Apodemus sylvaticus (European woodmouse): 127672739
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Entry
127672739 CDS
T10613
Symbol
Sdk1
Name
(RefSeq) protein sidekick-1
KO
K16353
protein sidekick
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
asyl04515
]
127672739 (Sdk1)
Cell adhesion molecules [BR:
asyl04515
]
Immunoglobulin superfamily
Other
127672739 (Sdk1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Ig_3
I-set
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
Fn3_VIN3
V-set
Interfer-bind
Ig_RIMBP2
Ig_Rha78A_N
Motif
Other DBs
NCBI-GeneID:
127672739
NCBI-ProteinID:
XP_052024041
LinkDB
All DBs
Position
22:complement(24494503..25507081)
Genome browser
AA seq
2193 aa
AA seq
DB search
MARARPSVAGGGGAASPERAGPGRPRRSRTAHHCDPERPGLRAAPRTPGPGAGRRAAKLR
PGRGWWALLLLQLHLLRALAQDDVAPYFKTEPGLPQIHLEGNRLVLTCLAEGSWPLEFKW
IRNDSELTTYSSEYKYIIPSLQKLDAGFYRCVVRNRMGALLQRKSEIQVAYMGNFMDTDQ
RKTVSQGHAALLNLLPIVSCPRPQVTWFREGHKIIPSSRIAITLENQLVILATTASDAGA
YYVQAVNERNGENKTSPFIHLSVARDTGTHEAMAPIIVVAPGNRSVVAGSSETTLECIAN
ARPVEELSVHWKRNGVRLTSGLHSYGRRLTITNPTSADTGMYVCEATLRGSAFEPARAKA
FLSIIEPPYFTAEPESRILGEVEETVDIPCRAMGVPLPTLQWYKDAIPLSKLQRPRYKVL
PSGGLHIQKLSPEDSGIFQCFASNEGGEIQTHTYLDVTNIAPAFTQRPVDTTVTDGMTAV
LRCEVSGAPKPAITWKRGDHILASGSVRIPRFMLLESGGLRITPVFIQDAGNYTCYAANT
EASVNASASLTVWNRTSIIHPPEDLVVIKGTTATLCCGATHDPRTSLRYVWKKDNAVITA
SSSSRIVVEKDGSLVISQTWSGDIGDYTCEIVSEGGNDSRTARLEVIELPHPPQNLLASL
SPARSHSVTLSWVRPFDGNSPVLYYIVQVSENNSPWKVHLSNVSPEMTGVTVSGLTPART
YQFRVCAVNQVGKGQYSTETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHN
GVLRGYILRYRLAGLPGEHQQRNISSPEVNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSR
AVTEYTLQGVPTAPPQNVQAEAVNSTTVHFLWNPPPQQFINGINQGYKLLAWPADAPETV
TVVTIAPDFHGIHHGYITNLKKFTAYFTSVLCFTTPGDGPPSTPQLLWTHEDKPGAVGHL
SFTEILDTSLKVSWQEPLERNGMIVGYQISWEVYGKNDSRLTHTLNSTTHEYKIQGLSSL
TTYTIDVAAVTAAGVGLSTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKT
AICRWIVEGQVGAIGDEEEWVTLYEEENEPDAQMLEIPNLTPYTHYRFRMRQVNIVGPSP
FSQSSRVIQTLQAPPDVAPTSLTVRTASETSLRLRWVPLPDSQYNGNPESVGYRVKYWRS
DQPSSTLAQVVNDRLERELTIEELEEWTEYELRMQAFNAIGAGPWSELVRGRTRESVPSA
APENVSAEAVSSTQILLTWASVPEQDQNGLILGYKVLYRAKDLDPEPRSHVVRGNHTQSA
LLAGLRKFVVYELQVLAFTRIGNGVPSAPLILERTKDDTPGPPVRLVFPEVRLTAVRIVW
QPPEEPNGVILGYQIAYRLASGSPHTFTTVEVGATVRQFTATELAPESAYIFRLSAKTRQ
GWGEPLEATVITTEKRERPAPPRELLVPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRE
LPGGEWQTYSSSISHEATACAVERLRPFTSYKLRLKATNDIGDSDFSAETEAVTTLQDVP
GEPPGSVSATPHTTSSVLIQWQPPRDESLNGLLQGYRIYYRELESETGMSPEPKTLKSPS
