Apodemus sylvaticus (European woodmouse): 127672008
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Entry
127672008 CDS
T10613
Symbol
Cx3cl1
Name
(RefSeq) fractalkine
KO
K05508
C-X3-C motif chemokine 1
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04060
Cytokine-cytokine receptor interaction
asyl04061
Viral protein interaction with cytokine and cytokine receptor
asyl04062
Chemokine signaling pathway
asyl04148
Efferocytosis
asyl04668
TNF signaling pathway
asyl05163
Human cytomegalovirus infection
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04668 TNF signaling pathway
127672008 (Cx3cl1)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
127672008 (Cx3cl1)
04061 Viral protein interaction with cytokine and cytokine receptor
127672008 (Cx3cl1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
127672008 (Cx3cl1)
09150 Organismal Systems
09151 Immune system
04062 Chemokine signaling pathway
127672008 (Cx3cl1)
09160 Human Diseases
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
127672008 (Cx3cl1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
asyl04052
]
127672008 (Cx3cl1)
Cytokines and neuropeptides [BR:
asyl04052
]
Cytokines
Chemokines
127672008 (Cx3cl1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
CXCL16
Motif
Other DBs
NCBI-GeneID:
127672008
NCBI-ProteinID:
XP_052023117
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Position
21:complement(35661547..35672286)
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AA seq
395 aa
AA seq
DB search
MASSPLAWLLLLAAFFHLCTLLAGQHLGMTKCNITCNKMTSQIPVALLIHYQPNQESCGK
RAIVLETRQHRYFCADPKEKWVQDAMKHLDHQTAALTKNGGKFEKRVDNVTPGITSATRG
LSPSALAKPESSTVEDLALEPTTISQEARRPMGTSQEPPAAVTGSSPSTSEAQDAGLTAK
PQSTASFEVAAISTTIWQSSAVYQSGSNVWTEEKATESPPTAALSPQVSTTSHSTPEENV
GSESQLPWVQEQDPSPEKSLGSEEINPVHTDIFQDRGPDNTVHPSVAPISSEETPSPELV
ASGSQAPKVEEPIHATADPQKLSVLITPVPDSQAATRRQAVGLLAFLGLLFCLGVAMFAY
QSLQGCPRKMAGEMVEGLRYVPRSCGSNSYVLVPV
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctcgcctctcgcgtggctgctgcttctggccgcgttcttccatctgtgtacc
ctgctggcgggtcaacacctcggcatgacgaaatgcaacatcacgtgcaacaagatgacc
tcacaaatcccggtggctttactcatccactatcagccgaaccaggagtcctgcggcaag
cgtgctattgtcctggagacaagacagcacagatacttctgtgctgacccaaaggagaaa
tgggtccaagacgccatgaagcatctggaccaccagaccgctgccctgactaaaaatggc
ggcaagtttgagaagcgggtggacaatgtgacacctgggatcacctcggccaccagggga
ctgtccccatctgccctggcaaagcctgaatcatccaccgtggaagaccttgctttggag
ccgactactatttcccaggaggcccggaggcccatggggacttcccaagagccgccagcg
gcagtgactggatcatctccctcaacttccgaggctcaggatgcggggcttactgccaag
cctcagagcactgcaagttttgaggtggctgccatctctaccaccatttggcagagttct
gctgtctaccaatctggatctaacgtctggactgaagaaaaagctaccgagtccccccct
accgcagccctatcccctcaggtatccaccacttcacattcaaccccagaggagaatgtt
gggtctgaaagccagctcccatgggtccaggaacaggacccaagtccagagaagtctcta
gggtctgaggagataaacccagtgcatactgatattttccaggacagggggcctgacaac
acagtccacccctcagtggctcccatctcctctgaagagacccccagcccagagctggtg
gcctcgggcagccaggctccgaaggtagaggaacccattcatgccactgcagatccccag
aaactgagtgtgcttatcacccctgtccccgactcccaggcagccacccggaggcaggca
gtagggctactggcctttcttggtctactcttttgtctgggggtagccatgtttgcttac
cagagcctccagggctgtcctcgcaaaatggcgggggagatggtagaaggcctccgctac
gtccctcgtagctgtggcagcaactcatatgtcctggtgccagtgtga
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