Apodemus sylvaticus (European woodmouse): 127673029
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Entry
127673029 CDS
T10613
Symbol
Pan3
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127673029 (Pan3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asyl03019
]
127673029 (Pan3)
Messenger RNA biogenesis [BR:
asyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127673029 (Pan3)
mRNA degradation factors
3'-5' decay
Pan complex
127673029 (Pan3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
zf-CCCH
Pkinase
zf_CCCH_4
zf-CCCH_4
Torus
Motif
Other DBs
NCBI-GeneID:
127673029
NCBI-ProteinID:
XP_052024517
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Position
22:complement(17636574..17750778)
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AA seq
887 aa
AA seq
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MNSGGGLPPPSAAASPSSSSLAAAVAVAVAASSGVGGVPGGPAAGVKLKYCRYYAKDKTC
FYGEECQFLHEDPASGAAPGLGLHSNSVPLALAAASGAGFPPGALPGGGAGPPAGPKKPE
LGVPGAATAGGGLDGPRVAIPGMDGGALTDTSLTDSYFSTSFIGVNGFGSPVETKYPLMQ
RMTSSSSSPSLLNDSAKPYTGHDPLTSSASSLFNDFGALSISQRRKPRKYRLGMLEERLV
PMGSKARKAKNPIGCLADRCKSGVPINMVWWNRITENNLQTPNPTASEFIPKGGSTSRLS
NVSQSNMSAFSQVFSHPSMGSPATAGLAPGMSLSAGSSPLHSPKITPHTSPAPRRRSHTP
NPASFMVPPSASTPANNPVPQTASSGQVIQKETVGGTTYFYTDTTPAPLTGMVFPNYHIY
PPTAPHVAYMQPKANAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYHSLFP
LEPLPPPNRIQKSSNFGYITSCYKAVNSKDDLPYCLRRIHGFRLVNTKCMVLVDMWKKIQ
HSNIVTLREVFTTKAFAEPSLVFAYDFHAGGETMMSRHFNDPNSDAYFTKRKWGQHDGPL
PRQHAGLLPESLIWAYIVQLSSALRTIHTAGLACRVMDPTKILITSKTRLRVNCVGVFDV
LTFDNSQNNNPLALMAQYQQADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSD
LKNLILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLL
AKLGTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDA
GVPEKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAANGNDRNSN
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtggcggcggccttccgcccccctcggccgctgcctccccatcgtcctcctcg
ctggcggcggccgtggcggtcgcggtcgcggcctcgtcgggcgtcgggggcgtccccggc
gggccggctgcgggtgtgaagctcaagtactgccgctactacgccaaggacaagacgtgc
ttctacggagaggagtgtcagttcctgcacgaggacccggcctccggcgcggccccgggg
ctcggcctccatagcaacagcgtcccgctggctctggcggccgcgtcgggggccggcttt
cctcctggagcgctcccgggcgggggagcggggccgcccgcggggcccaagaagccggag
ctgggcgtcccgggggccgcgacagcgggcggcggactcgatggaccgcgggtggcgatt
cctggaatggatggaggtgctttaactgacacaagtctcacagattcctatttcagcacc
agctttattggagtcaatggatttggaagccctgtagaaacaaagtatcccttaatgcag
agaatgactagtagtagcagctccccaagccttctaaatgacagtgccaagccatacaca
ggccacgatcctctgacttcatctgcttcatccttgtttaatgacttcggtgccctcagc
atctcccagagaaggaagccaaggaagtatcgcctggggatgctggaggagaggctagtt
ccgatgggatcaaaggcacgaaaagcaaagaaccctattggctgccttgctgacaggtgt
aaatcaggagtacccatcaatatggtttggtggaacagaatcacagaaaacaatttacag
acaccaaatcctactgcaagcgaatttatacctaaaggaggatcaacctccaggctgagt
aacgtgtcccagtcaaatatgtctgccttctctcaagttttctctcacccatccatggga
agtcctgctactgctggattagcaccaggaatgtcactgtctgctggatcttcccctctc
cattcccccaaaattactccacacacatctcctgctcccagaagaagaagccacactcca
aacccagcgagtttcatggtgccgcctagtgcctccactcctgccaataaccctgttcct
cagactgcgtcctctggtcaggtgatccagaaggagactgtcggggggacgacttacttc
tatacagacacaactccagcacctttgactggaatggtatttccaaactatcatatttat
cctccaactgcacctcatgttgcttatatgcaaccaaaagcaaatgcaccttccttcttt
atggctgacgagctccgacaggagctgatcaacagacatttaataacaatggctcaaatt
gatcaagcagatatgccagcagtccccacagaagttgacagctaccatagcctgttccct
ctagaaccactgccaccccccaaccggatacagaaatcaagtaattttggatatatcaca
tcttgctacaaagctgtaaatagcaaagatgatctgccatattgccttcggaggatacat
ggttttcgtcttgttaacacaaagtgcatggtgttggttgatatgtggaaaaaaattcag
cattcaaatattgtaactctccgtgaagtgtttaccactaaagcatttgccgagccctct
cttgtgttcgcgtatgatttccatgctggaggagaaactatgatgagcagacactttaat
gacccaaattctgatgcctacttcacaaagagaaagtggggccagcatgacggaccactg
cccaggcagcatgctggattgttaccagagtctctcatctgggcatatatcgtccagctg
agttctgctctgcgtaccattcacacagcaggtttagcatgtagagtaatggacccaacg
aagattctgataaccagcaaaacaaggttacgagtaaattgtgtaggagtttttgatgtt
ttaacatttgataacagtcaaaataataatcctttggcgttaatggctcagtaccagcaa
gcagatctgatatcattaggaaaagttgtgttggctttggcttgcaactctttggcagga
attcagcgagaaaatttacagaaagccatggaattggtgacaatcaactactcctctgac
ctgaagaacctcatcttgtacttgttgactgaccaaaacaggatgcggagtgtgaatgac
atcatgcccatgattggcgctcggttttacactcaattggatgctgctcagatgagaaat
gatgttatcgaggaagaccttgctaaggaggttcaaaacggaagactgtttaggcttcta
gcaaaattgggaacaatcaacgagaggccggagttccagaaggatcccacctggtcagag
actggagaccggtatctgctgaaactctttcgggatcatctttttcatcaagtgacagaa
gcaggtgctccctggattgacctcagtcacatcatttcttgtcttaacaagctagatgct
ggtgtgccagaaaaaataagcctgatttccagggacgagaagagtgtgctggtggtgaca
tacagtgacctaaaacgctgctttgaaaatacctttcaagaactgattgcggctgcaaat
ggtaacgatcggaacagtaactga
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