Apodemus sylvaticus (European woodmouse): 127670783
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Entry
127670783 CDS
T10613
Symbol
Cfap54
Name
(RefSeq) cilia- and flagella-associated protein 54 isoform X1
KO
K25553
cilia- and flagella-associated protein 54
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
asyl03037
]
127670783 (Cfap54)
Cilium and associated proteins [BR:
asyl03037
]
Motile cilia and associated proteins
Sperm associated proteins
127670783 (Cfap54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFAP54_N
DUF7050
Motif
Other DBs
NCBI-GeneID:
127670783
NCBI-ProteinID:
XP_052021251
LinkDB
All DBs
Position
20:42153157..42454695
Genome browser
AA seq
3179 aa
AA seq
DB search
MASSSASSSSSEVSPDSETSVSPVQLPPTPPPTSTAVLKSPSESKSSSTNPPHWTCSEDS
LPTAAFYGPLDSKNPLLASCEKEIRELLAFMKKNKALATAEERKHEFHRRCATTLFNIWT
KYAPRLPTDYYNEKLLKVGDSLCQIKEYKLALLQCYGRYLQEFTAGFDEHKEDVNQFKTV
FFPKGFGDETARLTFHALSGKNICNYQLVCENDANLRNEESVRQCLQILSSFRLIMQVAL
PQEHLCWIIFNGTLYIYTICRKLMIIGQSSKALEFLLWASMCMESSVPLLSVRYLTWRAT
LYTAVCQCHYDCQAGIHGEAFARRALAKIDELRQLELMSSSASLETSRKYYREATIKMAV
MIFKRGVFESRRKNKNVFRPKIRLNLKEAQSLPWPRTVTERLLDELLDSTSSRFLAVLEA
LSDSNRRILQTGPLVTDEMELRDVVSELFMAGKELLILSNVGPNGKLDFPQTSLLEHVIE
RKNIISVGASVKFAKLAFTYEEWGLFDSLAGQLIQFLQKQTSPEAKKAEKDLILLLAVEP
LINVKKSRGLIFPVDTDKEIQSVQSYLKHIACHESCVRTTFSEDIFSLASILHFCVCVPS
KGVQPDKDIIVDILALLWQRCKIGIQRLNIPKNDFAKYSHKISTNKWVYLLWQISEVMHC
YKLEDLDTVMVAEITLRLSEILESLGNPKRKFKKSADLSPKKGPDEPPGTSKGAPEILPI
LKRTPVEQLFYAYELLDKAITGMNWNCMLTTLSDGSSVIDHCYVKDSHDVDGDTYKPISS
NSYTMDLHLELIQAQHRIAVVLLDQLEVLQTPTVSTNTSAKGWEKLKKPRSSECFSELTV
MKKIKKNKLSKAIYLMQKALLLFEKDSVCETSRNLLMEAYALIEKVEAEQNALYSYQKYS
ESSKIKKSRIPPPPILLARTHCSVTLKPAPFISDVKASWYCILGCKAQGSYGKVRLNSTQ
LPSSGESIPADGRGFFEIKGLETNANYIFAIAAYSASGKLIGDAIGETTKPILIYPPLSA
VTARMYLTQVAYQIGNYEMAKKVFSPVWDYFVAAPLQDEQSVICLSNIMTITQRRFHSNI
LADTSSILLYLFLRNIFVMSDIKIKEENLFCDNIKGNEIFPAQQVARLVECENVLVALEL
SNFLNDANFALQAVTQCYGLLAPIIYHNIVLVPVIQILIKCIVVLQGIPSIIHSKKNISS
FESIQHMIACCIFYMTKILRSWKEYDLAIMLINYGKKMLDITSGCKSLFGIDQEETTEEG
TCCKKTSKTRKPQQVLLPEKINEQLTLLETHLLKMTKQVTSTELSGSEDPIFLYPVVLNW
TVKGAMKEVMKFKQRPRFLEFFTQIMLKCMNDEKFHLMVEISAPVYDFLKRRNESLIGVK
RIRYKENVICRKTLKSPRKFKAIVIEIGRSSDLPRRRRKKKETLKDFFYKNPSIFDMAEL
ERNKRTDVRKMAYRSLNDNLNPLILTYVKRKRFHQILLEELPWRAQMNLYLANAHYHLFL
QKLSERTKATRLSSSHSSVSFRSCDPNLFSLFHSGTVLPTAKLTVDSYKAMTDALNVSKK
