Apodemus sylvaticus (European woodmouse): 127672411
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Entry
127672411 CDS
T10613
Symbol
Nsun5
Name
(RefSeq) 28S rRNA (cytosine-C(5))-methyltransferase isoform X1
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
asyl03009
]
127672411 (Nsun5)
Enzymes [BR:
asyl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
127672411 (Nsun5)
Ribosome biogenesis [BR:
asyl03009
]
Eukaryotic type
Other ribosome biogenesis factors
127672411 (Nsun5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NSUN5_fdxn-like
NSUN5_N
Methyltr_RsmB-F
FtsJ
Methyltransf_31
Fibrillarin
Motif
Other DBs
NCBI-GeneID:
127672411
NCBI-ProteinID:
XP_052023513
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All DBs
Position
22:complement(33980691..33985606)
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AA seq
465 aa
AA seq
DB search
MGLYAAAAAVLAGVESRQGSLKGLVYSSNFQNLKQLYALVCETQRYSAVLDAVIASAGLL
RAEKKLRPHLAKVLVYELLLGKGFRGGGGRWKALLGRHQARLKAELARLKVHRGVSRNED
LLQESSKPGQAYQVPRFVRVNMLKTCPEDAIDYFKRQGFSYQGRASSLEDLRTLKGQHFL
LDPLLPELLVFPAQTDLHDHPLYRAGHLILQDKASCLPAMLLSPAPGSHVIDACAAPGNK
TSHIAALLKNQGKIFAFDQDAKRLAAMATLLARAGVSCCELAEKDFLTVSPSDQRYGQVQ
YILLDPSCSGSGMLSRQLEERGEGMPSKERLQALAGFQQRALCHALRFPSLQRLVYSTCS
LCQEENEDVVHEALQQTSGSFRLAPVLPTWPHRGLSTFPGSEHCLRASPETTLTGGFFIA
VFERAEVVSSPAPQTSAMAPEPLSQAPKRKRRRKAAAGAGTHPGT
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggggctgtacgcggccgccgcggccgtgctagccggcgtggaaagccgtcagggctcc
ctcaagggattggtgtattccagcaacttccagaacctgaagcagttgtacgctctggtg
tgcgagacgcagcgctactcggccgtgctggacgccgtgatcgccagcgccgggctcctt
cgcgcggagaagaagctgcggccgcacctcgccaaggtgctcgtgtatgaactgttgctg
gggaaggggtttcgagggggcggaggccggtggaaggcactgctgggccggcaccaggca
aggctcaaggccgagctggcccgactcaaggttcatcggggtgtgagcagaaatgaggac
ctgctgcaggagagctccaaacccggccaagcctaccaggtaccacggttcgtgcgcgtg
aacatgctcaagacctgccctgaggatgcgatcgactacttcaaaagacaaggtttctcc
taccagggtcgggcttccagcctggaggacttgcggactctcaaggggcaacatttcctt
ttggatcccctcctgcctgagctacttgtatttcctgcacagacagacctgcacgatcat
ccgctctaccgtgcgggccatctcatcctgcaggataaggccagctgcctcccagccatg
ctgctgtcccccgccccaggctcccatgtcattgatgcctgtgctgcccctggcaacaag
accagccacattgcagcccttctgaagaaccaggggaagatctttgctttcgaccaggat
gcaaagcggctggcagccatggctacattgctggctcgggccggagtctcttgctgcgag
ttagcagagaaggacttcctgacggtttctccctctgaccagcgttacggccaggtccag
tacatcttgctggatccttcttgtagtggctctggcatgctgagccggcagctggaggaa
cgtggggaaggcatgcctagcaaggagcgcttgcaggccttggctgggttccagcagcgg
gctctgtgccatgcactcaggttcccctctctgcaacgcctagtctactccacatgttcc
ctttgccaagaagagaatgaagacgtggtccacgaggctctacagcagacctcagggtca
ttcagattggctcctgtcctacccacctggcctcacagaggtctgagtacctttccaggg
tccgagcactgcctccgggcttcccctgagaccacactcactggtggcttcttcattgct
gtgtttgaacgtgcagaggtggtgtcaagcccagccccgcagaccagtgcaatggctccg
gaacctctcagccaagccccaaagagaaagagaagacgcaaggcagcggctggtgcgggc
acgcacccaggcacatag
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