Apodemus sylvaticus (European woodmouse): 127671425
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Entry
127671425 CDS
T10613
Symbol
Rpgrip1l
Name
(RefSeq) protein fantom
KO
K16550
protein fantom
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
asyl01009
]
127671425 (Rpgrip1l)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
asyl03037
]
127671425 (Rpgrip1l)
Protein phosphatases and associated proteins [BR:
asyl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127671425 (Rpgrip1l)
Cilium and associated proteins [BR:
asyl03037
]
Primary cilia and associated proteins
MKS complex
127671425 (Rpgrip1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-C2_1
RPGR1_C
C2
Motif
Other DBs
NCBI-GeneID:
127671425
NCBI-ProteinID:
XP_052022060
LinkDB
All DBs
Position
21:39077627..39175113
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AA seq
1258 aa
AA seq
DB search
MSGPSDETAGDLPVKDTGLNLFGVGGLQETSTARTVKARQAVSRVSREELEDRFLRLHDE
NILLKQHARKQEDKIKRMATKLIRLVNDKKRYERVGGGPKRLGRDVEMEEMIEQLQEKVH
ELERQNEVLKNRLISAKQQLQVQGHRQASYNRVQARINTGRRKASAPAGLQECPGKGIKF
QNVDEAETVQPTLTKYSNSLLEEARGEIRNLENVIQSQRGQIEELEHLAEILKTQLKRKE
NEIELSLLQLREQQATDQRSNIRDNVEMIKLHKQLVEKSNALSVMEGKFIQLQEKQRTLR
ISHDALMANGDELNMQLKEQRLKCCSLEKQLHSVRFAERRVEELQDRINDLEKERELLKE
NYDKLYNSAFSAAHEEQWKLKEQQMKVQIAQLETALKSDLTDKTEVLDKLKTERDQNEKL
VQENRDLQLQCLQQKQQLQELQNRMKFFNQESDINADDLSEALLLIKAQKEQKSGDLSFL
EKVDSKSNKDLDRSMKELQATHAETVQELEKTRNMLIMQHKINKDYQMEVETVTQKMENL
QQDYELKVEQYVHLLDIRAARIQKLEAQLKDIAYGTKQYKFKPEIMPDDSVDEFDETIHL
ERGENLFEIHISKVTFSSEVLRASGDKELVTFCTYAFYDFELQTTPIVRGLYPEYNFTSQ
YLVHVNDLFLQYIQKSTVTLELHQAYSTDYETIAACQLRFHEVLEKNGRIFCTTSLVGTK
GDIPNFGTVEYWFRLRVPMDQAIRLYRERAKALGYITSNFKKPEKMQLLSEQAATAPQIR
SAESTDANFNELHVTVKCCTNLQSRASHLQPHAYVVYKFFDFPDHDTAIIPSSNDPQFDD
HMCFPVPMNMDLDRYLKSECLNFYVFDDSDTQENIYMGKVNVPLISLAHDRCISGIFELM
DKEKHAAGTIQVILKWKFTYLPPSGSITTEDLGRFICREQPETIQRPPPMSSDVTSAVAP
KPKPRQRLTFVDKKVSFVDTVPHLSPETSPPPKDIKDNSPEVDMPTVAFPSKESSVAKVE
ENVGKMHEGKEDDISFLSEGQLASQSVASSEDETEITEELEPEDEDRSASDSDDCIIPSS
VSTNTKRPSEEIRIEIIALSLNDSQITREDAIQRLFIECRFYSLPAEETPMSLPKPKSGQ
WVYYNYTNVIYLDKENNPAARDILKAILLRRELPHRSVRFTVVSDPPEDEQDLECEDIGV
AHVDLADLFQKGRDIIEQDIDVLDARTDGGTIGKLKVTVEALHALQSVYEQYRKDLEA
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcccaagtgacgagacagcaggagacctgccggtgaaagatacaggtctaaac
ctctttggagttggagggttacaagaaacctcaactgcgcgcacagtgaaggctcgccag
gcagtgtcacgtgtcagtcgtgaagaactggaagacagatttttgcgcttgcatgatgag
aacattttacttaaacagcatgcccgcaagcaagaggataaaattaaaagaatggccacc
aagttaatacggctagttaatgacaagaaaagatatgagcgggttggtggcggccccaag
cggctgggacgagatgtggaaatggaggaaatgattgagcagctgcaagaaaaagttcat
gagcttgaaagacaaaatgaagttctcaaaaacaggctaatatcagccaagcagcagctc
caggtccaggggcacaggcaggcgtcgtacaatcgtgtgcaggctcgcattaacaccggc
cgcaggaaagcaagcgcccctgcgggcttgcaggaatgcccgggaaaaggtataaaattt
caaaatgtagatgaagcagaaaccgtacaacccacgctcacaaaatacagcaatagttta
cttgaagaagccagaggagaaataagaaatttagaaaatgttattcagtcacagagaggc
cagatagaagaattagagcacttggcagagatcctgaaaactcagttgaagaggaaagaa
aatgaaatcgagttatctcttcttcagcttcgagaacagcaagctacagaccagaggtca
aatattcgggacaatgtagaaatgattaagcttcataagcaactagtggagaaaagcaat