KKYNQPTDIEDLSVLFSSKSEDNVPKIKTQTIYESESQLGIGVNIKEKDRMLLWGLDHFM
KIFSCCRRAMVLAYRGGYWTLLQNCCRVFWNFFRELQILLKQTVDSCKTFPISQDNFLCI
CVLPFYLGAELLIDMLIKLQNTNSIKPFEEKGEFSTPSCYGNIKSDNGGSSLIFEHPLDD
VNVVDLRWIHDFVLKSLEVLYQVEKWETLVSVAIQFNIISHERYTEQVTPLLVYAQRQLV
QRIKQLDGPDLSRQACARYQAENGEKITCRNFIGKQLKIDHSTPKNLAEIEGSSDPLKSL
ITSEHKQAKQIVSVPLDVNDTLRCFRETLEKSKYHNRSVRHSRKLLSLFLAQTQDERGGI
NTSKLTPGKVEFCLGTEEMHMPTPPDLSQENFRVFSSVEKSKLPFSQLGLVISSYYQTID
VLQASNQRSLKVQTLHSLGSLLIFADKKRAAFKCWSQALDDIFRKPDVLHNWKEFGTSLP
SATSSSSPPGFKDYSEEFLSKFGIWGCLQGAVISAKIAQFIKTANVKKRINCCILSALLF
QSLLRTTLPHPKAERSYAQYEITQLLPGIELFSDKFRADICSVIASLYYVIRELHYAKYN
LIVLPLLALYQYFVSVICQDIVRNLEARLLKIEVLIDLGFFSEAFYELSQIYHGKNMPCA
IPAGYKATTKIKITQSFDSGKPLTSKDNMQALEELINKGLPHVLVTLGYQHLLNKFNFVK
SHFFISLAATINCIPDTSPKIIYYPVVIDKSKPTAQNLKDFYAKDNENSHGQLLRFRDEY
TLNTIKSILLLEAEEKINGLLSETEHQCHRPLYLSSVAELEIMVEARLHLAAIALQRYRP
AYSTAIMYSTLKLLQDSKVFQKKQPEEPCSPTSPETSTSESKDDSEFLDPISLNSREYFN
IHLWLRCRLMLVTAFIAQIRGIGLMKESELTDCLSLIDEVCTEAKSADDTEVLAEFLMQA
VILGLQEKHFKADIIRKLQEIISLLEGSEFLSPRSWLTLAKSLILMDDLTKAEKFKKASS
KENKLIFLNQAHRILIAQMLTFGETIEFPLSDADYASPLQPLKNMYLPHVMLLAKIKLRI
GHSMAKQVYSGSKKKDIGKWLPVLHIFDMALKVCKATATEEYEVEAEILFQKGRIERQIL
MDEKSPIAHVESFFEAIQISLRNDQNTVLIRDSYLEIALVYFYLKKPKKKVSATALKVTP
LPRRHSSFKDPVATRFEMYSSLAWIAIRAAAQVSESVLGLNLLIGKKNARADKVNNITLP
NTPEFATVDLLSSYTDYLLENYQVVFQTSSTFMCHNEDVYDCIDGRKRNISKVDITWILL
IRYYIHLQRINNLSKLLASATPVSGISLPDDTLVTSLFNSELILRQKELHIFLKRFLQLY
SSSCIDGFPRELLQGLENVVALERVLFETSGKVHRDSSLQSDLSGKLAGSPSYTDISSEM
AVQALNKELCFQWYIPPLDKPPKDAEPMVLLLYAYNLKPLKISDIKVPTGNNLCVGTSWI
PLKRVIAIHEKLSNLAQIAQISLPSVPEVASEETIYETVEPDDKPIDTDLENMILECCSE
IAALFSSDKDKDKEPSPLTEIPFDVSLPAIFSLERLFDLANGCITSVGSLFNWVVSIIH
NT seq
9540 nt
NT seq
+upstream
nt +downstream
nt
atggcatcctccagcgcctcctccagctcgtctgaggtgtccccagactctgagacatcg
gtgtcgccggtgcaactgcccccaacgccgccgccgacctccaccgcggttctcaagtcg
cccagcgagtccaagtcgagctcgaccaacccgccgcactggacctgctccgaggactca
cttcccactgccgccttctacgggcccctggacagtaaaaacccgctcctggcctcttgc
gagaaggagatccgggagctgttggcctttatgaagaagaataaggctctagccaccgca
gaggaacggaagcacgaattccatcggaggtgtgccaccactctgtttaatatctggacc
aaatacgcccccaggctgccaaccgactattacaacgagaagcttctgaaggttggagac
agcctctgtcaaataaaagaatacaagctggctcttttgcagtgctatgggcgatatctc
caggagttcactgctggtttcgacgagcacaaagaagacgtcaatcagttcaaaactgtc
ttcttccccaaaggcttcggagatgaaacagctagacttacatttcatgctttgagtgga
