Apodemus sylvaticus (European woodmouse): 127671339
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Entry
127671339 CDS
T10613
Symbol
Utp20
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
asyl03009
]
127671339 (Utp20)
Ribosome biogenesis [BR:
asyl03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
127671339 (Utp20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Motif
Other DBs
NCBI-GeneID:
127671339
NCBI-ProteinID:
XP_052022007
LinkDB
All DBs
Position
20:46540515..46622367
Genome browser
AA seq
2788 aa
AA seq
DB search
MKPKPLSHKTENTYRFLTFAERLGNVNIDIIHRIDRTASYDEDVETYFFEALLKWRELNL
TEHFGKFYKEVIDKCQSFNQLVYHQNEIVQSLKTHLQIRNSFAYQPLLDLVVQLARDLQT
DFYPHFEDFFVTITSILETQDTELLEWAFTSLSYLYKYLWRLMVKDMPKIYSLYSTLLAH
KKLHIRNFAAESFTFLMRKVSDKNALFNLMFLDLNEHPEKVEGVGQLLFEMCKGVRNMFH
SCTGQALKLLLQKLGPVTETKTQLPWILVGETLKTMAKSTVVYIYKEHFGVFFDCLQESL
LELHNKVTEANCCENSEQMRRLLETYLIVVKHGSGSKITRPGDVCRALSEPLHTANLSTP
CRKTLLDVVSALLLAENVSLPETLIKETIEKVFESKFERHLILDFSEVMFAMKQFEQLFL
PSFLLYIENCFLMDNSVVSDEALTILAKLILNKAAPPTAGSMAIEKYPLVFSQQTVGSYL
KQRKADSKRRKEQFPVLNHLLSIVQLPPNKDATHLSQSWAALVVLPHLRPLEKEKMISVV
SCFIESLFLAVDRGSFGKGHLFVLCQAVNTLLSLEESPELLHLVPVERVKHLVLTFPTEP
SVLLLADLYYQRLALRGCKGPLSEEALMELFPKLQANISTGVSKIRLLTIRILNHFDVRL
PVSVEDDGLSERQSAFAILRQAELVPATVSDYREKLLHLRKLRHDVVQGAVPQGPLQEVP
LRYLLGMLYVNFSALWDPVIELISSHAHGMENKQFWNVCYEHLEKAASHAEKELQKDVRD
DESMGEESWEQAPDGAVGALYQQQLALKTDCRERLDHTNFRFLLWRALAKFPERVEPRSR
ELSPLFLRFINNEYYPADLQVAPTQDLRRKGRGAVAEEAEEEPAAGEDEELEEEAVPTDE
TPQKKKTRRAAAKQLIAHLQVFSKFSNPRALYLESKLYELYLQLLLHQDQAVQKIALDCI
MTYRHPHILPYRENLQRLLEDRSFKEEIVHFSISEDSTVVKAAHRADLFPILMRILFGRM
KNKTGSKTQGKSASGTRMAIVLRFLAGTQPEEIQLFLDLLSEPVKHFKNGDCCSAVIQAV
EDLDVSKVLPVGRQHGVLNSLEVVLKNISHLISAYLPKILQILLCMTAAISHILDQREKI
QLRFINPLKNLRRLGIKMVSDIFLDWETYQFRAEEIDAVFHGTVWPQICRLGSESQYSPT
PLLKLISIWSRNARYFPLLAKQKPGHPECDILTNVFAVLSAKNLSDATASIIMDIVNDLL
NLPDFEPTEAVPSLPVTGCVYADVVENSEPITVGGRLILPHVPAILQYLSKTTINTEKVK
KKKNRAQVSKELGLLSKISKFMKDREQCSLLITLLLPFLLRGSIAQDTELDILVTVQNLL
QHCLDPTHFLRPLAKLFSVIKNKLSRQLLCTVFQSLSDFESGLKYITDIAKLNAFDKRHL
DDINFDVRFSAFQTITSNIKAMQRVDVDYLIAVMHNCFYNMEIGDMSLSDNASICLTSVI
KRLAALNVTEKEYKEIIHRTLLEKLRKGLKSQAESVQHDYTLILSCLIQTFPNQLEFKDL
VQLTHSHDPEMDFFENMKHIQIHRRARALKKLAKQLLEGQVVLSSKSLQNYIMPYAMAPI
LDEKMLKHENIITAATEVIGAICRHLSWPAYVYYLKHFIHVLQSGQINQKLAVSLLVIVL
EAFHFDYKTLEEQMGNLKSEQNTVEMAEILEHEAMEVEDMDEEEKEQGPERLPDSKEPLE
GPKAAASEGTAAPEQERIPKSVSFLPRNKEELERTIQTIQGAITGDILPRLHKCLASATK
