Apodemus sylvaticus (European woodmouse): 127672025
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Entry
127672025 CDS
T10613
Symbol
Siah1
Name
(RefSeq) E3 ubiquitin-protein ligase SIAH1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04115
p53 signaling pathway
asyl04120
Ubiquitin mediated proteolysis
asyl04137
Mitophagy - animal
asyl04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127672025 (Siah1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
127672025 (Siah1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
127672025 (Siah1)
09143 Cell growth and death
04115 p53 signaling pathway
127672025 (Siah1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
asyl04121
]
127672025 (Siah1)
Enzymes [BR:
asyl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127672025 (Siah1)
Ubiquitin system [BR:
asyl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
127672025 (Siah1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
127672025
NCBI-ProteinID:
XP_052023154
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All DBs
Position
21:43704479..43727756
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AA seq
314 aa
AA seq
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MTWKPTRFLHSWKGVLLTCLPTVGTRTRKRKEMSRQTATALPTGTSKCPPSQRVPALTGT
TASNNDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTCCPTCRGPLGSIRNLAME
KVANSVLFPCKYASSGCEITLPHTEKAEHEELCEFRPYSCPCPGASCKWQGSLDAVMPHL
MHQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFHFMLVLEKQEKYDGHQQFFAI
VQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIATAIMNSDCLVFDTSIAQLFA
ENGNLGINVTISMC
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgacctggaagcccacacgatttctgcattcctggaagggagtcctgctcacatgcttg
ccaaccgttgggaccaggaccagaaagaggaaagagatgagccgtcagactgctacagca
ttacccactggcacctcaaagtgtccaccatcccagagggtacctgccttgactggcaca
actgcatccaacaatgatttggcgagtctttttgagtgtcctgtctgctttgactatgtg
ttgccacctattcttcagtgtcagagtggccatcttgtttgtagcaactgtcgccccaaa
cttacatgttgtcccacctgccggggcccattgggatccattcgcaacttggctatggag
aaagtggccaactcagtactcttcccttgtaaatatgcctcttctggatgtgaaataact
ctgccgcacaccgaaaaggcagagcacgaggagctctgtgagttcaggccttactcctgc
ccctgccctggggcttcctgtaagtggcaaggctccttggacgctgtcatgccccacctg
atgcatcagcacaagtccattaccaccctgcaaggagaggatatagtgttccttgctaca
gacattaaccttcctggtgctgttgactgggtgatgatgcagtcttgttttggctttcat
ttcatgttagtcttggagaaacaagaaaaatacgatggtcatcagcagttctttgcaatt
gtacagctgataggaacacgcaagcaagctgaaaattttgcatatcgacttgagctaaat
ggtcataggcggcgattgacttgggaagcgactcctcgatctattcatgagggaattgca
acagccattatgaatagtgactgcctagtgtttgacaccagcattgcacagctttttgca
gaaaatggcaatttaggcatcaatgtaactatttccatgtgttga
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