aaaaatatttgcaactaccagctggtctgtgaaaatgatgccaacctgcggaacgaagaa
tccgtgagacagtgtctgcaaatcttgtcttcctttagactcatcatgcaggtggcactc
cctcaggagcacctttgctggatcatcttcaacggtaccctttacatctacaccatttgc
cggaagctgatgatcataggacagtcttccaaggccttagagttcctgctgtgggccagc
atgtgcatggaatcctctgtcccgctcctgtccgtcaggtacctgacgtggagagccact
ctctacacggccgtctgccagtgccactatgactgccaggctggcatccacggggaggca
tttgctcggcgtgcgttagctaaaattgatgagttaaggcaactggaattaatgagctct
tctgcttctctggaaacctcccgaaaatattacagagaggccacgataaagatggccgtg
atgatcttcaaaagaggagtatttgagtctaggagaaaaaacaaaaacgtgtttagaccg
aagataagactcaacctaaaggaagctcaaagcttgccctggccacggacggtcaccgaa
cggctgctggatgaactacttgacagcacctcgtcccggtttctggctgtcttggaagcc
ctctctgactcaaacaggcggatcctgcagaccgggccgctggttactgacgaaatggag
ttacgtgatgttgtgtcggagctgtttatggccggaaaagaacttttgatactttcaaat
gttggtccaaatggaaaacttgatttcccccaaacaagtctcctggagcatgtaatagaa
aggaaaaatattatttctgtgggcgcttctgtgaagtttgccaaattggcttttacttat
gaagaatggggattattcgactctctcgctggacaacttattcagtttctccagaagcag
accagccccgaggcaaagaaagcagagaaggatttaattcttctgcttgccgtagagcca
ttgatcaatgtgaagaaaagcagaggcttgatctttcctgtggatacggataaggagatc
cagtccgttcaaagttatctaaaacacatagcttgtcacgagtcttgtgtgaggaccaca
ttctcggaagatatttttagcttggcatcaattcttcacttctgtgtctgtgtccctagc
aagggcgttcagccggataaggatatcattgtggacatactagcactcttatggcagaga
tgcaagataggaattcagaggctcaacatacccaaaaacgactttgcaaaatattctcac
aagatcagcaccaacaaatgggtctatctcctgtggcagataagcgaggtaatgcactgc
tataaactggaagacctggacaccgtgatggtggcagagatcaccttacggttaagtgaa
atactagagtctttgggaaacccgaaaagaaaattcaaaaaatctgcagatttgtctcca
aagaaagggccagatgagccgcctggaacttcaaaaggggccccggaaatccttccaata
ttaaagcgaacaccggtggaacagctgttttatgcgtatgaactccttgataaagcgatc
actggcatgaactggaactgcatgttaactactctgtcggacggatcatctgtaattgac
cattgctatgtcaaggactctcatgacgtagacggagacacgtacaagcccatctcatca
aacagctacacgatggacctgcaccttgagttaatccaagctcagcaccgcattgctgtt
gtgctcctcgaccaactggaagttttgcagactccgactgttagcacgaacacttctgcc
aaaggctgggaaaaattaaagaagcccagaagctccgagtgtttctcagagttaactgtg
atgaagaaaataaagaagaacaagctgtccaaagccatctacctgatgcagaaggctctt
ttactgtttgagaaagactcagtgtgtgagacttcacggaacttgttgatggaagcgtat
gccttaattgagaaggtcgaagcagaacaaaacgccctatattcctatcagaagtactcg
gagagttcaaaaataaagaagagcagaatccctcccccacccatcctgctggcccgaact
cactgctctgtgactctgaagcctgcgcccttcatatcagatgttaaggcatcctggtac
