccccatgggacctccacccacctctcacttccacgtcttagcagacacaccatcgggc
ctggttcctcttcagccgaagcccccacagggccgccaggttgatgctgataccaaggct
gggcggaagggcaaagagctggatgacctggtgccagagacggctaagggcaagccagag
ctgcagaactctgcttcccagcaaatgctgagcttccctgataaaggcaaggagaaacca
acagacatgcagaactttgggctgcgcacagacatgtacacaaagaagaatgtcccctcc
aagagtaaagctgcagcgagtgccactcgggagtggacggagcaggagacactgctgctc
ctggaggccctagagatgtacaaggacgactggaacaaagtgtctgagcacgtgggaagc
cgcacgcaggacgagtgcatcttacatttccttcgcctgcccattgaagacccgtacctg
gaggactcggaggcctctctcggccctctggcctaccaacccatccccttcagtcagtca
ggcaaccctgttatgagcactgttgccttcctggcctctgtcgtcgatccccgagttgcc
tctgctgctgcgaagtcagccctagaagagttctcaaagatgaaggaagaggtgcccacg
gccttggtggaagcgcacgtgcgcaaggtggaagaggcagccaaagtcacaggcaaggcc
gaccccgccttcggtctggagagcagcggcatcgcggggaccgcctctgacgagcctgag
cgcattgaggaaagcgggactgaggaggcacgggcagagggccaggcagtggatgagaag
aaggagcctaaggaacctcgggaaggagggggcgctgtggaagaagaagcaaaggaggaa
ataagtgagggtcccaagaaagatgaagagaaagggaaagacggtgacagcgagaaggag
tctgagaagagtgacggggacccgatagttgatcctgagaaagacaaggagccaacggaa
gggcaggaggaagtgctgaaggaagtggcggagccagagggggagaggaaaaccaaggtg
gagcgtgacattggtgaaggcaacctgtccacagctgccgccgcagccctggccgctgct
gcagtcaaggccaagcacttggctgcagttgaggagaggaagatcaagtctctggtagct
ctgctggtagagacgcaaatgaagaaactagagatcaaactccgacattttgaggagctg
gagacaataatggaccgggagcgagaggcgctggagtatcagaggcagcagctcctggcc
gaccgccaagccttccacatggagcagctcaagtacgcggagatgagagcccggcagcag
cacttccagcacatgcagcagcagcagcagcagcagcagcccgccctgcccccaggctcc
cagcccatgccccccacgggggccgccggaccacctgcagttcatggtctagcggtgcct
ccagccgctgtggcctctgctcctcctggcactggggccccccctggaagcttgggccct
tctgaacagatcgggccggcagggacaactgcagggccacagcagccacaacctggagcc
cctcagcctggggcagtcccaccaggggtacccccccctggaccccatggcccctcaccg
ttccccaaccaacaaactcctccctcaatgatgccaggggcagtgccaggcagcgggcac
ccaggcgtggcgggtaatgctcctttgggtttgccttttggcatgccgcctcctcctgct
gctccatccgtcatcccattcggtagtctagctgactccattagtattaaccttccccct
cctcctaacctgcatgggcatcaccaccatctcccgtttgccccgggcactatcccccca
cctaacctgcctgtgtccatggcgaaccctctacatcctaacctgccggcgaccaccacc
atgccatcttccttgcctctcgggccggggctcggatccgccgcagcccagagccctgcc
attgtggcagcagttcagggcaacctcctgcccagtgccagcccactgccagacccaggc
accccgctgcctccagaccccacggccccgagcccaggcacagtcacccctgtgccacct
ccacagtga
DBGET
integrated database retrieval system