ALRAELNAQSSFKTVNSSSTLTTYELTHLKKYRRYEVIMTAYNIIGESPASVPVEVFVGE
AAPAMAPQNVQVTPLTASQLEVTWDPPPPESQNGNIQGYKVYYWEADSRNETEKMKVLFL
PEPVVKIKDLTSHTKYLVSISAFNAAGDGPKSDPCQGRTHQAAPGPPSFLEFSEITSTTL
NVSWGEPSAANGILQGYRVVYEPLAPVQGVSKVVTVDVKGNWQRWLKVRDLTKGVTYFFR
VQARTIAYGPELQANVTAGPAEGSPGSPRNVLVTKSASELTLQWTEGNAGNTPTTGYVVE
ARPSDEGLWDMFAKDIPRSATSYTVGLDKLRQGVTYEFRVVAVNQAGFGEPSRPSIAVSA
QAEAPFYEEWWFLLLMALSSLLLVLLVVFVLVLHGQSKKYKNCGTGKGISNMEETVTLDN
GGFAALELSSRHLNVKSTFSKKNGTRSPPRPSPGGLHYSDEDICNKYNGAVLTESVNLKE
KSVDGSESEASDSDYEETLPKHSFVNHYMSDPTYYNSWKRRPPAAAPHRYEAVAGAEAGP
HLHTVITTQSAGGVYTPAGPGARAPLTGFSSFV
NT seq
6582 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgcccggccctcggtggcgggcggcggaggcgcggcgtcccctgagcgcgcg
gggcccgggcggccgcgccggagccggaccgctcaccactgcgaccccgagcgccccggg
ctgcgcgcagcgcccaggacccccgggcccggcgcgggccggcgggcggcaaagttgagg
ccgggccgcgggtggtgggcgctgctgttgctccagctgcacttgctgcgggcgctggcg
caagatgatgttgcaccgtatttcaaaacggagccgggcctgccacagatccacctggaa
gggaaccgccttgtgctcacctgcctggctgaagggagctggcctctggaattcaagtgg
atacggaacgacagtgagctcaccacctacagcagcgaatataagtatatcatcccctct
ttgcagaagctggatgccgggttttaccgctgcgtggtgcggaacaggatgggagctctc
ttgcagagaaaatcagaaattcaagtagcatatatggggaacttcatggatacagaccag
aggaaaacagtttctcaagggcacgcagcacttctaaacttactgcctatcgtcagctgc
cccagaccgcaagtgacgtggtttagagaaggacacaagattattccaagcagcagaata
gccatcacgttggagaatcagctggtgatccttgctacaacagcgagtgatgctggggct
tactacgtgcaggctgtgaacgagaggaacggagagaacaagaccagcccgtttatccat
ctgagtgtagcacgagatactggtacccacgaggccatggcccccatcatcgtggttgcc
ccgggcaacagaagtgtggtagcagggtccagtgagaccaccttggagtgcatagccaat
gccaggcctgtggaggagctgagtgtgcactggaagagaaacggagttcgactcacaagt
ggactgcacagctacgggaggcgccttaccatcaccaacccgacatcagcagatacgggg
atgtatgtgtgcgaggcaacactccgggggagcgcatttgagccagccagggccaaagcc
ttcctttccatcatagagccgccatatttcaccgctgagccagagagtcggattttaggg
gaagtggaagaaaccgtggacatcccgtgtcgagccatgggggttcctcttcccaccctc
cagtggtacaaagatgctatccccctcagcaagctccagaggcctaggtataaagttctc
cccagtggaggcctgcacattcagaagctcagtccagaagactccggaatcttccagtgc
tttgccagtaatgaaggaggggagatccagactcacacttacctggatgtgaccaatatt
gctcctgccttcacccagcgtccagtggacactacagttactgatgggatgacggctgtc
ctgaggtgtgaggtgtccggggctcccaaacccgccatcacatggaagagaggggaccac
attctggccagtggctctgtccggattcctaggttcatgctgctggaatccggaggactg
aggatcacccctgtcttcatccaggatgctggtaactacacctgctatgcagccaacacg
gaggcctccgtgaacgcctccgcctcgctcaccgtgtggaatcgaacgtccatcattcac
cctccagaggacctcgtggtgattaaggggacaacggccaccctgtgctgcggagctacc
cacgaccctcggacctctctccgctacgtttggaaaaaggacaacgcagtcatcacagca
