Apodemus sylvaticus (European woodmouse): 127671647
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Entry
127671647 CDS
T10613
Symbol
Cdh5
Name
(RefSeq) cadherin-5
KO
K06533
cadherin 5, type 2, VE-cadherin
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04514
Cell adhesion molecules
asyl04520
Adherens junction
asyl04670
Leukocyte transendothelial migration
asyl05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
127671647 (Cdh5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
127671647 (Cdh5)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
127671647 (Cdh5)
09160 Human Diseases
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
127671647 (Cdh5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
asyl04515
]
127671647 (Cdh5)
04090 CD molecules [BR:
asyl04090
]
127671647 (Cdh5)
Cell adhesion molecules [BR:
asyl04515
]
Cadherins
Major cadherins
127671647 (Cdh5)
CD molecules [BR:
asyl04090
]
Proteins
127671647 (Cdh5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_2
Stevor
Motif
Other DBs
NCBI-GeneID:
127671647
NCBI-ProteinID:
XP_052022460
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Position
21:complement(25527072..25570290)
Genome browser
AA seq
784 aa
AA seq
DB search
MQRLAELATALGTFLGLLTVAAMADPNVPQRDTPYMLPAHHRQKRDWIWNQMHIDEEKNE
SLPHYVGKIKSNVNRKNAKYVLQGEFAGKIFGVDANTGDVLAFERLDREKVPEYFLTALI
VDKNTNANLEQPSSFTIKVHDINDNWPVFTRQVFNASVPERSAIGTSVIRVTAVDADDPT
VAGHATVLYQIVKGNEHFAIDNSGLIFTKDKNLDREKRDEYTVVVETQDAQGLRGESGTA
TVVIRLEDINDNFPIFTQPTYTFSVPEDIRVGKPLGFLSVVDPDEPQNRMTKYSIMQGEY
RDTFTIETDPNRNEGIIKPTKPLDYELIQQYTFYIEATDPTIRFEYLSSTAGKNKAKITI
NVQDVDEPPVFQRRFYHFQLPENQKKPRIGTVVAKDPDKAQRSIGYSIRKTSDRGQFFRI
TKQGDIYNEKELDRETHAWYNLTVEANELDSRGNPVGKESIVQVYIEVLDENDNPPEFAQ
PYEPKVCENAAQGKLVVQISATDKDVVPVNPRFKFALKTEDSNFTLINNRDNTANITVKY
GQFNREHAKFHYLPVLISDNGMPSLTGTSTLTVAVCKCNEQGEFTFCEELAAQAGVSIQA
LVAIFLCILTITVITLLIFLRRRLRKQAHAHSKSALEIHEQLVTYDEEGGGEMDTTSYDV
SVLNSVRSGSTKPLRSTMDARPAVYTQVQKPPRLAPGVHGGPREMATMIEVKKEEADNDG
GGPPYDTLHIYGYEGAESIAESLSSLSTNSSDSDIDYDFLNDWGPRFKMLAELYGSDPQG
ELII
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggctcgcagagctggccactgctttgggcaccttcttgggcctgctgacagtg
gcagcaatggcagaccctaacgtcccccagagagacaccccctacatgctgcctgcccac
caccgccaaaagagagactggatttggaaccaaatgcatatagatgaagagaaaaatgag
tcgctgccccactatgtgggaaagatcaagtccaacgtgaaccgtaagaatgcaaagtat
gtgctccaaggagagtttgctggcaagatcttcggggtcgatgctaacacaggcgatgtg
cttgcctttgagaggttagaccgggaaaaggtccctgagtacttccttactgccctcatt
gtggacaagaacaccaacgcaaacctggaacagccttccagcttcactatcaaggtgcat
gatataaatgacaactggcctgtgtttacacgccaggtgttcaacgcctctgtgccggag
aggtcagctatagggacctctgtcatccgtgtgacagcggtggatgcagatgaccccact
gtggccggccacgccactgtcttgtatcaaatcgtgaaaggaaatgagcacttcgccatt
gataattctggactcattttcacaaaggacaaaaacttggacagagagaagcgggatgaa
tacacggtcgtggtggagacacaggatgcccagggtctgcggggagagtcaggcacagcc
actgtggtgatcagactggaggacatcaatgacaacttccccatctttacccagcccaca
tacacattttcggtgcctgaagacatccgtgtgggcaagcccttgggctttctgtctgtt
gtggacccagacgagcctcagaaccggatgaccaagtacagcatcatgcagggcgagtac
agggacaccttcaccattgagacagaccccaaccgtaatgagggtatcatcaaacccacc
aagcccctggactatgaactcatccagcagtacacgttctacattgaggccacggacccc
actatcagattcgaatacctgagcagtactgcaggcaaaaacaaagccaagatcaccatc
aatgtccaggacgtggatgagcccccagtcttccagcgccgcttctaccacttccagctg
ccggaaaaccagaagaaaccacgcatcggcactgtggtggccaaagaccctgacaaggct
cagcgcagcatcggatactccatccgtaagaccagtgacagaggccaattcttccgtata
accaaacaaggggacatctataacgagaaagaactggacagagaaacccacgcctggtat
aatctgactgtggaggccaatgaactggattctaggggtaaccctgtaggtaaagagtcc
attgtgcaggtttacattgaagttttggatgagaatgacaaccccccggaatttgcccag
ccctatgaacctaaagtctgtgagaatgctgcccagggcaagctggtggtacagatctct
gccacagacaaggacgtggtgccagtaaacccaaggttcaagtttgccctgaagacggag
gacagcaacttcacactcatcaacaaccgcgacaacactgccaacatcacggtcaagtac
gggcagtttaaccgggagcacgccaagttccactacctgccggtgctcatctcagacaat
gggatgcccagcctgactggaaccagcacgctaacagtggccgtgtgcaagtgtaatgag
cagggcgaattcaccttctgtgaggagctggctgcccaggcgggcgtcagcatccaggcg
ctggtggccatctttctctgcatcctcacgatcacagtgatcaccttgctgatcttcctg
cggcggcggctccggaagcaggcgcatgcgcatagcaagagcgcgcttgagattcacgag
cagttggtcacctacgacgaggagggtggtggcgagatggacaccaccagctacgacgtg
tccgtgcttaattctgtgcgcagtggctccaccaagcccctgcggtccacgatggacgcc
cggccagcggtgtacacgcaggtgcagaagccaccgcggctggcgcctggagtacacgga
gggcccagggagatggccaccatgatcgaggtgaagaaagaagaggcagacaatgacggc
ggtggccccccctacgacacactgcacatctacggctacgagggcgcagagtccatcgca
gagtccctcagctccctgagcaccaattcctccgactctgacatcgactacgacttcctc
aacgactggggacccaggttcaagatgctggctgagctgtatggctcagacccccagggg
gagctcattatttag
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