Apodemus sylvaticus (European woodmouse): 127672963
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Entry
127672963 CDS
T10613
Symbol
Usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
asyl01002
]
127672963 (Usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
asyl04121
]
127672963 (Usp42)
Enzymes [BR:
asyl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127672963 (Usp42)
Peptidases and inhibitors [BR:
asyl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
127672963 (Usp42)
Ubiquitin system [BR:
asyl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
127672963 (Usp42)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
127672963
NCBI-ProteinID:
XP_052024411
LinkDB
All DBs
Position
22:22973553..22995592
Genome browser
AA seq
1356 aa
AA seq
DB search
MTIVDKTEPSDPSACQKQPGSCEAVSPEDMDTGSASWGAVSSISEVSNHTLSLGPVPGAV
VYSNSSVPEKSKPSPPKDQVLGDGIAPPQKVLFPSEKICLKWQQSHRVGAGLQNLGNTCF
ANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQTHITQALSNPGDVIKPMFVIN
EMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLVCQIFGGYLRSR
VKCLNCKGVSDTFDPYLDITLEIKAAQSVTKALEQFVKPEQLDGENSYKCSKCKKMVPAS
KRFTIHRSSNVLTISLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPIIYVLYAVLV
HTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLNQQAYVLFYIRSHDVKNGGEP
AHPAHSPGQASPRPGISQRVVNKQAAPGFIGPQLPSHVMKNTPHLNGTTPVKDTPSSSVS
SPNGNTSVSRASPATASTSVQNWSVNRPSVIPEHPKKQKITISIHNKLPVRQGQAQLNNN
LHGTCLEAPSKAAPSSTITNPSAVQSTSNVPTTSVSNKVAKPVSPGESCAKPMMNGKAKV
GSSVLVPYGAESSEDSDEDSKGLAKENGVDVTASAHPERPEAAADEDGEAAPHELQESVM
LNGANSADSDSRESSLAFDSASCQVQPDLHTENLFSKLNGLPGKVTPAPLQSVPEDRIPE
DRTFKLTNQAKGPAGEESWTTAGGSSPKDPVSQPEPISDEASPLEIPEAVTNGSTKTPST
TPPLEPTISCTKEDSSVVVSAEPVEGLPSVSALCNSTGTTLGDAPVPESCDPGDLTAISS
QPTQAVKGDAAENAQDSAVAEVVERLSPAPSVLTGDGCEQKLFLYLSTEGSEEAEDSSRS
SGVSADTMPPQPDRTTTSSCERAAEQASGERGSEAGVGPRAQEPSPAKEKMSSLRKVDRG
HYRSRRDRSSSGEHARDSRPRPEDHHHKKRRCYSRERPKQERHPANTYCNGGQHMGHGDR
ASPERRSVSRYSHHHSRIRNGLEQDWNRYHHVENEPAWVRERFYPDKMRWDKCRYYPERY
TPLYTAREAREAREAREAREAREAREARESREAREWRPPHGREHERLVQSGRPHKDSYWG
RKGWELQSRGKDRPHFQSPREAAGLAVPLERQLQEKAALSAQDSSHSLPERFHGHQSVKA
RKRRYEALENTDGHLEKKVHKSLEKDAEEPRVKKHKKSKKKKKSKDKHRDRDSRHQQESD
FSGAYSDADLHRHRKKKKKKKRHSRKSEDFIKDVEMQSPKVSSHEAVGHFRRTEGNFPLA
DGLPVEDSGPSREKTKHLRMESRPDRCHLSEYGQGD
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaaaactgagccttcagacccatcagcctgtcagaagcagcctggc
agttgtgaggcggtctcacctgaagacatggacacaggctctgccagctggggtgctgtg
tcttcaataagtgaagtctcaaatcatacactttccttagggccagtgcccggtgctgta
gtttattctaattcatctgtaccagaaaaatcaaaaccatcaccaccaaaggatcaagtc
ctaggtgatggtattgctcctcctcaaaaggtcctttttccatctgaaaagatttgtctt
aagtggcaacaaagtcatcgagttggcgctgggctccagaatttgggcaatacctgtttt
gccaatgccgcattgcaatgtctgacttacacgccacccctcgccaattacatgttatct
catgaacactccaagacatgccacgcagaaggattttgtatgatgtgcacaatgcagacg
cacataacccaggcacttagcaaccctggggatgttatcaagccaatgttcgtcatcaat
gaaatgcggcgtatagctagacacttccgttttggaaaccaggaagatgcccatgaattt
cttcagtacacggtcgatgccatgcagaaagcatgtttaaatggcagcaataaattagac
agacacacccaggccaccaccctggtctgccagatatttggaggctacctaagatcccga
gtcaaatgtttaaattgcaagggtgtttcagatacctttgacccatatctggacataaca
ttggagattaaggctgcacagagtgttaccaaggcgttagagcagtttgtgaagccagaa
caactggatggagaaaactcctacaaatgtagcaagtgcaaaaaaatggttccagcttcc
aagagattcaccatccatcggtcctctaatgttctcacgatttcactgaagcgttttgcc
