Apodemus sylvaticus (European woodmouse): 127671050
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Entry
127671050 CDS
T10613
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36-like
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl03440
Homologous recombination
asyl04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127671050
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
127671050
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
asyl01002
]
127671050
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
asyl04121
]
127671050
03036 Chromosome and associated proteins [BR:
asyl03036
]
127671050
03400 DNA repair and recombination proteins [BR:
asyl03400
]
127671050
Peptidases and inhibitors [BR:
asyl01002
]
Metallo peptidases
Family M67
127671050
Ubiquitin system [BR:
asyl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
127671050
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
127671050
BRISC complex
127671050
Chromosome and associated proteins [BR:
asyl03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
127671050
DNA repair and recombination proteins [BR:
asyl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
127671050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
Suppressor_APC
Motif
Other DBs
NCBI-GeneID:
127671050
NCBI-ProteinID:
XP_052021678
LinkDB
All DBs
Position
20:25654270..25655145
Genome browser
AA seq
291 aa
AA seq
DB search
MAVRTMQRVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGQLNVHGRSDSKLAYAGAEMR
TVVNKMEAVRIVHIHSVIILRRSDKTKDRVEISPEQLSAASIEAERLAEQTGRPMRVVGW
YHSHPHITVWPSHVDVRTQAMYQMMDQSFVGLIFACFIEDKPTKIGRVLYTCFQSVQASK
SSEYERLEIPVHIVPHTTIGKVCLRSAVELPGILCQEEQDAYKRIHSLTHLDSVTKIHNG
SVFTKHLCSQMSAVCGPLLQWLEDRLEQNQQRLQELEQEKEALMEELSSLE
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaccatgcagagagtgcaggcggttcaccttgaatcggacgctttcctg
gtttgtctcaatcacgctctgagcacagagaaggaggaggtgatgggtctgtgtataggg
cagttgaatgttcacgggaggagtgactccaagcttgcatacgctggagctgaaatgcgc
acagtcgtgaacaagatggaggccgtcagaattgttcacattcattctgtcattatcttg
cgacgttctgacaagacaaaggaccgggtagaaatttctccggagcaactgtctgcagcc
tcaatagaggcagaaaggttagcggagcaaacaggtcgtcccatgagagttgttggctgg
taccattcccaccctcatataactgtttggccgtctcacgtcgatgtacgtacgcaggcc
atgtatcagatgatggatcaaagctttgtaggactgatttttgcttgtttcatagaagac
aaacccacaaagattggccgggtactctatacttgcttccagtctgtacaggcatcaaag
agttcagaatatgagagacttgagatcccagtccacattgtacctcataccaccattggg
aaagtgtgcctcaggtcagcagtggagctgccggggatcctatgccaggaagaacaagat
gcgtataagaggattcacagccttacacatctggactcagtgaccaagatccataatggc
tctgtattcaccaagcatctgtgcagtcagatgtccgcggtctgtgggcctctcctacaa
tggttggaggacagactagagcaaaaccagcagcgtttgcaggagttggaacaagaaaag
gaagcccttatggaagagctgtcttccctagaataa
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