Apodemus sylvaticus (European woodmouse): 127671547
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Entry
127671547 CDS
T10613
Symbol
Spg7
Name
(RefSeq) paraplegin isoform X1
KO
K09552
spastic paraplegia 7 [EC:3.4.24.-]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
asyl01002
]
127671547 (Spg7)
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
asyl03110
]
127671547 (Spg7)
Peptidases and inhibitors [BR:
asyl01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
127671547 (Spg7)
Chaperones and folding catalysts [BR:
asyl03110
]
Other chaperones and cochaperones
AAA proteases
127671547 (Spg7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
FtsH_ext
AAA_5
AAA_17
RuvB_N
nSTAND3
AAA_22
AAA_16
AAA_2
PglZ
Mg_chelatase
AAA_28
TIP49
AAA_14
NACHT
IstB_IS21
ORC-CDC6-like
ABC_tran
NPHP3_N
DUF8203
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
127671547
NCBI-ProteinID:
XP_052022338
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All DBs
Position
21:complement(6337719..6370970)
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AA seq
781 aa
AA seq
DB search
MAAALLLLRALRHSPEPGPRRLWGLLSGRGPGLSSGAGSRRPYVVRGTPAGLAAAGGPAP
QSLLLRILTPSFGGISGLLLKQHVVPNAVTLWQLSGSTLYFNTSRMKQKNKDNDKPKGKA
PEDDEEERRRKEREDQMYRERLRTLFIIAVIMSLLNSLSTSGGSISWADFVNEMLAKGEV
QRVQVVPESDVVEVYLHPGAVVFGRPRLALMYRMQVANIDKFEEKLRAAEDELNIESKDR
IPVSYKRTGFFGNALYALGMTAVGLAILWYVFRLAGMTGREGGFSAFNQLKMARFTIVDG
KTGKGVSFQDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAK
AVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTS
MSGFSSTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADVLDNALMRPGRLDRHVFIDLP
TLQERREIFEQHLKGLKLTQPSSFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSV
HTFNFEYAVERVIAGTAKKSKILSKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRT
NAALGFSQILPRDQYLFTKEQLFERMCMALGGRAAEAISFSRVTSGAQDDLRKVTRIAYS
MVKQFGMAPSIGPVSFPEAQEGLAGIGRRPFSQGLQQMMDHEAKLLVAKAYRHTEKVLLD
NLDKLQALANALLEKEVINYEDIEALIGPPPHGPKKMIAPQKWIDAEKEKQASGEEEAPA
P
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgccttgctgctgcttcgcgccctccgccacagcccggagcctgggccccga
cggctgtggggcctgctctccggcaggggcccaggcctctcgtccggggctgggagcagg
cggccgtacgtggtccgcgggactccggctggtctggctgcggctggaggccccgcgccc
cagagcttgctattgcgaatactgacccctagctttggaggtattagcggattattactg
aaacagcatgtagttccaaatgcagtgacactgtggcagctctcaggtagcactttgtat
tttaacacctcaagaatgaaacagaagaataaagacaatgacaaaccgaaaggcaaggcc
cctgaagatgatgaagaagagaggagacggaaagagcgggaagaccagatgtaccgagag
aggctccgcaccctcttcatcatcgccgtcataatgagcctgctgaactccctcagtacc
agtgggggcagcatttcctgggctgactttgtcaatgagatgctggctaaaggcgaggtg
cagcgtgtgcaggtggtgccggagagcgatgtggtagaagtctatcttcatcccggagct
gtggtgtttgggcggcctaggctggccttgatgtaccggatgcaggttgcaaacatcgac
aaattcgaagagaagcttcgagcagccgaagatgaactgaacattgagagcaaggacagg
attcccgtgtcctacaagcggacaggattctttgggaacgccctgtacgccctggggatg
acagcagtgggcttggccatcctgtggtatgttttcagactggctgggatgactggacgg
gaaggaggattcagtgctttcaatcagcttaaaatggcacgtttcaccattgtggacggg
aagacagggaaaggggtcagcttccaagatgtggcggggatgcatgaagccaagttggaa
gtccgagagttcgtggattacctgaagagcccagagcgtttccttcagctcggtgccaag
gttccaaagggtgcactgttgctggggcctcctggttgtgggaagacgctgttggccaag
gcagtagccacggaggctcaggtgcccttcttagcaatggctggtccagaatttgtggag
gtcattggaggcctgggagccgcccgagtgcgcagcctcttcaaggaggcccgagccagg
gccccctgcatagtgtacatcgacgagatcgacgccgtgggtaagaagcgctccacctcc
atgtccgggttctccagcaccgaagaggaacagaccctcaaccagctcctcgtcgagatg
gacggaatgggtaccacagaccatgtcatcgtcttggcgtccaccaatcgagctgacgtt
ctggacaatgctctgatgaggcctggtcggctcgacaggcatgtgttcattgatcttccc
accctccaggagaggcgggagatttttgagcagcacttgaaaggcctgaagttgacccag
cccagcagtttttactcccagcggctggcagagctgacacctggattcagtggcgccgac
atcgccaacatctgcaatgaggccgcactgcatgccgcgcgggagggccacacatccgtc
cacacgttcaactttgagtatgcggtggagcgggtcattgcaggtactgctaaaaagagt
aagatcctttccaaggaggagcagagagtggtcgctttccacgagtctggccacgccttg
gtgggttggctgctggagcacacagaggctgtgatgaaggtctccatagcacctcgaaca
aacgctgctctgggcttctctcagatcctccctcgggaccagtacctcttcaccaaggag
cagctgtttgagcgcatgtgcatggccctaggcggtcgggcagctgaagccatctcattc
agcagggtcacctctggggcccaggatgacctgaggaaggttacccgcattgcctactcc
atggtgaagcagttcgggatggctcctagcatcgggcctgtgtcctttcccgaggcacag
gagggccttgcgggcattggacgtcgtcccttcagccagggcctccagcagatgatggac
catgaagcaaaactgctggtggccaaagcctacagacacactgagaaggtgctgctggac
aacctggacaagctgcaggcgctggcgaatgcccttctggaaaaggaagtgataaactat
gaggacattgaggcgctcattggcccgccgccccatgggccaaagaaaatgatcgcacca
cagaaatggattgatgctgaaaaggagaagcaagcctcaggggaggaggaggctccggct
ccctag
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