aactttaccggtggaaaaattgctaaggatgtaaaatatcccgagtatcttgatattcgg
ccctatatgtctcagcccaatggagagccaattatctatgttttgtatgctgtgctggtg
cacactggttttaactgtcatgctggtcactacttttgctacatcaaggctagcaatggc
ctctggtatcagatgaatgactccatcgtgtccaccagtgatattagatcggtgcttaac
cagcaagcttatgtgctcttttatatcaggtcccatgatgtgaaaaatggaggggaaccc
gctcatcctgcccacagccccggccaggcctctccccgacctggaatcagtcagcgggtg
gtcaacaagcaggcagcaccaggctttatcgggccccagctgccttcccatgtgatgaag
aacacaccacacttgaatggtaccacaccagtgaaagacacaccaagtagttctgtgtcc
agccctaacggaaacaccagcgtcagtagggccagtcctgctactgcttcgacttctgtg
cagaactggtctgttaacaggccctccgttattccagaacaccccaagaaacaaaaaatt
accatcagtattcacaacaagttgcctgttcgccaaggtcaggcccagctgaataacaac
ctccatggcacttgtctggaggccccgagcaaggcggcgccctcctccaccatcactaac
ccttctgcagtacagtctacctcgaacgtacccacaacatcagtgtctaacaaagtagca
aaaccagtttcccccggcgagtcctgtgccaagcccatgatgaatggcaaggctaaagtg
ggctccagcgtgctcgtcccctatggggccgagtcctcagaggactctgacgaggactca
aagggcctggccaaggagaacggtgtggacgtgacggccagcgctcaccccgagaggcca
gaagctgctgcagatgaggatggtgaggctgcccctcatgagcttcaagagtccgtcatg
ctaaatggtgctaatagcgcagacagtgactcgagagagagcagcctggcgtttgacagt
gccagttgccaggtccagcctgatctacacacagaaaacctcttttctaaacttaatggt
cttcccggaaaggtgacgcctgcgcctttgcagtctgttcctgaagatagaatccctgaa
gatagaaccttcaagctcaccaaccaggcaaagggtccagcgggtgaagagagttggact
acggcagggggaagctctccaaaggaccctgtttcacagccggagcccatcagtgatgag
gccagtccccttgagataccggaggcagtcaccaatgggagcacgaagaccccttccacc
acgccacccctggagcccaccatcagctgtaccaaagaagactcgtctgttgttgtctca
gccgaacctgtggagggtttgccttctgtctctgctctttgtaacagcaccggtactacc
ttgggggatgccccagtgcccgaatcgtgtgaccctggagacttgactgccatctcgagc
cagccaacccaagccgtgaaaggtgatgcagctgagaacgcgcaggactctgccgtggct
gaagtggtggagaggctgagccctgctccctcagtactcacaggggacggctgtgagcag
aaactcttcctttacctcagcacagaaggctcagaggaggcggaagactcttccagaagc
tcgggggtctctgctgatacgatgccccctcagcctgacaggaccaccaccagctcttgt
gaacgggctgccgagcaggcttctggggagagaggcagtgaggctggtgtggggcccaga
gctcaggagccttccccagccaaggaaaagatgagcagccttcggaaagtggaccgagga
cactatcggagccggagggaccggtcctccagtggggagcacgcaagggacagcaggcct
cgaccagaggaccatcaccataagaagcggcgctgctacagccgggagcggcccaagcag
gagcgccaccctgctaatacatactgcaatgggggccagcacatgggccacggggacaga
gccagccctgagcgccgctccgtgagcaggtacagccaccaccactcacggattaggaat
ggcctggagcaggactggaaccggtaccaccacgtggaaaatgagcctgcctgggtcagg
gagagattctacccagacaagatgcggtgggacaagtgcaggtattaccctgagaggtac
acgcccctgtacacggcccgggaggctcgcgaggcccgggaggcccgggaggctcgggag
gctcgcgaggcccgggaggcacgcgagtcccgggaggcacgcgagtggcggcctccacat
ggtcgtgagcatgagcgccttgtccagtctgggcggccgcacaaggacagctactggggc
cgcaagggctgggagctgcaatcccgggggaaggaccggccccacttccaaagcccccga
gaggccgctggccttgctgtgcccctcgagaggcagctccaagagaaggctgcgctgagc
gcgcaggacagcagccacagtctccctgagcgctttcatggacaccaaagtgtcaaagcg
aggaaacggaggtatgaggctctagaaaacaccgatggccatctagaaaagaaagtccac
aaaagcctggagaaggacgcagaggagccgcgggtgaagaagcacaagaagtctaaaaag
aaaaagaagtccaaagacaaacaccgggaccgagacagcaggcatcagcaggaatccgat
ttttcaggagcatactctgatgctgaccttcatagacaccgcaagaaaaagaagaaaaag
aaaaggcattcgaggaagtcggaggactttataaaagacgtcgagatgcagtctccaaag
gtctccagccatgaggccgttggccatttccggagaacagagggcaactttccactggct
gacggtctgcctgtggaagacagcggcccttcccgggaaaaaacgaagcatttaaggatg
gaaagccggcctgacagatgccatctgtcagagtatggccagggtgactaa
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