tgcattttgggttgcaaagcacaagggagctatgggaaagtgaggctgaacagtacccag
ctccccagctcaggcgaatcgataccagctgatggcagaggcttctttgaaattaaaggg
ttggaaacgaatgcaaactacatttttgcgatcgctgcttactcggccagcgggaagctc
attggtgatgctattggagagacgacaaaaccaattctcatttacccgcctctctctgct
gtcactgctcggatgtacctgacacaggtcgcgtatcagatcggtaactatgagatggcc
aagaaagtcttctcaccagtctgggattatttcgttgccgcaccgctacaggacgagcag
tcggttatctgtctaagcaacatcatgacaataacgcagagaaggtttcattccaacatc
ttggcagacacttcttcaatcctcttataccttttcctcagaaatatctttgtgatgagt
gacattaaaatcaaagaagagaatctcttctgtgataatattaaaggcaacgagattttc
cccgcccagcaggttgccagactggtggaatgtgagaacgtgcttgtggccctggagctc
agtaacttcctcaatgatgccaacttcgccctccaggccgtgacccagtgctacgggctc
ctcgcgcccattatttaccacaatatcgtactggttcctgtcatccagatcttgataaaa
tgtattgtggttttgcaaggaataccaagtattattcactccaagaaaaatatttcaagc
tttgaaagtatacagcacatgatagcttgctgcatcttctacatgacaaagattctacgt
tcctggaaggaatatgacctggcaataatgcttataaattatgggaaaaagatgttggat
atcacatcagggtgcaagtctctttttggtattgaccaagaagaaactacagaggagggc
acttgttgtaagaaaacttcaaaaaccaggaagccacagcaggtgctgctgcccgagaag
ataaacgagcagctgacattgttggagacacatctactcaaaatgacaaagcaagttacc
tcaacggaactatctggatccgaggacccgatcttcctttaccctgtggttttaaactgg
acggtgaagggcgcgatgaaggaagtcatgaaatttaagcaaagaccgagattcctggaa
ttctttacccaaattatgctcaaatgcatgaacgatgagaagtttcacctcatggtggag
atatctgcccccgtttatgacttcttgaaaaggagaaatgagtcccttattggagtgaaa
aggataagatataaggagaatgtcatttgtaggaagacactcaaatctcccaggaaattt
aaagccattgtgatcgagatagggaggagttcagacttaccaagaaggcgaaggaagaaa
aaggaaactctaaaagactttttctacaagaatccgtccatttttgacatggcagagctg
gaaagaaacaagagaaccgatgttaggaaaatggcctatcgaagcctgaatgataacttg
aaccccttaatcttaacttacgttaaaaggaagaggttccatcaaatacttcttgaggag
ctgccttggagagctcagatgaacctgtatctggcaaacgcacactaccatttgttttta
caaaagctgtctgagcgcacaaaggcgacgagactcagttcttcgcattccagtgtcagt
ttccggtcatgtgatcctaacctcttctcactgttccactctggaacagtgttaccaaca
gcaaagctgactgtagacagctacaaagcaatgacagatgcccttaatgtctctaagaaa
aagaagtataaccaacccacagatatagaagatttatctgtacttttcagttccaaaagt
gaggataacgttcccaagataaaaacacagacaatttatgaatcagaatctcaattaggc
attggtgttaatattaaagagaaggatcgaatgctgctttggggcctggatcattttatg
aaaatcttctcgtgttgcaggagagcaatggttcttgcttaccgcggtggctattggact
ctactgcagaactgttgcagggtcttctggaactttttccgggagctgcaaatactactg
aagcagactgtggatagttgcaaaacttttcctattagccaggacaactttctctgtatc
tgtgtgttaccgttctacctgggcgcagaactacttattgacatgttgataaagctgcag