REEEHKLVKSKVVNDEEVVRVPLAFAMVKLMRSLPQEVMEANLPSILLKVCVLLKNRAQE
IRDIARSTLSKIIEDLGVHFLQYILKELQTTLVRGYQVHVLTFTVYTLLQGLASKLQVGD
LDCCLPIMTEIFNHELFGALAEEKEVKQILSKVMEARRSKSYDSYEILGKFVGKEQVTKL
ILPLKEILQNTMSLKLARKVHETLRRIIAGLIVNPGMTADALLLLSYGLVSENLPLLTEK
EKKPAAPVPDARLPPQSCLLLPETPVRGGPKAVVSKKTNMHIFIESGLRLLHLSLKTSKI
KSSSEHVLEMLDPFVSVLISCLGAQDVKVITGALQCLIWVLRFPLPSIATKAEQLTKHLF
LLLKNYARVGAARGQNFHLVVNCFKCVTIVVKKVKSHQITEKQLQVLLAYAEEDIYDTSR
QATAFSLLKAILSRKLLVPEIDDIMRKVSKLAISAQNEPARVQCRQVFLKYILDYPLGEK
LRPNLEFMLAQLNYEHETGRESTLEMIAYLFETFPQGLLHEHCGMFFIPLCLMMVNDDSA
MCKRMASMAVKSLLGKVSQEKRDWLFALVTSWLEAKKRLNRQLAALACGLFVESEGVDFE
RRLRTLLPVIEKEIDPENFKDIIEETEEKAADRLLFGFLTLISKLIKECNIIHFTKPSET
LSKIWSHVHSHLRHPHSWVWLTAAQIFGLLFASCQPEELIQKWKGRKTKKKTSDPIAVRF
LTSDLGQKMKSLSLASYHQLHSKFLDESLGEQVIKNLLFIAKVLYLLELESGNTQGEVND
SEEQDTLGDALAREAAEEKAGAHGKTESNREQTEERSKPATLMWLIQKLSRMAKLEAAYS
PRNPLKRTCVFKFLGAVAVDLGVDRVKPYLPVIIAPLFRELNSTYSEQDPVLKNLSQEII
ELLKKLVGLESFSLAFASVQKQASEKRALRKKRKALEFVTNPDIAVKKKLKKHKNKSEAK
KRKIEFLRPGYKAKRQKSHSLRDLATVE
NT seq
8367 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaaagccactttcccacaagaccgagaacacctaccggtttcttacatttgcg
gaaagactggggaatgtgaacattgatattattcaccgcatcgatagaactgcaagctat
gacgaggacgttgagacttacttcttcgaggctctgctgaagtggagagagctgaacctt
acggagcatttcgggaaattttacaaagaagtcattgacaaatgtcagtcttttaaccag
ttggtctatcatcaaaatgaaatcgttcagagcttgaagactcacctgcaaattaggaac
agttttgcctaccaacctcttttggatttagtagtacagttggcccgagatctgcagact
gatttctacccccactttgaagacttcttcgtgacaatcacgtccatcctggagactcag
gacacggaactgctagaatgggctttcacctcgctctcgtacctttacaaatacctgtgg
agactgatggtgaaggacatgcccaagatctacagcttgtatagtaccctcttggctcat
aaaaaactacatataagaaactttgctgctgaaagttttactttcttgatgagaaaggtc
tctgataaaaatgcacttttcaatttaatgtttcttgatcttaatgaacatccagaaaaa
gtggaaggagttggacagctgctctttgaaatgtgcaagggagtcagaaatatgtttcat
tcctgcacgggccaggcactgaagctccttctgcaaaagctaggaccagtcaccgaaaca
aagactcaactaccgtggattttagttggggagaccctaaaaaccatggccaaatccact
gtagtatatatctataaggaacattttggtgtgttttttgactgtttgcaagagtcactc
ctggagctacacaacaaagtgacagaagccaactgctgtgaaaactctgaacagatgagg
cgcttgctggaaacatacctgatcgttgtgaaacacggaagcgggtccaagatcacacgg
cctggtgacgtgtgcagggcattgtcggaaccattacacacagccaatctttccacacct
tgccggaagactctcttggatgtagtttctgctttgctcctagctgagaatgtttccttg
ccagagacgctcatcaaagaaaccatagaaaaagtattcgaaagcaaatttgagagacat
ttgattttggatttttctgaagtcatgtttgctatgaagcagtttgagcagctgttcctg
ccgagctttctcttgtacattgagaattgcttcttgatggacaactctgtggtcagcgat
