Apodemus sylvaticus (European woodmouse): 127673014
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Entry
127673014 CDS
T10613
Symbol
Rabgef1
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
127673014 (Rabgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asyl04131
]
127673014 (Rabgef1)
Membrane trafficking [BR:
asyl04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
127673014 (Rabgef1)
Protein recycling
Other Rab GTPase associated proteins
127673014 (Rabgef1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
SSTK-IP
CID_GANP
GBD_ATRN
Motif
Other DBs
NCBI-GeneID:
127673014
NCBI-ProteinID:
XP_052024491
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All DBs
Position
22:complement(39145730..39186682)
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AA seq
491 aa
AA seq
DB search
MSLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQIQEDWELAER
LQREEEEAFASSQSSQGAQSLTFSKFEEKKTNEKTRKVTTVKKFFSASSRAGSKKEIQEA
KAPSPSITRQTSIETDRVTKEFIDFLKTFHKTGQEVYKQTKMFLESMPYKRDLSIEEQSE
CTQDFYQNVAERLQTRGKVPPEKVEKIMDQIEKHIMTRLYKFVFCPETTDDEKKDLAIQK
RIRALHWVTPQMLCVPVNEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITRCSKHIFN
AIKITKNEPASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLC
CAVAFIEKLDAQSLNLSQEDFDRYMSGQTSPRKQESESWSPEACLGVKQMYKNLDLLSQL
SERQERIMSEAKKLEKDLIDWTDGIAKEVQDIVEKYPLEIKPPNPPLAAIDSENVENDKL
PPPLQPQVYAG
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgaagtccgaacgcaggggaattcatgtggatcaatctgagctcctgtgcaag
aaaggatgcggttactacggcaaccctgcctggcagggtttctgctccaagtgctggagg
gaggagtaccacaaggcccggcagaagcagatccaggaggactgggaactagcagaacga
cttcagcgggaggaggaagaggccttcgccagcagccaaagcagccaaggagcccagtct
ctcaccttctctaagtttgaggagaagaaaaccaatgagaaaacccgcaaggtcaccaca
gtgaagaagttcttcagtgcctcttccagggctggatccaagaaggaaattcaggaagcc
aaagctcccagtccctccataacccggcaaaccagcattgagacggaccgagtgaccaag
gagttcatagactttctcaagaccttccacaagacaggccaagaagtctacaaacagacg
aagatgtttttggaatcaatgccttataaaagggatttaagtatcgaggaacagtcagag
tgtactcaggatttttaccagaatgtggctgaaagattgcagacccgcgggaaagtgcct
ccagagaaagtggagaagataatggatcagatcgagaagcacatcatgacccgtctgtat
aagtttgtcttctgcccagagactaccgatgacgagaagaaagatctcgccattcaaaag
aggatcagggctctgcactgggtgacacctcagatgctctgtgtccctgtcaatgaggaa
atccctgaagtgtccgacatggtggtgaaagcgatcacagacatcattgagatggactcg
aagcgtgtgcctcgtgacaagttggcctgcatcaccaggtgcagcaagcacatcttcaat
gccatcaagatcaccaagaacgagccagcctctgccgatgacttcctgcccaccctcatc
tacatcgtcctgaagggcaacccccctcgcctacagtccaacatccagtacatcactcgc
ttctgcaaccccagccggctcatgacgggcgaggatggctactacttcaccaacctgtgc
tgtgctgtggcgttcattgagaaattagatgcccagtctttgaatttaagtcaggaggat
tttgaccggtacatgtctggccagacgtcccccaggaagcaggagtctgagagttggtcc
ccggaggcctgcttaggtgtgaagcagatgtataagaacttggacctcctgtctcagctg
agcgagcggcaggaaaggatcatgagcgaagccaagaaacttgaaaaagacttgatagac
tggacagacgggattgccaaggaagttcaagacattgttgagaaatacccactggagatc
aagcccccgaacccacccttagcagccatcgactctgagaacgtggagaatgacaagctc
cctcccccactgcagccgcaggtgtacgcaggctga
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