aacaccaattctatcaagccgttcgaagagaaaggcgagttcagcactcctagctgttac
gggaacatcaaatctgataatggaggttccagcctgatttttgaacatcctttggatgat
gtcaacgtggtagatttgagatggatccacgactttgtgttgaagtctttggaggtttta
taccaagtagagaagtgggagacgctggtgtctgttgccattcagttcaacatcatttca
catgagaggtacacagagcaagtgacaccgctgttggtttatgctcagcgccaactggtc
cagaggatcaaacagctggatggccccgatctctcccgacaggcttgtgccagataccag
gctgaaaatggagagaagatcacctgtcgaaacttcatcgggaagcagctcaagattgat
cattccacacccaagaacctggctgagatagaaggcagctctgaccccctgaagtcactc
atcacttcagagcataaacaagccaaacagattgtctctgtgcccctggatgtgaacgac
actttgagatgcttcagagagaccctggaaaagtccaaatatcacaacagatcggtccga
cacagcagaaagctgctttctttatttcttgcacagacacaagatgaaagaggagggata
aatacttcaaaattaacgccagggaaggtggagttttgcctgggaacggaagagatgcac
atgccaacaccccccgacctttctcaagaaaacttcagagtttttagctcagtggagaaa
agcaaacttcccttctcacagctggggctggtcatttcttcctactatcaaactattgat
gttctccaagccagcaatcaaaggagccttaaagttcagacgctgcattccctcggaagc
ctcctcatctttgcagataagaaaagggctgcttttaaatgttggagccaagctcttgac
gacatctttagaaaaccagacgtgctgcacaactggaaagaatttggcacctcccttccc
agtgccaccagcagttcctcacctcctggtttcaaagactacagtgaagaatttctatca
aaatttggcatctggggctgtttgcaaggggcagtgatctcagcgaagatagcgcagttt
attaagaccgcgaatgttaagaaaagaatcaactgctgtatattgtctgcgttgcttttt
cagagtctgcttcgtaccacactcccacatcccaaagctgaacggagctatgctcagtac
gaaatcacgcagctcctccccggcatcgagctcttctcggacaaattcagggctgacatc
tgcagtgttatcgcaagcctgtactacgtcatccgcgagctgcactacgctaagtacaat
ctcatagttctgcctcttcttgcactgtaccaatattttgtgtctgtcatttgccaagac
atagtgagaaatctagaggcaagactcctcaagatcgaagtccttatagatttaggcttc
ttttccgaagccttttatgagctatcccagatttatcatggaaaaaacatgccatgcgcc
atacctgctggctataaagcaacgacgaaaattaagataactcaatcattcgattctgga
aaacctctcaccagtaaggacaacatgcaggcacttgaagagctaataaacaaaggcttg
ccccacgttctggttactcttggctaccagcatctcttaaataaatttaattttgtcaag
tcacactttttcataagtttggctgcaacgataaactgtatccctgatacttcaccaaaa
ataatatactaccccgttgttattgacaagagcaaacccaccgcccaaaacctaaaagat
ttttatgcaaaagataatgaaaactctcatggtcagcttttgagatttagagatgaatac
acacttaacaccatcaagtccattttgctgctggaggctgaggaaaagatcaacggcctg
ttgtctgagacagagcaccagtgccacaggcccctctatctgtcctctgttgcagagctg
gagatcatggtggaggccagactgcacctggcagcaattgccctgcagagataccggcca
gcatacagcactgctataatgtattccacgctgaaacttctccaggactcaaaggtgttt
caaaagaaacagcctgaagaaccatgcagccccacctctccagaaacttctacctcagaa