tccagcagctccaggattgtggtagagaaggacgggtcacttgtcattagccagacatgg
tcaggggacatcggcgactacacttgtgaaattgtatcagagggagggaacgactcccga
acagcacggctggaagtaattgagctgcctcacccacctcaaaacctgctggccagcttg
agtcctgcacgtagtcactcggtgacactatcctgggttcggccctttgatggaaacagc
ccagtcctttactacattgtgcaagtatctgaaaacaactctccgtggaaagtgcatctg
tcaaacgtcagcccggagatgacaggcgtcactgtgagtggcttgactccagcccggacc
tatcagttcagggtgtgcgctgtgaatcaagtgggcaaaggccagtacagcacagagacc
agcagattgatgttacctgaagagccaccaagcgcccccccaaaaaacatcgtggccagc
gggagaaccaaccagtccatcatggtacagtggcagccaccacctgaaacagagcacaat
ggggtgctccggggctacatcctcaggtaccgcctggccggcctgcctggggaacaccag
cagaggaacatcagcagcccagaggtgaactactgcctggtcactgacctcatcatctgg
acacagtacgagatccaggtggctgcctacaacggggcaggcctgggtgtcttcagcagg
gcagtaacggagtataccttacaaggagtgcccaccgcacccccccagaacgtgcaggca
gaggctgtgaattccaccaccgtgcacttcctgtggaacccaccgccccagcagttcatc
aacggcatcaaccagggatacaagctcctagcctggccagcagatgctcccgagactgtc
accgtagtcactattgctcctgacttccacggaatccatcatgggtacataacaaacttg
aagaagttcacagcctacttcacgtctgtcctgtgttttaccaccccaggggatgggcct
ccaagcacacctcagctcctgtggacccacgaggacaaaccgggagctgtggggcacctg
agcttcacggagattttggacacctctctcaaggtcagctggcaggagcccctggagaga
aacggcatgattgtgggctatcagatttcatgggaggtatatggaaagaatgactctcgg
ctcacacacaccctcaacagcacaacccacgagtacaagatccaaggactgtcgtctctc
accacctacaccatcgatgtggctgccgtgaccgccgctggagtgggcctgagcacgtca
tccaccatctcttcaggagtgcccccagaccttcccggtgctccatccaacctggtcatt
tccaacatcagccctcgctcagccacgctccagttccgacccggctatgatgggaagact
gccatctgcaggtggattgtggaggggcaggttggtgccatcggggacgaggaggagtgg
gtcaccctctatgaggaggagaacgagcccgatgcccagatgttggagattccaaacctc
acaccctacacacactacaggtttcgaatgaggcaagtgaacatcgtgggtcccagcccc
ttcagccagtcatcccgggtcatccagaccctgcaggccccacctgatgtggctccaacc
agcctcactgtccgaacagccagtgagaccagcctgcggctacgctgggtgcctctgcct
gattcccagtataatgggaacccggagtctgtgggctacagggtcaagtactggcgttca
gaccaaccatcctcaactctggcccaagttgtcaatgaccgtctggaaagggagctgact
atcgaggagctggaggagtggacagagtatgaattgcggatgcaggccttcaacgccatt
ggggctgggccctggagtgagctggtgcggggccgcacacgggagtcagttccttcagca
gctcctgaaaatgtgtctgcagaggctgtcagctccacccagatcctactgacttgggct
tcagttcctgagcaggaccagaatgggcttatcctaggctacaaggttctgtaccgtgcc
aaagacctggacccagagcccagaagccacgtggtccgagggaatcacacgcagtctgcg
ctgctggccggcctgcgaaagttcgtggtctatgagctccaagtgctggcgttcacacgg
atcgggaatggggtccccagtgcacccctcatcttggagcgcaccaaagatgacaccccg
ggtcctcctgtgcggctggtgttccccgaagtaagacttactgcagtgcggattgtgtgg
cagcctccagaggagcccaatggtgtgattctggggtaccagatcgcctaccgcctggcc
agcggtagtcctcacaccttcaccactgttgaggtgggtgccacggtgcggcagttcaca
