Apodemus sylvaticus (European woodmouse): 127671453
Help
Entry
127671453 CDS
T10613
Symbol
Sf3b3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127671453 (Sf3b3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asyl03021
]
127671453 (Sf3b3)
03041 Spliceosome [BR:
asyl03041
]
127671453 (Sf3b3)
03036 Chromosome and associated proteins [BR:
asyl03036
]
127671453 (Sf3b3)
Transcription machinery [BR:
asyl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
127671453 (Sf3b3)
Spliceosome [BR:
asyl03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
127671453 (Sf3b3)
Complex B
127671453 (Sf3b3)
Complex C
U2 SnRNP specific factors
127671453 (Sf3b3)
Chromosome and associated proteins [BR:
asyl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
127671453 (Sf3b3)
TFTC complex
127671453 (Sf3b3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
127671453
NCBI-ProteinID:
XP_052022129
LinkDB
All DBs
Position
21:18782969..18819505
Genome browser
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG
EDWYVLVGVAKDLILSPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgtacaacttgaccttacagcgggccactggcatcagctttgccatccatggc
aacttctctggaaccaagcaacaggaaattgttgtttcccgtgggaagattttggagtta
cttcgcccagatcctaacactggcaaagtacataccctcctcactgttgaagtatttggt
gttatccggtcactcatggcatttaggctaacaggtggcaccaaagactacattgtagtt
ggcagtgattcaggccgaattgttatcttggaataccagccatcaaagaatatgtttgag
aaaattcaccaagaaacttttggcaaaagcggatgtcgccgcattgttcctggccagttc
ttagctgtggatcccaaaggaagagccgtcatgatcagtgcaattgagaagcagaaattg
gtatatatcttgaacagagatgctgcagcccgacttaccatttcatcccccctggaggcc
cacaaagcgaacactctggtgtatcatgtggttggagtagatgtgggatttgaaaatcct
atgtttgcttgtctggagatggattatgaggaagcagacaatgatcccacgggggaagca
gcagccaatacccagcagacgcttactttctatgaattggaccttggtttaaatcatgtg
gttcggaaatacagtgaacccttggaggaacatggcaacttccttattacagttcctgga
ggatctgacggtccaagtggagtactgatctgctctgagaattatatcacctacaagaac
tttggtgaccagccagacatccgatgtccaattcccaggagacggaatgacctggatgac
cctgaaagaggaatgatttttgtttgctctgccacccataagaccaagtccatgttcttc
tttttggcccaaacagagcagggagatatctttaagatcactttggagacagatgaagat
atggttacggagatccgcctcaagtattttgatactgtgccagttgctgctgctatgtgt
gtgcttaaaacaggcttcctttttgtggcgtcagaatttggaaatcattacttatatcag
attgcccatcttggggacgatgatgaagaacctgagttttcgtctgccatgcctctagaa
gaaggagacacattcttctttcagccgagaccacttaaaaacctcgtgctggtggatgag
ctggacagcctctctcctatcctattttgccagatagccgatttggccaatgaagacaca
ccgcagttgtatgtcgcctgtggtagggggccccggtcatccctgagagtcttaaggcat
ggacttgaggtgtcggaaatggctgtttctgagctccctggtaaccccaatgctgtctgg
acagtccgtcggcacatcgaagatgagtttgatgcctacatcattgtgtctttcgtgaat
gccactctggtgctatctatcggagagactgtggaagaagtgacggactctgggttcttg
ggcactactccaactttgtcctgctccttattaggagatgatgcattggtgcaggtgtat
cccgatggcattcgacacatacgagcagacaagagagtcaatgagtggaagactcctggc
aagaagacaatcgtgaagtgtgccgtgaaccagcgacaagtggtcatcgccctgactggg
ggagagctggtctatttcgagatggatccttcaggacagctgaatgagtacacggagcgg
aaagaaatgtcagcagatgtggtgtgcatgagtttggccaacgtgccccctggagaacag
cgatctcggttcctggctgtggggctggtggacaacactgtcagaatcatctcccttgac
ccatcagactgtttacagcctctgagtatgcaggccctcccagcccagcctgagtctctg
tgtattgtggaaatgggtgggaccgagaaacaagacgagctgggtgagaggggctctatt
ggcttcctttacctgaacattggactacagaacggtgtactgctgagaactgtcctagac
cctgttactggggacctgtctgacacccgcactaggtatctggggtcccgtcctgtgaaa
ctcttccgggtccggatgcaaggccaggaggctgttctggctatgtccagtcgctcgtgg
ctgagctactcttaccagtctcgcttccatctcacccctctgtcttatgagaccctggaa
tttgcatcgggctttgcctctgaacagtgtcccgagggcattgttgccatctccaccaat
actttgaggattttggcattagagaagcttggtgctgtcttcaatcaagtagcctttcca
ttgcagtacacacccaggaagtttgtcatccaccccgagagtaataacctcatcattatc
gagacggatcacaatgcctacacagaggctacaaaagctcagagaaagcagcagatggct
gaggaaatggtagaagcagcaggggaggacgagcgggagctggccgcagaaatggcagca
gcattcctcaatgaaaacctcccagaatccatttttggagctcccaaggctggcaatggg
cagtgggcctctgtgattcgggtgatgaaccctatccaggggaatacactagaccttgtt
cagctggagcagaacgaggcagcctttagtgtggcagtgtgtaggttctccaacactggt
gaagactggtatgtgctagtgggtgttgccaaggacttgatactgagccctcgatctgtg
gcagggggctttgtgtatacatacaagcttgtgaacaatggggagaagttggagtttttg
cacaagactccagtggaagaggtccctgctgccattgccccattccaggggagagtgctg
attggtgtgggaaagcttttacgagtctatgacctggggaaaaagaagttacttcgaaag
tgtgagaataagcatattgccaattacatatctggaatccagacaattggtcacagggta
attgtgtctgatgtccaagaaagcttcatctgggttcgctacaagcgtaatgagaaccag
cttattatctttgccgatgacacctatcccagatgggtcaccactgccagccttctcgac
tatgatactgtggctggggcagacaagtttggcaacatttgtgtggtgaggctcccacct
aacaccaacgatgaggtggatgaagatcccactggaaacaaagcgctgtgggaccggggc
ttgctcaatggggcttcacagaaggcagaggtcatcatgaactaccacgtgggggagaca
gtgctgtcattacagaagaccacattgatccctggaggctcggaatcacttgtctatacc
actttatctggaggaattggcatccttgtccctttcacatctcatgaggaccacgacttc
ttccagcatgttgaaatgcacctgcggtctgagcacccccctctttgtggacgggaccac
ctcagctttcgttcttactatttccctgttaagaatgtgattgatggagacctttgtgag
caattcaactccatggagcccaacaagcagaagaacgtctctgaagagctggaccgaacc
ccacctgaagtgtccaagaagcttgaggacattcggacccgctatgctttctga
DBGET
integrated database retrieval system