gaagcactgaccattttagccaagctcattctgaacaaagctgcccctcccacagccggt
tccatggccattgaaaaataccctctggttttctcccagcagacagtgggatcctactta
aagcagaggaaggccgactccaagagaagaaaggaacagtttccagtcttaaaccatctc
ttatccatagttcagttacccccaaataaagatgccacccacctttcacagtcttgggca
gcccttgtggtattacctcatcttagacctcttgagaaagagaagatgatatcggtcgtg
tcctgcttcatagagtcactcttcctggctgttgacagagggagctttggaaaaggacat
ttatttgttctttgtcaagctgtaaatactctactgagtttggaagagtctcctgaactt
cttcatctggttcctgtggagcgggtgaagcacttagtgctaacatttccaacggagcca
tctgtgttgctgttggctgatctctattatcagaggctagcgttacgtggatgcaagggg
ccactctccgaggaggctttaatggagttatttcccaagttacaagcaaacatctcaact
ggtgtctccaagattcgacttttgacaataaggatcctaaatcattttgacgtccgactt
ccagtttcagtggaggatgacgggctctcggaacggcagtcagcctttgctatattacgc
caggctgaacttgttccagcaactgtgagcgattacagagagaagcttctgcacctgaga
aagctgaggcacgatgtggtgcagggtgctgtccctcagggcccactacaggaggtgccg
ctccgttacctgttaggcatgctgtatgtcaacttcagtgccctctgggaccctgtcata
gagctcataagctctcatgcccacggaatggaaaacaagcaattctggaatgtctgctat
gaacatctggaaaaggcagcctcacatgctgagaaagaactgcagaaggatgtgagggac
gacgaatccatgggagaggaaagctgggagcaagccccggacggagccgttggcgctctc
taccagcagcagttggcactgaaaaccgactgtcgggagcgactggaccataccaacttc
cggttcttgctttggcgagctttggccaaattcccagagcgagtagagccacggtccagg
gaactctccccacttttcctaagattcatcaacaatgagtattatccagcagatctgcaa
gtcgctcctactcaggatctacgcagaaaaggccgaggagcggtagctgaggaggcagag
gaagagcctgctgctggagaggatgaggaactggaggaagaggccgtgcctacagatgaa
acgccccagaagaaaaagacgagaagggctgcagcaaagcagctcattgcccacttgcaa
gtcttctctaagttttcaaacccacgggccttatatctcgaatccaaattgtacgaattg
tatctccagttgttgctacaccaagatcaagccgtgcagaaaatagccttggattgcata
atgacctatagacatcctcatatcctcccttacagggaaaacttacaaaggctgctggaa
gacagaagctttaaggaagagatcgtgcatttcagcatctcagaagatagcactgtagtg
aaagcggcccaccgggcagatttgtttccaattctgatgagaatcttgtttgggcggatg
aagaataagacagggagtaaaacccagggcaaatctgcctcgggaacccgcatggccatt
gttttgcggttcctcgcggggacccaacctgaggagatccagttattcttagacctgctg
tctgaacctgtgaaacacttcaagaatggggactgctgttctgcagtcatccaggcagta
gaggatttggatgtgtctaaagttcttcccgtggggcgtcagcacggcgtcctgaatagc
ctggaggttgtgttgaagaacatcagtcatctcatcagtgcataccttcccaagatcctg
cagatcctgctgtgcatgacagcagccatctcccatatcctcgaccagcgggagaagata
cagctgaggtttattaacccactgaaaaatttaagacgtctgggaatcaagatggtcagc
gatatctttttggattgggaaacctatcagttcagagcagaagagattgatgctgtgttt
catggtacagtttggcctcagatctgcaggcttggatctgagagtcagtattcgcctact
cctctgttgaaactaattagcatctggagcagaaatgcaagatatttccctcttctggca
aaacagaaacctgggcacccagaatgtgatatcctgaccaatgtctttgcagttctctca