gccacggagctggccccggagtctgcgtacatcttcagactgtctgctaagacaagacag
ggctggggggagcccctagaggccacagttatcaccactgagaagagagagaggccagcg
ccccccagagagctcctggtaccccaggcggaagtgacagcacgtagcctgcggctccag
tgggtccctggcagcgacggggcctccccgatccgatacttcaccgtgcaagtgcgggag
ctgcccggtggagagtggcagacatactcgtcatccatcagccacgaggccacagcctgt
gcggttgagaggctgaggcctttcacctcctacaagctgcgcctgaaggccaccaatgac
attggggacagtgacttcagtgcagaaacagaggccgtgaccacattgcaagatgttcca
ggggagccaccaggatctgtctcagccacaccgcacaccacatcctcggttctgatccag
tggcagcctccccgggacgagagcctgaacggccttctgcaaggctacaggatctactac
cgtgagctggagtccgagacaggcatgagccctgagcccaagacactcaagagcccctct
gccttacgtgccgaactcaatgctcaaagcagtttcaagactgtgaacagcagctctacg
ttaacaacctatgaattaacacatctgaagaagtaccggcgctatgaagtcatcatgact
gcctataacatcatcggtgagagcccagccagtgtaccagtggaagtcttcgttggtgag
gctgccccagcgatggccccacagaacgtccaggtgaccccactcacggccagccagctg
gaggtcacatgggacccaccacccccagagagccagaatgggaacatccagggttacaag
gtttactactgggaggcagacagtcgcaatgagacagagaaaatgaaggtcctctttctc
cccgagcctgtggtgaagatcaaggatctcaccagccacacaaagtacctggtcagcatt
tcggccttcaatgctgctggcgacgggcccaagagcgacccgtgccaaggacgcacacat
caggcagctccagggccccccagcttcttggagttctcagaaataacctctaccacgctc
aacgtgtcctggggggagccatcagcagccaacggcatcctacagggctatcgggtggtg
tatgagcccttagcgccagtgcaaggcgtgagcaaggtggtgaccgtggacgtgaaaggg
aactggcaacgctggctgaaggtgcgggacctcaccaagggagtgacctatttcttccgt
gtccaggcgcggaccatcgcctacgggccggagctccaggccaatgttactgcagggcca
gccgaggggtccccaggctctccaagaaatgtcctcgtcaccaaatctgcctctgagctg
acccttcagtggacagagggaaacgctgggaacacgcctactacaggctacgtcgtagaa
gccaggccatcagatgaaggcttatgggacatgtttgcaaaggacattcccaggagtgct
acatcatacaccgtgggcctggacaagttgcggcaaggggtgacctatgagttccgggta
gtggctgtgaaccaggcaggctttggggagcccagccgcccttccattgcagtgtcagcg
caagctgaagccccgttctatgaagagtggtggttcctgctgctgatggcgctctccagc
ctcctccttgtcctcttggtggtcttcgtgctggtcctgcatgggcaaagcaagaagtat
aagaactgcggcacaggtaagggcatctccaacatggaggagacagtgaccctggataac
ggagggttcgccgccttggaactcagcagccgccatctcaatgtcaagagcaccttctcg
aaaaagaacggaaccagatctccaccccgaccaagccccggaggtctgcactactctgac
gaggacatctgcaacaagtacaatggcgccgtgctgacggagagtgtgaacctcaaggag
aagtcagtagatggctcggaatctgaggcctctgactcagactatgaggaaaccctgccc
aagcactccttcgtcaaccactacatgagcgaccccacctactacaactcctggaagcgg
cgtcccccggctgcggcaccgcacagatacgaggcggtggcaggggccgaagccggcccg
cacctgcacacggtcatcaccacacagagcgcgggcggagtctacacaccagctggcccc
ggagcccgggcccccctcaccggcttctcctccttcgtgtga
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integrated database retrieval system