agtaaagacgacagtgagtttttggaccccatttccctgaactcccgggaatacttcaat
attcacctttggctgaggtgccgcttgatgctggtaactgcgttcattgcacagattcgt
gggattggactcatgaaagagagtgagctgacagactgtctgagccttatcgacgaagtc
tgcacggaggcaaagagtgctgatgacactgaggtcctggctgagttcctaatgcaggcc
gtgatcctgggccttcaggaaaagcattttaaagcagacatcatcagaaagctccaggaa
attatcagtttgctggaagggagtgagttcctttctcccagatcctggttaaccctggca
aaaagcctcattctgatggacgacttaacgaaagctgagaaattcaagaaagcatcttca
aaagagaacaaattaattttcttgaatcaagctcacagaattctgattgcacagatgtta
acttttggagagacaattgaattccccctctcagatgctgactatgcaagcccattacag
ccactgaagaatatgtatcttcctcatgtcatgttactggccaaaataaaactgagaatt
ggacacagcatggccaagcaggtatattccggcagcaagaagaaggacattggtaagtgg
ctgcctgttcttcacatctttgacatggctttgaaggtctgtaaggcaactgcaacagag
gaatatgaagtggaggctgaaattctgtttcagaaaggcagaatagagcgtcaaatactg
atggacgagaaatctccaatcgcacacgtagagagttttttcgaagctattcaaataagc
ctgaggaatgatcagaacacagtgttgataagggattcctacctcgaaattgccctggtg
tatttctatctgaagaagccaaagaagaaggtttcagccacagccctcaaggtaacacct
cttcccagaaggcatagttcttttaaagatccagtagcaactcgatttgagatgtacagc
tcactggcctggattgcaatacgagctgctgcacaggtcagtgaatctgtgctggggctc
aacctcctgataggaaagaagaatgccagggctgacaaagtcaacaacatcacactgccg
aacacgccagagtttgccaccgtggatcttctctcgtcctatacagattatttactcgaa
aactaccaagttgttttccagacttccagtacttttatgtgccacaatgaagatgtgtat
gactgtatagacggcagaaagaggaatatctccaaagtggacattacgtggatccttctc
attcgctactatatccacctacaaagaatcaacaacttgagcaagctgctagcatctgca
actccagtctcagggatttctttgcccgatgacacgctcgtcacatccctgttcaactct
gaactgattttgcgccaaaaagaattgcatattttcctgaaaagattcttacagctctac
tcttcttcgtgcattgatgggtttccgagggaacttcttcaaggtttggaaaacgtcgtt
gcgctagagagagttctgttcgaaacatcaggcaaggttcatcgggacagttccctgcag
tctgatttgtctggaaagctcgctggcagcccatcttatacagacatctcatcagaaatg
gcggtgcaagctttgaacaaagaactttgctttcagtggtatatccctcccctggacaaa
cctccaaaggatgcggaacctatggttttattattgtatgcgtataacctgaagcccctg
aagatttcagatattaaagtgcctactggtaacaacctgtgtgtcggcacctcctggatt
ccactgaagagagtcattgcgattcacgagaaactatctaatcttgcacaaatagcccag
atatccttgccatcggttcctgaagttgcttcagaggaaactatctatgaaacagtagaa
cctgacgataaaccaattgatacagacctggaaaacatgatcctagaatgttgctctgaa
atagcagctctgttttccagcgacaaagacaaagacaaagagccctctccactgactgag
attccatttgacgtctccctgcctgctatattcagccttgagagactttttgatcttgca
aatggttgtatcacatcagtaggaagccttttcaactgggtggtatcaattattcactga
DBGET
integrated database retrieval system