gcaaagaacctgtcggacgccacagctagcattataatggatatagtcaatgatctcctc
aaccttccagattttgagcccacagaagcagtgcctagcctgccggtaactggctgtgtg
tatgccgacgtagtcgaaaactcagagcctatcactgtaggagggagactgattctgccg
catgtgcctgcaattcttcagtatctcagcaaaaccacaataaacacagaaaaggtgaaa
aagaaaaagaacagggctcaagtcagtaaggagctcggccttctttccaagataagcaag
tttatgaaagacagagagcagtgttctctcctcatcacgctgctccttccgttcctcctc
cggggcagcattgctcaggacacagagcttgacatcctggtgacagtgcagaacctgtta
cagcactgtctggatcccacacacttcctcagacctctcgccaaactcttctccgtcatt
aagaacaagttgtcaagacagctgctctgcactgttttccagagtctgtctgattttgaa
agtggactaaaatatattacagatatcgcaaagcttaatgcctttgataaaagacatctg
gatgacatcaactttgacgttcgattctcagccttccagaccatcacctccaacataaag
gcgatgcagagggtggacgtggactacctcatcgccgtgatgcacaactgtttctataat
atggagataggagacatgtctttaagtgacaatgccagcatatgcttgacaagtgtcatc
aaaaggctagccgctctgaatgtcaccgagaaggaatataaggagatcattcaccggaca
ctcctggagaaactgaggaaggggctgaagagccaggcagagagcgttcaacatgactat
accctgatcctttcctgtttgattcaaacttttccaaaccaactggaatttaaggacctg
gtgcagctcactcattcccatgacccggagatggacttctttgagaacatgaagcacatc
cagatccacaggcgagcaagagccttgaagaaactggctaagcagctcctagaaggccag
gttgtgctgtcttctaaatctcttcagaattacatcatgccttatgccatggctccaatt
cttgatgagaaaatgctcaagcatgaaaacattatcactgctgccactgaggttatcgga
gccatttgcagacacctgtcctggccagcatatgtctattacttgaaacatttcatccat
gtcttgcagtcaggacaaatcaaccagaaactggctgtcagtttgctggtgatcgtgttg
gaagcattccattttgactacaaaactcttgaagaacaaatgggaaatcttaaaagtgaa
caaaacacagttgagatggctgagatactggagcatgaagccatggaagtggaggacatg
gatgaggaggagaaggaacaaggccctgagagactgccagacagcaaggagccactggaa
ggccccaaggcagctgcttctgaggggacagcagctccggagcaagagcgcatccccaag
tcagtctctttccttcctcggaacaaggaggagctggagagaaccattcaaaccatccag
ggagccatcactggggacatcctccccagactgcataagtgcctcgcgtctgcgaccaaa
agagaagaagagcacaagctggtcaagtcaaaggtcgtgaatgacgaggaggtggtccgt
gtgcccctggcctttgccatggtcaagctgatgcggtccctcccacaggaagttatggag
gccaacctgcccagtattttgctgaaagtgtgtgtcctcctgaagaacagagcacaggaa
atcagagacattgcacgcagcactctctccaaaataatcgaagatctgggcgtgcacttt
ctgcagtacatcctgaaagaattacagacaaccctggtccgtggttatcaggtgcatgtc
ctcactttcactgtgtacacactgctgcaaggcctcgccagcaagctgcaagttggggac
ttagattgttgtcttcccatcatgactgagatttttaaccatgaattatttggtgccctt
gctgaagaaaaggaagtaaagcagattctgtccaaagtcatggaggctcgcaggagcaag
agttacgattcttatgagatcctcggcaagtttgtcggaaaagagcaagttacaaaactt
attcttccattaaaagagatcctacaaaataccatgagcttaaaacttgcccggaaagtt
cacgaaaccttacgccgaattatagcaggcttaattgtgaatcccggcatgacagcagat