gctctttcagtcatggaaggaaaatttattcagcttcaagagaagcaaagaacactgagg
atcagccatgatgccttgatggcaaatggagatgagctgaacatgcagcttaaggaacag
cgtttgaagtgctgcagcctggagaagcagctgcactctgtgaggtttgcagagaggcgg
gtagaggagctgcaggatagaattaatgatttagaaaaggagcgagaacttttaaaggaa
aactatgataaactttataacagtgccttcagtgctgcccatgaagaacagtggaagtta
aaggagcagcagatgaaagtgcagatcgctcagctcgaaactgccttaaaatctgatctt
acagacaaaaccgaagtccttgacaaattaaagactgaaagagaccaaaatgagaaactg
gttcaagagaatagagatctacagctgcagtgtctgcagcaaaagcagcagctgcaggag
cttcaaaaccgtatgaagttcttcaaccaggaaagtgacatcaatgctgatgacctcagt
gaagcgctcctgctgataaaggctcagaaagaacaaaaaagtggagatctttcgttttta
gaaaaagtggacagcaaaagtaataaagatctagatcgttccatgaaagagcttcaagca
actcacgcagaaacagtacaagaacttgaaaagacaagaaatatgttaattatgcaacat
aaaataaataaagactatcagatggaagttgaaacagtgactcagaagatggaaaatttg
caacaagattatgaactcaaagtggaacaatatgttcatcttcttgatatcagggctgca
cgcatccaaaagctcgaagcccagttaaaggatattgcctatggcaccaagcagtacaaa
tttaaaccagaaatcatgccagatgactctgttgatgaatttgatgaaaccatccaccta
gaacgaggagaaaatctatttgaaatccacatcagcaaagtcaccttttcttctgaagtt
ctgcgggcctctggtgataaagagcttgtcactttctgtacctacgctttctatgacttt
gaactgcagacaactcccatagtgcgaggcctttacccagaatataacttcacttctcag
tatcttgtccacgtcaatgacttatttttgcagtacattcagaagagcactgtcactctg
gagctgcaccaagcctacagcacagattatgagacaattgcagcatgtcaactgagattc
catgaggttctagaaaaaaacggtagaattttttgcacaacaagcttagttggaactaaa
ggagacatcccaaattttggcacagtagaatactggttccgattaagagttcccatggat
caagctattcgactgtatcgagagcgggcaaaggcattaggatacataacatcaaatttt
aagaagccagagaaaatgcaattgttgagtgagcaggcagccacggctcctcagatccgt
tcagcagagtccacagacgccaacttcaacgaactccacgttacagtaaaatgctgtacc
aacctccagtcccgagcaagccacctacagccgcacgcatatgttgtgtacaagtttttt
gattttccagaccatgatacagccattattcccagtagcaatgatccacagtttgatgat
cacatgtgtttcccagtgccaatgaatatggatttggatcgatatcttaagtcagagtgt
ctgaatttttatgtttttgatgatagtgatacccaggagaatatttacatgggaaaagtc
aatgtgcctctgatttccctggcgcatgaccggtgtatctcaggaatatttgagttaatg
gataaggaaaagcatgctgctggaactatccaagttatattaaagtggaaattcacctac
cttccaccaagtggatcaataactacagaagaccttggaaggttcatttgcagagaacag
ccagagaccattcagagaccacctccaatgtcctctgatgttacatcagctgtagcacca
aaacctaaaccgagacagcgtttaacatttgtggacaagaaggtctcttttgtggatacc
gtgccacacctgagtcctgagacttctcctccccctaaagatataaaggataattctcca
gaagtggatatgccaactgttgcatttccttccaaggaaagcagtgtagctaaggtagaa
gaaaacgtggggaaaatgcacgaagggaaagaagacgacatctctttcctatctgagggc
cagcttgcatctcaaagtgtggcttcctccgaagatgaaacagaaataactgaagagttg
gagccagaagatgaagacagatcagcttcggacagtgatgattgtatcattccaagttct
gtctccacgaataccaagcggccatcagaagaaattcggattgagatcatagctctgagc
cttaatgattctcaaataaccagagaggacgccattcagcgactgttcattgagtgccgg
ttctacagtcttcctgctgaggagactcctatgtcactgcccaaacccaagagtggacaa
tgggtctactataactataccaatgtgatctacctggataaagaaaacaacccagccgca
agagacatcctaaaagccatactgctaaggcgagaactgcctcacagaagtgtgcgcttc
accgtggtcagtgatcctcccgaggacgagcaggacctagaatgtgaggacattggcgtt
gcgcatgttgacctcgctgacctgtttcagaaaggaagagacatcattgagcaagatatt
gatgttcttgatgcccgaacagatggtggcaccatcggcaagttgaaggtgaccgtggaa
gcgcttcatgccctacagtctgtctacgagcaatacagaaaggacttggaggcttga
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