gcgctcctcctgctcagttacggtctggtcagtgagaacctgccactgctaacagaaaag
gaaaaaaagccggcagcccctgtgcccgatgctcggctgccgccccagagctgccttctg
ctccctgaaactccagttcgaggtgggcccaaagctgtcgtgagcaagaaaaccaacatg
cacatatttattgagtctgggcttcggctgctgcacctgagtctaaagacgtctaagatc
aagtcttctagtgagcacgtgctggagatgttggaccctttcgtgtcggtcctcataagc
tgcctgggtgcccaggatgtgaaggtgatcacgggtgctttgcagtgcctgatctgggtc
ttgcggttccctctgccttccatagcaaccaaagcagagcagctgacgaaacaccttttc
ctcctgctgaagaactatgcaagagtgggcgctgcccggggccagaacttccacctggtc
gtgaactgtttcaagtgtgtgaccatcgttgtaaagaaagtcaagtctcaccagataact
gagaaacaacttcaggttctcctggcttatgctgaagaagacatttatgatacttcaaga
caagccactgcattcagtcttctgaaggctatcttatcaagaaaattattggttccagaa
attgatgatatcatgcggaaagtatccaagttggcaatttctgcacaaaatgaacccgcc
agggtccagtgcagacaggttttcctgaagtacattcttgactatcccctcggtgagaaa
ttgaggcccaacttggaattcatgctggctcagctgaattatgaacatgagacgggaaga
gaatccactttggaaatgatcgcctatctgtttgagaccttccctcagggcctcctccat
gagcactgcgggatgttcttcatccctctttgcctgatgatggtcaacgatgactccgcc
atgtgcaaaaggatggcctccatggccgtcaagtccttactcggcaaggtcagccaggag
aagagagactggctgttcgctctggtcacctcctggcttgaagcgaaaaagcgattaaac
aggcaactagctgccctggcctgtggtttatttgtggaaagtgaaggagttgattttgag
agaaggcttagaactcttcttcctgtgattgaaaaggaaattgatcctgaaaattttaaa
gatatcatagaggagacggaagaaaaggctgcagatcgcctgctgtttggttttctcaca
ctgataagtaaactcatcaaggaatgtaatattattcactttaccaagccctccgagact
ttgagtaaaatctggagtcacgtgcactctcacctcagacacccgcacagctgggtgtgg
ctcacagcagcccagattttcggactgctctttgcctcttgccaaccagaagagctcatt
caaaaatggaaaggcagaaagaccaaaaagaagacctcagaccccatagcagtccggttc
ctaacaagtgaccttggccagaagatgaagagtctctctctggcttcttaccatcagctg
cattccaaattcttggatgagtctctaggagagcaggttattaagaacttactgttcata
gcaaaagtcttatatttactggaacttgaatctgggaacacacaaggagaggtaaacgac
tcagaagagcaggacactttaggagatgctctggccagagaggcagcagaagagaaggct
ggtgcacatgggaagacagagtccaacagagaacagacggaagagcgcagcaagccggcc
acactgatgtggctgatccagaagctgtcccggatggctaagctggaagccgcctactcg
cccagaaaccccttaaagagaacctgcgtctttaagttcctcggtgctgtagccgtggat
cttggagtagaccgggtaaagccctatctcccggtgatcatcgctcccctgtttcgagaa
ctcaacagcacctattcggagcaagatcctgtactgaagaatttatcccaggaaatcata
gaattactcaaaaagctggttggactcgagagcttctcattggccttcgcctctgtccag
aagcaggctagcgagaagagggctctccggaagaagaggaaggccctggagtttgtaacc
aatcctgatattgctgtcaagaagaagttgaagaaacataaaaataaaagtgaagcaaag
aagagaaagatagagttcctgcgccctggctataaggccaagaggcagaagtcccacagc
ctcagagacttagcaacggtagagtga
DBGET
integrated database retrieval system
